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KJC3_000085-T1, KJC3_000085-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000085-T1
Unique NameKJC3_000085-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:133405..135743-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000085-T1 ID=KJC3_000085-T1|Name=KJC3_000085-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2339bp|location=Sequence derived from alignment at JC15F:133405..135743- (Aspergillus niger KJC3)
TAAGCTTCAATGCCCCCACGGGATTCCATTACCATAGTCTCCAAAAGGTC
CTTGCAAACCAGCGCAACCGTGATGCGTGACGAGTTTACAAATCAAAAGG
AGCATTTCACTGGGTATCGGTGGTCCTACTTCACTTCTCTAAGCGATGGG
CCCCTAAGATCACGGGCGCAAAGGTTCCTGGAATCTATTAACTGGACTTC
ACTTATCCAATGTGCCTCTGAGAAGAGGAATGGGCTGGATTGCCGGTTAC
TACCGGAAATTGGTCTGGGATACAATCATGTGGTTCGAGTTGTCGAATTC
GCAGACCACACACAATGGGTGGCACGACTCCGGATGCCACCTCTGACAGA
AAAGGACGACGAAGCAGCAAATGCATGGGAAATAATGGAGAGCGAGTGCA
GGACGATGTGCCTTGTTCAGAGAGAGAGCAAAATTCCTATTCCACATGTC
TATCTATTCGAGGCCAACCCACACTCCAGTGTTGGGGCACAGTTTATGCT
GATGGACTGCCTCAGAGGGAATGTCGGGATAGACATGAGCATAAACCTTC
CCCCTGAGCACAAGTTAGATGTTTACGCCAAAATGGCCGAAATTCAGGTA
TTTAATCGCACCGCTACGCATATTACTGTTCTAATGTATTATTGCCTAGA
TTGATCTGCTTAATATTCGATTGCCGAAAATTGGGAAACTTGTCGGGATG
AATGAGGATGGGACCTACCGGCAAGGTCCGTTACCAACCCTTGGGGGTCC
GTTCGACACTGCGGCGGACTTTTTCAGAGCCTGGTCTACTAAAGTAGGAT
TTGGTCTCTCCGAGGGTGAACTTCGAGACGCAGCGGGCCCATATGCCGAC
GAGATATTAAATTCTCTATCTACGTTTAGAAAATGGGTGAATGATAACGC
GGAGTGCCTGTCAGTCAATAACACAGGACCATTTCCCTTATGTCATGGCG
ACTTTGGTCATAACAACATCGTATTTGACGATAGATACCGCTTGCTTGGT
GTTATTGATTGGGAGACAGCATTTGCCGGGCCATACGAAGTATCATGTGA
ATTTCCTCTGTCTATTTCGGTGGTTCCGCCTGCTATGGATGTTCCATGGA
AGTATGATGAGACTGGCTGTCCGAAAGACCAGGAAGATAGGCAGAAATTC
GCCGACAGGGCAAGTTACGTTGCCATTGTGCGACAAAAGGAAGAGGAACG
TGGGTTAACCGAAGGATATTCGTTGTCAGCTGCCCTTGAAGATTCTCAAC
GGCAGTTCGTGACTTCGGCGATGAGATTGTATCAGAGTGGAAAACCCGGG
TGGTATTCCAAGGTGGCGGAAGAATTCGCCAAAGGTCGGGGGCTTATGGC
ATCGCCTAAGTGACATATCTCTTCTTTGACTTTTCTTCGAGTTCTGCGAT
GAGAAGTTCCAATTGTTTTCTGCGTATATAATGAATCTTTGTCGGTTTTC
CCGACCACGGCGGACATTCCGCTCTCTGTAGCATGGGCTTGAAAGACCCT
GAATCACTGAGGAACCATGTACAATCATTCAGTGAGCAACCAACGGGAGC
CGGCTCAGAGCTTGCCGCAGAGCCCTTTAAGTCATGGACTTTGGAGGACA
AGTATCTACACGCCATGGGTAAGTATAGAAGAGCAGGTGTCTCGGAAATA
TGCTGGATTATGAAGATCCAATATTTTTCCAGCGGCATATCTCAGTTGCT
ATATCAAAAAGAATGACGTGTTGCGGCGTACGCAAGCTAGCGCGTGACCC
GGAAAACAAAATATCAAAAATCGTGGACTGCCAGCGATGAAAATTGTCCA
TCGTAAAATTCCGCATGACCAACCAATTTCGTTCAGTTCTGCATACCACA
AGAGCATACGGTCCCGCGTCTCACCTCCCGTCCACAGCCCAGCCTGCTGC
ATGTGGTATAAACACTGGAGAGGTCAAGGGGACCGAGGACTTTATCCACA
ACCATGTTGACGAGGTTCAACTTCCTGTGTCAGCCAATGCCTGGGAATCT
TTTATGGGAGGGGTAAATATGCATGCTTACCGGAGGAAAGAAAAAGGCTT
GCGGATTGGGCGTGATGATTGATGCTTTCGACCAGCTTCATCAACAAATG
TGAGTATAAGCCATCCGGATGTTCTCTACTAGGGTGGATTTAATGAGCGT
ACCAGGAGATGTGCTTGAAGGCAATGTGTTCTGTCTCCCTACGGACCTGG
GATAATCTGAGGTTTAAGACCTGAAGGTAGCATCTTTAGATCGAAGCATA
TGTCTCGAGATCTACTTCGATATCGGTGGTCTCGGCAGGCGTCACATAAT
CAGTGGATACAAGATTTTTGTCCAATTGGAACTCGAGAG
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Coding sequence (CDS) from alignment at JC15F:133405..135743-

>KJC3_000085-T1 ID=KJC3_000085-T1|Name=KJC3_000085-T1|organism=Aspergillus niger KJC3|type=CDS|length=2604bp|location=Sequence derived from alignment at JC15F:133405..135743- (Aspergillus niger KJC3)
ATTGATCTGCTTAATATTCGATTGCCGAAAATTGGGAAACTTGTCGGGAT
GAATGAGGATGGGACCTACCGGCAAGGTCCGTTACCAACCCTTGGGGGTC
CGTTCGACACTGCGGCGGACTTTTTCAGAGCCTGGTCTACTAAAGTAGGA
TTTGGTCTCTCCGAGGGTGAACTTCGAGACGCAGCGGGCCCATATGCCGA
CGAGATATTAAATTCTCTATCTACGTTTAGAAAATGGGTGAATGATAACG
CGGAGTGCCTGTCAGTCAATAACACAGGACCATTTCCCTTATGTCATGGC
GACTTTGGTCATAACAACATCGTATTTGACGATAGATACCGCTTGCTTGG
TGTTATTGATTGGGAGACAGCATTTGCCGGGCCATACGAAGTATCATGTG
AATTTCCTCTGTCTATTTCGGTGGTTCCGCCTGCTATGGATGTTCCATGG
AAGTATGATGAGACTGGCTGTCCGAAAGACCAGGAAGATAGGCAGAAATT
CGCCGACAGGGCAAGTTACGTTGCCATTGTGCGACAAAAGGAAGAGGAAC
GTGGGTTAACCGAAGGATATTCGTTGTCAGCTGCCCTTGAAGATTCTCAA
CGGCAGTTCGTGACTTCGGCGATGAGATTGTATCAGAGTGGAAAACCCGG
GTGGTATTCCAAGGTGGCGGAAGAATTCGCCAAAGGTCGGGGGCTTATGG
CATCGCCTAAGTGAATGCCCCCACGGGATTCCATTACCATAGTCTCCAAA
AGGTCCTTGCAAACCAGCGCAACCGTGATGCGTGACGAGTTTACAAATCA
AAAGGAGCATTTCACTGGGTATCGGTGGTCCTACTTCACTTCTCTAAGCG
ATGGGCCCCTAAGATCACGGGCGCAAAGGTTCCTGGAATCTATTAACTGG
ACTTCACTTATCCAATGTGCCTCTGAGAAGAGGAATGGGCTGGATTGCCG
GTTACTACCGGAAATTGGTCTGGGATACAATCATGTGGTTCGAGTTGTCG
AATTCGCAGACCACACACAATGGGTGGCACGACTCCGGATGCCACCTCTG
ACAGAAAAGGACGACGAAGCAGCAAATGCATGGGAAATAATGGAGAGCGA
GTGCAGGACGATGTGCCTTGTTCAGAGAGAGAGCAAAATTCCTATTCCAC
ATGTCTATCTATTCGAGGCCAACCCACACTCCAGTGTTGGGGCACAGTTT
ATGCTGATGGACTGCCTCAGAGGGAATGTCGGGATAGACATGAGCATAAA
CCTTCCCCCTGAGCACAAGTTAGATGTTTACGCCAAAATGGCCGAAATTC
AGATTGATCTGCTTAATATTCGATTGCCGAAAATTGGGAAACTTGTCGGG
ATGAATGAGGATGGGACCTACCGGCAAGGTCCGTTACCAACCCTTGGGGG
TCCGTTCGACACTGCGGCGGACTTTTTCAGAGCCTGGTCTACTAAAGTAG
GATTTGGTCTCTCCGAGGGTGAACTTCGAGACGCAGCGGGCCCATATGCC
GACGAGATATTAAATTCTCTATCTACGTTTAGAAAATGGGTGAATGATAA
CGCGGAGTGCCTGTCAGTCAATAACACAGGACCATTTCCCTTATGTCATG
GCGACTTTGGTCATAACAACATCGTATTTGACGATAGATACCGCTTGCTT
GGTGTTATTGATTGGGAGACAGCATTTGCCGGGCCATACGAAGTATCATG
TGAATTTCCTCTGTCTATTTCGGTGGTTCCGCCTGCTATGGATGTTCCAT
GGAAGTATGATGAGACTGGCTGTCCGAAAGACCAGGAAGATAGGCAGAAA
TTCGCCGACAGGGCAAGTTACGTTGCCATTGTGCGACAAAAGGAAGAGGA
ACGTGGGTTAACCGAAGGATATTCGTTGTCAGCTGCCCTTGAAGATTCTC
AACGGCAGTTCGTGACTTCGGCGATGAGATTGTATCAGAGTGGAAAACCC
GGGTGGTATTCCAAGGTGGCGGAAGAATTCGCCAAAGGTCGGGGGCTTAT
GGCATCGCCTAAGTGAATGCCCCCACGGGATTCCATTACCATAGTCTCCA
AAAGGTCCTTGCAAACCAGCGCAACCGTGATGCGTGACGAGTTTACAAAT
CAAAAGGAGCATTTCACTGGGTATCGGTGGTCCTACTTCACTTCTCTAAG
CGATGGGCCCCTAAGATCACGGGCGCAAAGGTTCCTGGAATCTATTAACT
GGACTTCACTTATCCAATGTGCCTCTGAGAAGAGGAATGGGCTGGATTGC
CGGTTACTACCGGAAATTGGTCTGGGATACAATCATGTGGTTCGAGTTGT
CGAATTCGCAGACCACACACAATGGGTGGCACGACTCCGGATGCCACCTC
TGACAGAAAAGGACGACGAAGCAGCAAATGCATGGGAAATAATGGAGAGC
GAGTGCAGGACGATGTGCCTTGTTCAGAGAGAGAGCAAAATTCCTATTCC
ACATGTCTATCTATTCGAGGCCAACCCACACTCCAGTGTTGGGGCACAGT
TTATGCTGATGGACTGCCTCAGAGGGAATGTCGGGATAGACATGAGCATA
AACCTTCCCCCTGAGCACAAGTTAGATGTTTACGCCAAAATGGCCGAAAT
TCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000085KJC3_000085Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000085-T1KJC3_000085-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000085-T1.cdsKJC3_000085-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000085-T1.utr3p2KJC3_000085-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_000085-T1.utr3p1KJC3_000085-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000085-T1.exon3KJC3_000085-T1.exon3Aspergillus niger KJC3exon
KJC3_000085-T1.exon2KJC3_000085-T1.exon2Aspergillus niger KJC3exon
KJC3_000085-T1.exon1KJC3_000085-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000085-T1.utr5p1KJC3_000085-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR002575
DBxrefPFAM:PF01636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:133405..135743 -
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