|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:177122..178267- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000052-T2 ID=KJC3_000052-T2|Name=KJC3_000052-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1146bp|location=Sequence derived from alignment at JC14F:177122..178267- (Aspergillus niger KJC3)
TCCTAATTGAGCCTCGAGACATCTGGTACTGAAACCTGCTCCTTGAAGCC
AGACTTTGGCAATTCACGAGACAATGCAGGCTGAACTGAAGCAAAAAATC
GAGGAGAAAACTGTCAGCTACAGCTACACTGGATGTTTTGAATATCACTA
ATTTAATCGCAGCGGGCTTTCAACCGAGCTCTGGATAAACTGCATAACGA
CCAGGGAAGTCGGGAAAGTGTGACCGAGTCTGTGGTAACAGATGTTCTTC
ATAATACTAGATCAATTCCCAGACTAAACGTTCTCTAGCTCGAGTTGATT
AACGTGGTTTGGCCGATATCAGCACAAGAAGGGCATGATTCGACCAGCCT
TCGCCAAGTTATCCGTTATGTCTCGAACCTACTTCGCCCCGCTGACGAGG
ACGAGTTGCTGCCATCCCGCTCGACCCCTTCGCCGACGTGCAATAGCGTT
GATATGCTGTCGCCAGCTCATTTGTCACATGTGGAGAGAGATGGCGCGGA
GCACACGACCGCACGCGAAAAGAGCCCTCTAGATCGAGTGGATGGTCTTC
AGACGGGCCAAGTGGAGACAGATCTCCTGAACATGGCTATTTCATCTAGC
GACCTTGCCGCCATCTTCCCAGAAGACTTCTATGAACATATGCTTAATGA
CAATCTAAACTTGGCGTCTCAAAACTCTCAACCTCAGGGCTTCGGGACAT
TGATGGCAATGCCTGACAATATGGAAGACTCGGGTCTCGATTCACTTATG
CCAGGGGATGATCTTTCGTTGCTATCACAGCTGACTCCTCCGTTGGATGT
CAGTATGAGCATAGGCTTACAACCATATGCGTCCGAGTTCAGGGAGGCAT
GGTTGGCTGAGTTACTTTCAATGGCCTGTCCTGACTCGCCCGCAGGTCTG
GGGGCTTCCACGGACCTGAGCAATGAGTTTTCCCAAAGCTTGAATGGGCT
GGTGCCTGTCACACCTAACCTGTATGATCATCTTGATGAGAGCGAGGTCT
CCCCAGGACTATCGGCTTCCAGTGCCCCAACGTCAACCAGGATTGCGACC
AATGTGGACGACATTGCCACTGGCCTAGAGAACAAGGATTCGGAGCCTGA
GTTGCTTGAGCAGATAGCCAGATTGGATAGCTTTCCAACCGCATAG back to topCoding sequence (CDS) from alignment at JC14F:177122..178267- >KJC3_000052-T2 ID=KJC3_000052-T2|Name=KJC3_000052-T2|organism=Aspergillus niger KJC3|type=CDS|length=2907bp|location=Sequence derived from alignment at JC14F:177122..178267- (Aspergillus niger KJC3)
CTCGAGTTGATTAACGTGGTTTGGCCGATATCAGCACAAGAAGGGCATGA
TTCGACCAGCCTTCGCCAAGTTATCCGTTATGTCTCGAACCTACTTCGCC
CCGCTGACGAGGACGAGTTGCTGCCATCCCGCTCGACCCCTTCGCCGACG
TGCAATAGCGTTGATATGCTGTCGCCAGCTCATTTGTCACATGTGGAGAG
AGATGGCGCGGAGCACACGACCGCACGCGAAAAGAGCCCTCTAGATCGAG
TGGATGGTCTTCAGACGGGCCAAGTGGAGACAGATCTCCTGAACATGGCT
ATTTCATCTAGCGACCTTGCCGCCATCTTCCCAGAAGACTTCTATGAACA
TATGCTTAATGACAATCTAAACTTGGCGTCTCAAAACTCTCAACCTCAGG
GCTTCGGGACATTGATGGCAATGCCTGACAATATGGAAGACTCGGGTCTC
GATTCACTTATGCCAGGGGATGATCTTTCGTTGCTATCACAGCTGACTCC
TCCGTTGGATGTCAGTATGAGCATAGGCTTACAACCATATGCGTCCGAGT
TCAGGGAGGCATGGTTGGCTGAGTTACTTTCAATGGCCTGTCCTGACTCG
CCCGCAGGTCTGGGGGCTTCCACGGACCTGAGCAATGAGTTTTCCCAAAG
CTTGAATGGGCTGGTGCCTGTCACACCTAACCTGTATGATCATCTTGATG
AGAGCGAGGTCTCCCCAGGACTATCGGCTTCCAGTGCCCCAACGTCAACC
AGGATTGCGACCAATGTGGACGACATTGCCACTGGCCTAGAGAACAAGGA
TTCGGAGCCTGAGTTGCTTGAGCAGATAGCCAGATTGGATAGCTTTCCAA
CCGCATAGCGGGCTTTCAACCGAGCTCTGGATAAACTGCATAACGACCAG
GGAAGTCGGGAAAGTGTGACCGAGTCTGTGATGCAGGCTGAACTGAAGCA
AAAAATCGAGGAGAAAACTCTCGAGTTGATTAACGTGGTTTGGCCGATAT
CAGCACAAGAAGGGCATGATTCGACCAGCCTTCGCCAAGTTATCCGTTAT
GTCTCGAACCTACTTCGCCCCGCTGACGAGGACGAGTTGCTGCCATCCCG
CTCGACCCCTTCGCCGACGTGCAATAGCGTTGATATGCTGTCGCCAGCTC
ATTTGTCACATGTGGAGAGAGATGGCGCGGAGCACACGACCGCACGCGAA
AAGAGCCCTCTAGATCGAGTGGATGGTCTTCAGACGGGCCAAGTGGAGAC
AGATCTCCTGAACATGGCTATTTCATCTAGCGACCTTGCCGCCATCTTCC
CAGAAGACTTCTATGAACATATGCTTAATGACAATCTAAACTTGGCGTCT
CAAAACTCTCAACCTCAGGGCTTCGGGACATTGATGGCAATGCCTGACAA
TATGGAAGACTCGGGTCTCGATTCACTTATGCCAGGGGATGATCTTTCGT
TGCTATCACAGCTGACTCCTCCGTTGGATGTCAGTATGAGCATAGGCTTA
CAACCATATGCGTCCGAGTTCAGGGAGGCATGGTTGGCTGAGTTACTTTC
AATGGCCTGTCCTGACTCGCCCGCAGGTCTGGGGGCTTCCACGGACCTGA
GCAATGAGTTTTCCCAAAGCTTGAATGGGCTGGTGCCTGTCACACCTAAC
CTGTATGATCATCTTGATGAGAGCGAGGTCTCCCCAGGACTATCGGCTTC
CAGTGCCCCAACGTCAACCAGGATTGCGACCAATGTGGACGACATTGCCA
CTGGCCTAGAGAACAAGGATTCGGAGCCTGAGTTGCTTGAGCAGATAGCC
AGATTGGATAGCTTTCCAACCGCATAGCGGGCTTTCAACCGAGCTCTGGA
TAAACTGCATAACGACCAGGGAAGTCGGGAAAGTGTGACCGAGTCTGTGA
TGCAGGCTGAACTGAAGCAAAAAATCGAGGAGAAAACTCTCGAGTTGATT
AACGTGGTTTGGCCGATATCAGCACAAGAAGGGCATGATTCGACCAGCCT
TCGCCAAGTTATCCGTTATGTCTCGAACCTACTTCGCCCCGCTGACGAGG
ACGAGTTGCTGCCATCCCGCTCGACCCCTTCGCCGACGTGCAATAGCGTT
GATATGCTGTCGCCAGCTCATTTGTCACATGTGGAGAGAGATGGCGCGGA
GCACACGACCGCACGCGAAAAGAGCCCTCTAGATCGAGTGGATGGTCTTC
AGACGGGCCAAGTGGAGACAGATCTCCTGAACATGGCTATTTCATCTAGC
GACCTTGCCGCCATCTTCCCAGAAGACTTCTATGAACATATGCTTAATGA
CAATCTAAACTTGGCGTCTCAAAACTCTCAACCTCAGGGCTTCGGGACAT
TGATGGCAATGCCTGACAATATGGAAGACTCGGGTCTCGATTCACTTATG
CCAGGGGATGATCTTTCGTTGCTATCACAGCTGACTCCTCCGTTGGATGT
CAGTATGAGCATAGGCTTACAACCATATGCGTCCGAGTTCAGGGAGGCAT
GGTTGGCTGAGTTACTTTCAATGGCCTGTCCTGACTCGCCCGCAGGTCTG
GGGGCTTCCACGGACCTGAGCAATGAGTTTTCCCAAAGCTTGAATGGGCT
GGTGCCTGTCACACCTAACCTGTATGATCATCTTGATGAGAGCGAGGTCT
CCCCAGGACTATCGGCTTCCAGTGCCCCAACGTCAACCAGGATTGCGACC
AATGTGGACGACATTGCCACTGGCCTAGAGAACAAGGATTCGGAGCCTGA
GTTGCTTGAGCAGATAGCCAGATTGGATAGCTTTCCAACCGCATAGCGGG
CTTTCAACCGAGCTCTGGATAAACTGCATAACGACCAGGGAAGTCGGGAA
AGTGTGACCGAGTCTGTGATGCAGGCTGAACTGAAGCAAAAAATCGAGGA
GAAAACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000052-T2.utr5p1 | KJC3_000052-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC14F | supercontig | JC14F:177122..178267 - |
|
