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KJC3_000055-T1, KJC3_000055-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000055-T1
Unique NameKJC3_000055-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC14F:182556..184540-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000055-T1 ID=KJC3_000055-T1|Name=KJC3_000055-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1985bp|location=Sequence derived from alignment at JC14F:182556..184540- (Aspergillus niger KJC3)
ATGCCGCCGACACAGACAGCTGCCTCGTCGACAAGCGACCCTGTTGAAAA
GCCTCTACAGGATGCCACTGCCAGTGACCCGTCGGGGTCTGCAGATGCTG
TGACCGGGCGCAAGATCACGGGTGTTGCGTGGTTCGTTGTCAACATTGCT
CTGTTATCGGCGACTTTTCTGTATGCCCTCGACAATACCGTGACAGCAAC
GGTGCGGCCTGCCATTGTCAACAGATTTGGCAACCGCATAGACATGCTAC
CGTGGGTTTCAGTGGCATATCCAATGGGGGAAGTTGGCACCAACCCCATC
TGGTAAGATAATCAAGCAGCAGAGCGCACTTGGTGGATGGACTACTAACA
CTTCTGTTTACAGGGCGAAGCTCAACAAGTTCCTCAATGGTAAATTTGTC
TTTCTCGCCGCCCTGCTTATCTTCGAAGTAGGATCTGCGATTATTGGCTC
AGCGTCGTCCATTGGCGCTGTCATCGCGGGTCGCGCTCTGGCTGGCTCCG
GCGGCTCCGGTATCTACGTCGGCACCATTAGCATGATCACTGGAATGACG
ATGGCCAAAGAACAAAACCAGTATCTCAACATTGTGGGCATGGCGTGGGG
TCTGGGAACCATCCTGGGCCCCATTGTCGGATCTGCGTTTGCTGATTCGC
CTGCAACATGGCGATGGGCTTTTTACATCAACATCTGCATTGCCGCCGTT
GCCGCCCCCGCGTGTATCTGGATCATGCCTTCAGCGCCCCCTAGCGTGTG
TCTGGGGATTATGGACGTGATCAAGGCATTTGACCATCTGGGTGCTGTGC
TATTTCTTGGCTCGGTCGTGTCGACAGTCATGCTGCTGGGCTTTGGCGGC
GTCGTGTACAGCTGGGATAGCGGCGAGATGATTGGACTTTACGTTGCCAC
TGCTGTGCTATGGATCATGTTTGCTCTGCAGCAGAAATTCCACCTTTTCA
CATCAGATCGCATCTTCCCCGTGCAGTTCTTCAAGGATCCCTTGGTGGTC
GGCCTGTGGATCTGGACAATTGTCGCAATTTCTGACATTGTCGTCACCAT
CTACACGCTGCCGCTGTTTTCCCAGTTTGTGCTGCATGATTCCTCGATGC
GTTCTGCAGTCTACACGTTGCCATTTGTGGCATCCGTTGTGGTCAGTGCC
GGCATCAGCGGGGGACTTCTGGTCAAGTTCCCATGGTACAAGTGCTGGTT
CCTCTGGGCCGCTGCGCTGCTCCTTATCAGCAACGGCCTGCTGTCCAGCA
TCCACACGAGCACATCTAGGGCTGCCATTTGTGGCTATACCATCATCCAA
GGCTTCGGCGTCGGACCAGTCATTCAGCTTGGCTATACTGTGGGCCAGTT
GAAGCGTCCACAGGCGGCACGAAAAGACATCACGGCGTTCTTCTCTTGTG
CGCAGATGGGTGGTCTAGCATTGTCACTGGGCATCGCCACCTCTGTTCTT
GTCAACCATGCCACGCAGGAGATATCGCACATTCTACCAAACGTTCCTCT
TAGCAAAATCAGAGGCGCCATTGATGGAGTGGGAAGTAGCGTGTTCGCGA
CGTTGACCGAACAAGTTCGTGATCAGGTCACCAACGCAGTTACGCAGAGT
GTGGCCTCTGTGTTTTACCTGAATTTGTTTGGTGCGGCGCTTGGCTTCCT
CATTGCCCTTCCTCTCAAATTCGACAAGCTGGATTTCACCGGGCTGCAAT
AACACACTTCCTCGTCGAATCCAAGCGGATTTGGATTTACGCCATACTTT
ACTGTTAGCATGATACACTGTAATTATTCCAATCAAAATCAATCGCTCCC
AAGGTTATGTAAGTATCCTAAGGCTGCGGTACGGAAGGTGTATCATAGGA
AGGTGTGAGGTATAGTAAGATTTGGAATAGCAAATGGCAAGCAAGCGAGG
TGGCATTCATCAGTTAAGATAGCGCAGGGGCACGCTAGAGACCATCTCAC
CCGGCGTAACGCAATTTTACCCAGAATGAACCTAG
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Coding sequence (CDS) from alignment at JC14F:182556..184540-

>KJC3_000055-T1 ID=KJC3_000055-T1|Name=KJC3_000055-T1|organism=Aspergillus niger KJC3|type=CDS|length=3282bp|location=Sequence derived from alignment at JC14F:182556..184540- (Aspergillus niger KJC3)
GGCGAAGCTCAACAAGTTCCTCAATGGTAAATTTGTCTTTCTCGCCGCCC
TGCTTATCTTCGAAGTAGGATCTGCGATTATTGGCTCAGCGTCGTCCATT
GGCGCTGTCATCGCGGGTCGCGCTCTGGCTGGCTCCGGCGGCTCCGGTAT
CTACGTCGGCACCATTAGCATGATCACTGGAATGACGATGGCCAAAGAAC
AAAACCAGTATCTCAACATTGTGGGCATGGCGTGGGGTCTGGGAACCATC
CTGGGCCCCATTGTCGGATCTGCGTTTGCTGATTCGCCTGCAACATGGCG
ATGGGCTTTTTACATCAACATCTGCATTGCCGCCGTTGCCGCCCCCGCGT
GTATCTGGATCATGCCTTCAGCGCCCCCTAGCGTGTGTCTGGGGATTATG
GACGTGATCAAGGCATTTGACCATCTGGGTGCTGTGCTATTTCTTGGCTC
GGTCGTGTCGACAGTCATGCTGCTGGGCTTTGGCGGCGTCGTGTACAGCT
GGGATAGCGGCGAGATGATTGGACTTTACGTTGCCACTGCTGTGCTATGG
ATCATGTTTGCTCTGCAGCAGAAATTCCACCTTTTCACATCAGATCGCAT
CTTCCCCGTGCAGTTCTTCAAGGATCCCTTGGTGGTCGGCCTGTGGATCT
GGACAATTGTCGCAATTTCTGACATTGTCGTCACCATCTACACGCTGCCG
CTGTTTTCCCAGTTTGTGCTGCATGATTCCTCGATGCGTTCTGCAGTCTA
CACGTTGCCATTTGTGGCATCCGTTGTGGTCAGTGCCGGCATCAGCGGGG
GACTTCTGGTCAAGTTCCCATGGTACAAGTGCTGGTTCCTCTGGGCCGCT
GCGCTGCTCCTTATCAGCAACGGCCTGCTGTCCAGCATCCACACGAGCAC
ATCTAGGGCTGCCATTTGTGGCTATACCATCATCCAAGGCTTCGGCGTCG
GACCAGTCATTCAGCTTGGCTATACTGTGGGCCAGTTGAAGCGTCCACAG
GCGGCACGAAAAGACATCACGGCGTTCTTCTCTTGTGCGCAGATGGGTGG
TCTAGCATTGTCACTGGGCATCGCCACCTCTGTTCTTGTCAACCATGCCA
CGCAGGAGATATCGCACATTCTACCAAACGTTCCTCTTAGCAAAATCAGA
GGCGCCATTGATGGAGTGGGAAGTAGCGTGTTCGCGACGTTGACCGAACA
AGTTCGTGATCAGGTCACCAACGCAGTTACGCAGAGTGTGGCCTCTGTGT
TTTACCTGAATTTGTTTGGTGCGGCGCTTGGCTTCCTCATTGCCCTTCCT
CTCAAATTCGACAAGCTGGATTTCACCGGGCTGCAATAAATGCCGCCGAC
ACAGACAGCTGCCTCGTCGACAAGCGACCCTGTTGAAAAGCCTCTACAGG
ATGCCACTGCCAGTGACCCGTCGGGGTCTGCAGATGCTGTGACCGGGCGC
AAGATCACGGGTGTTGCGTGGTTCGTTGTCAACATTGCTCTGTTATCGGC
GACTTTTCTGTATGCCCTCGACAATACCGTGACAGCAACGGTGCGGCCTG
CCATTGTCAACAGATTTGGCAACCGCATAGACATGCTACCGTGGGTTTCA
GTGGCATATCCAATGGGGGAAGTTGGCACCAACCCCATCTGGGCGAAGCT
CAACAAGTTCCTCAATGGTAAATTTGTCTTTCTCGCCGCCCTGCTTATCT
TCGAAGTAGGATCTGCGATTATTGGCTCAGCGTCGTCCATTGGCGCTGTC
ATCGCGGGTCGCGCTCTGGCTGGCTCCGGCGGCTCCGGTATCTACGTCGG
CACCATTAGCATGATCACTGGAATGACGATGGCCAAAGAACAAAACCAGT
ATCTCAACATTGTGGGCATGGCGTGGGGTCTGGGAACCATCCTGGGCCCC
ATTGTCGGATCTGCGTTTGCTGATTCGCCTGCAACATGGCGATGGGCTTT
TTACATCAACATCTGCATTGCCGCCGTTGCCGCCCCCGCGTGTATCTGGA
TCATGCCTTCAGCGCCCCCTAGCGTGTGTCTGGGGATTATGGACGTGATC
AAGGCATTTGACCATCTGGGTGCTGTGCTATTTCTTGGCTCGGTCGTGTC
GACAGTCATGCTGCTGGGCTTTGGCGGCGTCGTGTACAGCTGGGATAGCG
GCGAGATGATTGGACTTTACGTTGCCACTGCTGTGCTATGGATCATGTTT
GCTCTGCAGCAGAAATTCCACCTTTTCACATCAGATCGCATCTTCCCCGT
GCAGTTCTTCAAGGATCCCTTGGTGGTCGGCCTGTGGATCTGGACAATTG
TCGCAATTTCTGACATTGTCGTCACCATCTACACGCTGCCGCTGTTTTCC
CAGTTTGTGCTGCATGATTCCTCGATGCGTTCTGCAGTCTACACGTTGCC
ATTTGTGGCATCCGTTGTGGTCAGTGCCGGCATCAGCGGGGGACTTCTGG
TCAAGTTCCCATGGTACAAGTGCTGGTTCCTCTGGGCCGCTGCGCTGCTC
CTTATCAGCAACGGCCTGCTGTCCAGCATCCACACGAGCACATCTAGGGC
TGCCATTTGTGGCTATACCATCATCCAAGGCTTCGGCGTCGGACCAGTCA
TTCAGCTTGGCTATACTGTGGGCCAGTTGAAGCGTCCACAGGCGGCACGA
AAAGACATCACGGCGTTCTTCTCTTGTGCGCAGATGGGTGGTCTAGCATT
GTCACTGGGCATCGCCACCTCTGTTCTTGTCAACCATGCCACGCAGGAGA
TATCGCACATTCTACCAAACGTTCCTCTTAGCAAAATCAGAGGCGCCATT
GATGGAGTGGGAAGTAGCGTGTTCGCGACGTTGACCGAACAAGTTCGTGA
TCAGGTCACCAACGCAGTTACGCAGAGTGTGGCCTCTGTGTTTTACCTGA
ATTTGTTTGGTGCGGCGCTTGGCTTCCTCATTGCCCTTCCTCTCAAATTC
GACAAGCTGGATTTCACCGGGCTGCAATAAATGCCGCCGACACAGACAGC
TGCCTCGTCGACAAGCGACCCTGTTGAAAAGCCTCTACAGGATGCCACTG
CCAGTGACCCGTCGGGGTCTGCAGATGCTGTGACCGGGCGCAAGATCACG
GGTGTTGCGTGGTTCGTTGTCAACATTGCTCTGTTATCGGCGACTTTTCT
GTATGCCCTCGACAATACCGTGACAGCAACGGTGCGGCCTGCCATTGTCA
ACAGATTTGGCAACCGCATAGACATGCTACCGTGGGTTTCAGTGGCATAT
CCAATGGGGGAAGTTGGCACCAACCCCATCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000055KJC3_000055Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000055-T1KJC3_000055-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000055-T1.cdsKJC3_000055-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000055-T1.utr3p1KJC3_000055-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000055-T1.exon2KJC3_000055-T1.exon2Aspergillus niger KJC3exon
KJC3_000055-T1.exon1KJC3_000055-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC14FsupercontigJC14F:182556..184540 -
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