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KJC3_000060-T1, KJC3_000060-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000060-T1
Unique NameKJC3_000060-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC14F:217457..218721+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000060-T1 ID=KJC3_000060-T1|Name=KJC3_000060-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1265bp|location=Sequence derived from alignment at JC14F:217457..218721+ (Aspergillus niger KJC3)
ATGGGTTGTGCAAATGGTTTCGCCCTCACCCCGCTTTGTGCGATGGAGGA
CGCGCTAGGGTCGTATCCCTTTGGTGTCGCGGCGCCCAACGAAACTTCCT
TTACCCTCGCGCCCGAAAACTTGGCCGTTGGAGAAATCACCAAGCCGCCC
TGGGTCCCCGAGAGCCCAAGGGAGGTTATTCCCCTGTCCTTTCGCCCGTC
TTCCCTGCTGGGTTTCGTGGACCGACCGGGCTTATATCCCTATCCGTCTT
CATCGTCTTCATCCCGCGAAGTACCGGGCTCAGCTGGCAAAGTTGCTATT
CCCCGCATAATGTGCGACAGCAGCAAGTCGCAAGTCCGGCGGTGCAGAAA
AGCCTGTGGACCATGTCGGCAGCGGAAGACCAAGTGTGACGGGAACAAAC
CGGTCTGCCGACCGTGTGTAGACCACAATGTCAGTTGTTTCTATACAGAT
GTTAAGCGGGTCCGCGACCGCAAGCAACTATCGGTCCTGCAGAGGAAAAT
CGAGCAATATGAGCAGCTGTTACATGATTTGGAGGAGGTTGACGGGAATG
TGGCTAGGCGTGTTCGAACGGCTCTCAGGGTAAGTCTCAGTGCGTGGCCA
TATGTCTCCTAGTCTCAGGCTCACTGCCTAAATCAAAAGGGTCCCGATAC
AACGTCTGCTACTGCTGATGACGGCGATTCTGACTCTTCGAATTCCTCAA
CCGGGTCGCTGAACGGGTTAGACTTAGTCCAGGAGGACTTGAACCGAAGC
AAAAAGTCCGTCGCTACCGGATTCTTTGGGAAAAACTCGGAGATAGCGTG
GATGCAGAGGCTTGAAGACGAAGCAAAGAATCGAAGCTGGAGGAAAGAGG
AATCACTGGGTTCCGAGGCCCGGGAGGCTGCCAGAAACCGACTGCCACTT
CCATGCTCGCAGAAGCGGGGAACAGAGATTTCAACAATCAATTTTTACTT
GGACGATATCAGTCTCCCGTTGTTGGACTCGGTTGATCCGTACGGACTTC
CCCCGACGGGTCTTGCTAACCAGTTTTTCACAGCGTACGTGGAGTCGGTC
CATCCTTCGTTCAACGTTGTCCGGAAGACGGCCTTTGTATTCCAGTACCA
GCGGTTCTTCAGTCAACCGATCCAACCCTCACGGCGTTGGCTGGCCATTC
TGAACATGATCATCGCTATTGGGTGCCGGTATTGTCAAGCCGTGAACGGC
CGAGCAGACGGCGATTACGACGATCTCGTGTATATGAATCGGGCGCGAAA
ACTGGCCCTGGGTGA
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Coding sequence (CDS) from alignment at JC14F:217457..218721+

>KJC3_000060-T1 ID=KJC3_000060-T1|Name=KJC3_000060-T1|organism=Aspergillus niger KJC3|type=CDS|length=3483bp|location=Sequence derived from alignment at JC14F:217457..218721+ (Aspergillus niger KJC3)
ATGGGTTGTGCAAATGGTTTCGCCCTCACCCCGCTTTGTGCGATGGAGGA
CGCGCTAGGGTCGTATCCCTTTGGTGTCGCGGCGCCCAACGAAACTTCCT
TTACCCTCGCGCCCGAAAACTTGGCCGTTGGAGAAATCACCAAGCCGCCC
TGGGTCCCCGAGAGCCCAAGGGAGGTTATTCCCCTGTCCTTTCGCCCGTC
TTCCCTGCTGGGTTTCGTGGACCGACCGGGCTTATATCCCTATCCGTCTT
CATCGTCTTCATCCCGCGAAGTACCGGGCTCAGCTGGCAAAGTTGCTATT
CCCCGCATAATGTGCGACAGCAGCAAGTCGCAAGTCCGGCGGTGCAGAAA
AGCCTGTGGACCATGTCGGCAGCGGAAGACCAAGTGTGACGGGAACAAAC
CGGTCTGCCGACCGTGTGTAGACCACAATGTCAGTTGTTTCTATACAGAT
GTTAAGCGGGTCCGCGACCGCAAGCAACTATCGGTCCTGCAGAGGAAAAT
CGAGCAATATGAGCAGCTGTTACATGATTTGGAGGAGGTTGACGGGAATG
TGGCTAGGCGTGTTCGAACGGCTCTCAGGGGTCCCGATACAACGTCTGCT
ACTGCTGATGACGGCGATTCTGACTCTTCGAATTCCTCAACCGGGTCGCT
GAACGGGTTAGACTTAGTCCAGGAGGACTTGAACCGAAGCAAAAAGTCCG
TCGCTACCGGATTCTTTGGGAAAAACTCGGAGATAGCGTGGATGCAGAGG
CTTGAAGACGAAGCAAAGAATCGAAGCTGGAGGAAAGAGGAATCACTGGG
TTCCGAGGCCCGGGAGGCTGCCAGAAACCGACTGCCACTTCCATGCTCGC
AGAAGCGGGGAACAGAGATTTCAACAATCAATTTTTACTTGGACGATATC
AGTCTCCCGTTGTTGGACTCGGTTGATCCCGTACGTGGAGTCGGTCCATC
CTTCGTTCAACGTTGTCCGGAAGACGGCCTTTGTATTCCAGTACCAGCGG
TTCTTCAGTCAACCGATCCAACCCTCACGGCGTTGGCTGGCCATTCTGAA
CATGATCATCGCTATTGGGTGCCGGTATTGTCAAGCCGTGAACGGCCGAG
CAGACGGCGATTACGACGATCTCGTGTATATGAATCGGGCGCGAAAACTG
GCCCTGGGTGAATGGGTTGTGCAAATGGTTTCGCCCTCACCCCGCTTTGT
GCGATGGAGGACGCGCTAGGGTCGTATCCCTTTGGTGTCGCGGCGCCCAA
CGAAACTTCCTTTACCCTCGCGCCCGAAAACTTGGCCGTTGGAGAAATCA
CCAAGCCGCCCTGGGTCCCCGAGAGCCCAAGGGAGGTTATTCCCCTGTCC
TTTCGCCCGTCTTCCCTGCTGGGTTTCGTGGACCGACCGGGCTTATATCC
CTATCCGTCTTCATCGTCTTCATCCCGCGAAGTACCGGGCTCAGCTGGCA
AAGTTGCTATTCCCCGCATAATGTGCGACAGCAGCAAGTCGCAAGTCCGG
CGGTGCAGAAAAGCCTGTGGACCATGTCGGCAGCGGAAGACCAAGTGTGA
CGGGAACAAACCGGTCTGCCGACCGTGTGTAGACCACAATGTCAGTTGTT
TCTATACAGATGTTAAGCGGGTCCGCGACCGCAAGCAACTATCGGTCCTG
CAGAGGAAAATCGAGCAATATGAGCAGCTGTTACATGATTTGGAGGAGGT
TGACGGGAATGTGGCTAGGCGTGTTCGAACGGCTCTCAGGGGTCCCGATA
CAACGTCTGCTACTGCTGATGACGGCGATTCTGACTCTTCGAATTCCTCA
ACCGGGTCGCTGAACGGGTTAGACTTAGTCCAGGAGGACTTGAACCGAAG
CAAAAAGTCCGTCGCTACCGGATTCTTTGGGAAAAACTCGGAGATAGCGT
GGATGCAGAGGCTTGAAGACGAAGCAAAGAATCGAAGCTGGAGGAAAGAG
GAATCACTGGGTTCCGAGGCCCGGGAGGCTGCCAGAAACCGACTGCCACT
TCCATGCTCGCAGAAGCGGGGAACAGAGATTTCAACAATCAATTTTTACT
TGGACGATATCAGTCTCCCGTTGTTGGACTCGGTTGATCCCGTACGTGGA
GTCGGTCCATCCTTCGTTCAACGTTGTCCGGAAGACGGCCTTTGTATTCC
AGTACCAGCGGTTCTTCAGTCAACCGATCCAACCCTCACGGCGTTGGCTG
GCCATTCTGAACATGATCATCGCTATTGGGTGCCGGTATTGTCAAGCCGT
GAACGGCCGAGCAGACGGCGATTACGACGATCTCGTGTATATGAATCGGG
CGCGAAAACTGGCCCTGGGTGAATGGGTTGTGCAAATGGTTTCGCCCTCA
CCCCGCTTTGTGCGATGGAGGACGCGCTAGGGTCGTATCCCTTTGGTGTC
GCGGCGCCCAACGAAACTTCCTTTACCCTCGCGCCCGAAAACTTGGCCGT
TGGAGAAATCACCAAGCCGCCCTGGGTCCCCGAGAGCCCAAGGGAGGTTA
TTCCCCTGTCCTTTCGCCCGTCTTCCCTGCTGGGTTTCGTGGACCGACCG
GGCTTATATCCCTATCCGTCTTCATCGTCTTCATCCCGCGAAGTACCGGG
CTCAGCTGGCAAAGTTGCTATTCCCCGCATAATGTGCGACAGCAGCAAGT
CGCAAGTCCGGCGGTGCAGAAAAGCCTGTGGACCATGTCGGCAGCGGAAG
ACCAAGTGTGACGGGAACAAACCGGTCTGCCGACCGTGTGTAGACCACAA
TGTCAGTTGTTTCTATACAGATGTTAAGCGGGTCCGCGACCGCAAGCAAC
TATCGGTCCTGCAGAGGAAAATCGAGCAATATGAGCAGCTGTTACATGAT
TTGGAGGAGGTTGACGGGAATGTGGCTAGGCGTGTTCGAACGGCTCTCAG
GGGTCCCGATACAACGTCTGCTACTGCTGATGACGGCGATTCTGACTCTT
CGAATTCCTCAACCGGGTCGCTGAACGGGTTAGACTTAGTCCAGGAGGAC
TTGAACCGAAGCAAAAAGTCCGTCGCTACCGGATTCTTTGGGAAAAACTC
GGAGATAGCGTGGATGCAGAGGCTTGAAGACGAAGCAAAGAATCGAAGCT
GGAGGAAAGAGGAATCACTGGGTTCCGAGGCCCGGGAGGCTGCCAGAAAC
CGACTGCCACTTCCATGCTCGCAGAAGCGGGGAACAGAGATTTCAACAAT
CAATTTTTACTTGGACGATATCAGTCTCCCGTTGTTGGACTCGGTTGATC
CCGTACGTGGAGTCGGTCCATCCTTCGTTCAACGTTGTCCGGAAGACGGC
CTTTGTATTCCAGTACCAGCGGTTCTTCAGTCAACCGATCCAACCCTCAC
GGCGTTGGCTGGCCATTCTGAACATGATCATCGCTATTGGGTGCCGGTAT
TGTCAAGCCGTGAACGGCCGAGCAGACGGCGATTACGACGATCTCGTGTA
TATGAATCGGGCGCGAAAACTGGCCCTGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000060KJC3_000060Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000060-T1.exon1KJC3_000060-T1.exon1Aspergillus niger KJC3exon
KJC3_000060-T1.exon2KJC3_000060-T1.exon2Aspergillus niger KJC3exon
KJC3_000060-T1.exon3KJC3_000060-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000060-T1.cdsKJC3_000060-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000060-T1KJC3_000060-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC14FsupercontigJC14F:217457..218721 +
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