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KJC3_000082-T1, KJC3_000082-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000082-T1
Unique NameKJC3_000082-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:108810..110069-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000082-T1 ID=KJC3_000082-T1|Name=KJC3_000082-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1260bp|location=Sequence derived from alignment at JC15F:108810..110069- (Aspergillus niger KJC3)
ATGCAATCTGCTAGCAGACATTTGCTACAGCTTCCCGTCGAAATCTTGGA
GATAATCACGCTCCAGCTAGAGTACGCCTATGAGATCAATTCCCTCTCAC
AAACCTGTCGACGGCTGTACAACATTGCCAACAATCATCTTTTCCGATGT
TATGCCAAAGAGTGTTCTCCGAGGGGACTAGAACGCGTCGTGAAGAACAA
CAACGCACGCGCACTATACAAGCTCCTGACCAATGGACTTAATTTCGATC
AATACTTCTGTACAACGGGGCATGCAACACCAATCATGTTGACTGTCGAA
AAGGATCTCTCGAAAATTGCAGACCTGCTGGTAGCCTATAGCGAGGTCTG
CTTAAAAAGCGATCGATGCAAATACGGTTTATCGGTCCGCGGCCCAGGCC
ACAGAGAATACGAGGATGATCTCGAGGGGGCGCTCTACCGCGCCGCCATC
AAGGGCAGCCTGGGTGTCACGAAGGTGCTTGTATCTTCTACGGGAGTAAA
AAAGTGGCAAAAGTCATGGGCTCTAGCATATGCGGTTAGTCGGGGCCAAC
TGGCCTTGGCTAGGTACTTGATAGAAGAAGGAGGAGTTGATGTCAACCAG
AAGATTAATCGCACCGGATTTTTCGAATCATTCCTCGCACAGGCTGCTTA
TCAGGGGAACCTGCAGATGGTAGAGCTTCTCGTGATGGCTGGTGCTAACG
TCAATAATCCGGGATTATCGCGCATTACAGAGTGTCCACTATATGTCGCT
GCTGCCAGAAACCACGCAGTAGTGCAGTATCTAATCGAAAAGGGAATGCG
GTTCCATTCCGTGGGATTTTCTGACACTCTGCATTTGGCAGAATATTTCA
ACTTACCGGACTACACGATCTCAAATGTTGTTAAGAGCGTTGACTTAAGT
GCAATAATAGCTGGTCCCGAATTTCAACGCTGCGGGGGCTACGCCAGAAG
CTGTGTCTATGACGTGGTTGCAGCTTGCAATGATCTACCGGTCTACCGTG
AAGCTTGGAATATGCGAGATTCACCCCATGATTGGCGGCATCTAGCAGGA
AGCTTTGGGACCGCCGTACTTCATGGAAACTTGACAGTGGCGCGATATAT
AGTCGACGAAATGACAAAGTTGCCAGGAATGGTTTGGGAACACGAATGGC
GGGAGCTCGTCCGTTACACAACGTTCTACTACGACAGTGCCCCGCCTTTG
ATATATTGCTGGATTGTGGGCCACCAGCCGATCTACCAGAAGGTAGAAAA
AATTGGTTAA
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Coding sequence (CDS) from alignment at JC15F:108810..110069-

>KJC3_000082-T1 ID=KJC3_000082-T1|Name=KJC3_000082-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at JC15F:108810..110069- (Aspergillus niger KJC3)
ATGCAATCTGCTAGCAGACATTTGCTACAGCTTCCCGTCGAAATCTTGGA
GATAATCACGCTCCAGCTAGAGTACGCCTATGAGATCAATTCCCTCTCAC
AAACCTGTCGACGGCTGTACAACATTGCCAACAATCATCTTTTCCGATGT
TATGCCAAAGAGTGTTCTCCGAGGGGACTAGAACGCGTCGTGAAGAACAA
CAACGCACGCGCACTATACAAGCTCCTGACCAATGGACTTAATTTCGATC
AATACTTCTGTACAACGGGGCATGCAACACCAATCATGTTGACTGTCGAA
AAGGATCTCTCGAAAATTGCAGACCTGCTGGTAGCCTATAGCGAGGTCTG
CTTAAAAAGCGATCGATGCAAATACGGTTTATCGGTCCGCGGCCCAGGCC
ACAGAGAATACGAGGATGATCTCGAGGGGGCGCTCTACCGCGCCGCCATC
AAGGGCAGCCTGGGTGTCACGAAGGTGCTTGTATCTTCTACGGGAGTAAA
AAAGTGGCAAAAGTCATGGGCTCTAGCATATGCGGTTAGTCGGGGCCAAC
TGGCCTTGGCTAGGTACTTGATAGAAGAAGGAGGAGTTGATGTCAACCAG
AAGATTAATCGCACCGGATTTTTCGAATCATTCCTCGCACAGGCTGCTTA
TCAGGGGAACCTGCAGATGGTAGAGCTTCTCGTGATGGCTGGTGCTAACG
TCAATAATCCGGGATTATCGCGCATTACAGAGTGTCCACTATATGTCGCT
GCTGCCAGAAACCACGCAGTAGTGCAGTATCTAATCGAAAAGGGAATGCG
GTTCCATTCCGTGGGATTTTCTGACACTCTGCATTTGGCAGAATATTTCA
ACTTACCGGACTACACGATCTCAAATGTTGTTAAGAGCGTTGACTTAAGT
GCAATAATAGCTGGTCCCGAATTTCAACGCTGCGGGGGCTACGCCAGAAG
CTGTGTCTATGACGTGGTTGCAGCTTGCAATGATCTACCGGTCTACCGTG
AAGCTTGGAATATGCGAGATTCACCCCATGATTGGCGGCATCTAGCAGGA
AGCTTTGGGACCGCCGTACTTCATGGAAACTTGACAGTGGCGCGATATAT
AGTCGACGAAATGACAAAGTTGCCAGGAATGGTTTGGGAACACGAATGGC
GGGAGCTCGTCCGTTACACAACGTTCTACTACGACAGTGCCCCGCCTTTG
ATATATTGCTGGATTGTGGGCCACCAGCCGATCTACCAGAAGGTAGAAAA
AATTGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000082KJC3_000082Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000082-T1.cdsKJC3_000082-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000082-T1.exon1KJC3_000082-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000082-T1KJC3_000082-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefInterPro:IPR001810
DBxrefPFAM:PF00646
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:108810..110069 -
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