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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:215507..216279- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000059-T1 ID=KJC3_000059-T1|Name=KJC3_000059-T1|organism=Aspergillus niger KJC3|type=mRNA|length=773bp|location=Sequence derived from alignment at JC14F:215507..216279- (Aspergillus niger KJC3)
ATGAGGTCTCTTGCCCCCGCCCTGCGTCCCAAAACTGCCGACAGCCCTAT
GCCATTCAACACGAATGTCTCTGTACCACCTATTTTTCCCAAACAAAAGG
CCTCAACTGCCTGTCGAGAGTGCAAGCGCATGAGATGCAAGGTAGTATCC
CTTCTTCTCCCTACCCATGTCTTCCTCTAATGTTAAGCTCGAGCTAGTGT
TCCGTCGGAAACGGAACCACGGTGTGTGACCGATGCATCAAAAACCAGAC
CCTGTGTGTCTTCGACCTGGACGAGGATATGCGACGGAAGCTATCCCACA
AGCGCAAACTTAATGAACTGGAAGCAGAGCGTGATTTCCTGCAGCAGCTG
GTGAATACGCTGCGCGACAGCTCCGATGACAAGGCCCTGCAGCTGCTGGG
TCTCATCCGCAGTCAAGCAACCGCTGCCGAATTACAGCTCTACATCAAAA
ATATCATGACCGATGGGGGTCGGCAGCAGAATCCCGTTTGGGCCGACATG
TACGACCGCACGCGATCGCCATCCAACACCATAGACTTCCATCGCCCATC
CCCGCATCGCGCTCTGACCATCAAGCGACTGCCCAGTCCTCCCGTCTATC
ACGTCCCCGCAGAGCCCTGGACGTCGGTCACCAAATCCGGTGATTTTGTA
TCATATCTGGTCTCACTCTGGCTTACGTGGAGTCAGCCTTTCCATAATTG
GATTGATCGCGACCTTTTCCTCCGCGATCTCAGACAGGGAATCTCAGTTC
TCAGTACTGTTCTCCGTTTCTGA back to topCoding sequence (CDS) from alignment at JC14F:215507..216279- >KJC3_000059-T1 ID=KJC3_000059-T1|Name=KJC3_000059-T1|organism=Aspergillus niger KJC3|type=CDS|length=1434bp|location=Sequence derived from alignment at JC14F:215507..216279- (Aspergillus niger KJC3)
TGTTCCGTCGGAAACGGAACCACGGTGTGTGACCGATGCATCAAAAACCA
GACCCTGTGTGTCTTCGACCTGGACGAGGATATGCGACGGAAGCTATCCC
ACAAGCGCAAACTTAATGAACTGGAAGCAGAGCGTGATTTCCTGCAGCAG
CTGGTGAATACGCTGCGCGACAGCTCCGATGACAAGGCCCTGCAGCTGCT
GGGTCTCATCCGCAGTCAAGCAACCGCTGCCGAATTACAGCTCTACATCA
AAAATATCATGACCGATGGGGGTCGGCAGCAGAATCCCGTTTGGGCCGAC
ATGTACGACCGCACGCGATCGCCATCCAACACCATAGACTTCCATCGCCC
ATCCCCGCATCGCGCTCTGACCATCAAGCGACTGCCCAGTCCTCCCGTCT
ATCACGTCCCCGCAGAGCCCTGGACGTCGGTCACCAAATCCGGTGATTTT
GTATCATATCTGGTCTCACTCTGGCTTACGTGGAGTCAGCCTTTCCATAA
TTGGATTGATCGCGACCTTTTCCTCCGCGATCTCAGACAGGGAATCTCAG
TTCTCAGTACTGTTCTCCGTTTCTGAATGAGGTCTCTTGCCCCCGCCCTG
CGTCCCAAAACTGCCGACAGCCCTATGCCATTCAACACGAATGTCTCTGT
ACCACCTATTTTTCCCAAACAAAAGGCCTCAACTGCCTGTCGAGAGTGCA
AGCGCATGAGATGCAAGTGTTCCGTCGGAAACGGAACCACGGTGTGTGAC
CGATGCATCAAAAACCAGACCCTGTGTGTCTTCGACCTGGACGAGGATAT
GCGACGGAAGCTATCCCACAAGCGCAAACTTAATGAACTGGAAGCAGAGC
GTGATTTCCTGCAGCAGCTGGTGAATACGCTGCGCGACAGCTCCGATGAC
AAGGCCCTGCAGCTGCTGGGTCTCATCCGCAGTCAAGCAACCGCTGCCGA
ATTACAGCTCTACATCAAAAATATCATGACCGATGGGGGTCGGCAGCAGA
ATCCCGTTTGGGCCGACATGTACGACCGCACGCGATCGCCATCCAACACC
ATAGACTTCCATCGCCCATCCCCGCATCGCGCTCTGACCATCAAGCGACT
GCCCAGTCCTCCCGTCTATCACGTCCCCGCAGAGCCCTGGACGTCGGTCA
CCAAATCCGGTGATTTTGTATCATATCTGGTCTCACTCTGGCTTACGTGG
AGTCAGCCTTTCCATAATTGGATTGATCGCGACCTTTTCCTCCGCGATCT
CAGACAGGGAATCTCAGTTCTCAGTACTGTTCTCCGTTTCTGAATGAGGT
CTCTTGCCCCCGCCCTGCGTCCCAAAACTGCCGACAGCCCTATGCCATTC
AACACGAATGTCTCTGTACCACCTATTTTTCCCAAACAAAAGGCCTCAAC
TGCCTGTCGAGAGTGCAAGCGCATGAGATGCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC14F | supercontig | JC14F:215507..216279 - |
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