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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:158052..159758- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000088-T2 ID=KJC3_000088-T2|Name=KJC3_000088-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1707bp|location=Sequence derived from alignment at JC15F:158052..159758- (Aspergillus niger KJC3)
CGGTATCCCGCCTGGCAGATTCGGAGGGACCAGAAAGTTTACTGACCCAA
TCATACATTGACTTCAGAATTAGAAAGCCGACTACTATGTTGTTAACTAT
ATACTGGCTCCTGGCTCTCCCGGCCGGCATCCCACACAGAGGATTAACAA
GCATGCATCACTGTCGAGGCGGTCTGGCCTTATAGATGGGTCGACGTACT
TCTTTCCATGCGCTGTCTGTTCTCACAGGCTATTTATTGATGCTCTAATA
CGTGCTTGGGCTGCTTTATTCCTTCCATGATGCTGTGAGTTTATGCTATT
TAACTTATCGTCCGAATTTGGAGCAAGTGATAAGGCCGCAGGGCCACACA
GGAGCACTTGAATCCAGTCAGAATTTTACCGGGTAGACCCTGACCAACTA
TTCTTAATCATTCAACGATATGTATCTTCCAGCAGAGATAATTGACCTTG
TATGATTTGTGACAGTCCAACTCTGCGCCACTACTGAATGTTTTCTTGGG
CAGGTTATGTTTTATGTCGAGATCGACACTTCGCAATCGTCAAAAATATC
GGCTGCTCGGGCGTTTCGCATAATGAACAATAACAGCCGGATAACTCTGG
CTAAATTACGCTTGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGT
CTGTTCCGACATATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCC
CTTGCCATCCTTAGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCC
AATATGTGCGCCAAGTCGACATTGGATACGGCTCCTTCCCATATTCGATA
GAGGATGTTACGTCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATG
CTTGCGTCAATTTTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCAT
TGGCCTCCTTATCCCATTATAGGATGAAGGCATCCATCGACCCGATATAC
ATGTCGTTGTGCTACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCA
GTTACCAATGACGAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCA
CATTGCGGATCCCGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGA
TTGCATGTCTATGCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTC
GAGGATCGTCGAGCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCA
CAAACTATCTGAGTATTGATTGTCTCAGACTCGGCCCGGCGGTTCGTCTG
CGGTTTTTATCCTTGCATAAAGTGAAAATTTCATCTCAAATTCTCATCAA
TGTGATTGAGCAATGTACTGAGTCGATGCAGTATATTGAGTTAAGGCAGG
TGAAGATCGAGTCTAGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGT
TTACCCTATCTATATGACTTTGACATATCTGTTGGCGAGACTCCCATAAG
AAGCGAGAGGTTTCATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATAC
AAGACCTCGGATTGTCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAA
AAAAAGGTAAAATTGAAACGAGGCGTTCCTCGGCATTTCAGCTACTGAAT
ATGGTCCTTCTGTAGCACTTTGACGATCGCGTGTGGAGAATGGAGACACA
TACTGTCCTCAATGGCTGGTTTACTCTATTTAAATGACTTTGACACATCT
ACTTGGC back to topCoding sequence (CDS) from alignment at JC15F:158052..159758- >KJC3_000088-T2 ID=KJC3_000088-T2|Name=KJC3_000088-T2|organism=Aspergillus niger KJC3|type=CDS|length=2244bp|location=Sequence derived from alignment at JC15F:158052..159758- (Aspergillus niger KJC3)
CACTTTGACGATCGCGTGTGGAGAATGGAGACACATACTGTCCTCAATGG
CTGGTTTACTCTATTTAAATGAATGTTTTATGTCGAGATCGACACTTCGC
AATCGTCAAAAATATCGGCTGCTCGGGCGTTTCGCATAATGAACAATAAC
AGCCGGATAACTCTGGCTAAATTACGCTTGGTTAACAGAACCTTTTGTCA
TTGTGCGTCAGCCCGTCTGTTCCGACATATTATAGCTGTAGCCGATTCGT
CATACCACACCGCTCCCTTGCCATCCTTAGGAAGGTTGGTGAACCTTTCC
AACAGCCCATATGCCCAATATGTGCGCCAAGTCGACATTGGATACGGCTC
CTTCCCATATTCGATAGAGGATGTTACGTCATATACGGTAGATCTTGCCG
GTTTGCTGTCTTCATGCTTGCGTCAATTTTCAAATCTCCAAGCTCTCGAT
TTCCGTGGTCCGCCATTGGCCTCCTTATCCCATTATAGGATGAAGGCATC
CATCGACCCGATATACATGTCGTTGTGCTACGTGCCTCTGCCAAACTTGA
CAGAACTTGAACTTCAGTTACCAATGACGAATGATTTTGCTCCATTGTTT
CCCGAGAATAGCAGCACATTGCGGATCCCGATTGAACAGATTCTCAACCG
CCTGCAATATCTTGGATTGCATGTCTATGCGCAGACAAACCAGCAATCCC
ATGCTTATCATTTTTCGAGGATCGTCGAGCTTTCGACAAGCCTGACTTCT
CTCTCAATCAGCAGCACAAACTATCTGAGTATTGATTGTCTCAGACTCGG
CCCGGCGGTTCGTCTGCGGTTTTTATCCTTGCATAAAGTGAAAATTTCAT
CTCAAATTCTCATCAATGTGATTGAGCAATGTACTGAGTCGATGCAGTAT
ATTGAGTTAAGGCAGGTGAAGATCGAGTCTAGCGCGTGGAGAGAAATTCT
GTCCGCAATGGATAGTTTACCCTATCTATATGACTTTGACATATCTGTTG
GCGAGACTCCCATAAGAAGCGAGAGGTTTCATTCGCCTCCACCGCTGTTT
TTTGCAGAGAATATACAAGACCTCGGATTGTCTGGGCTCGATCTTGTTGC
GTTTATAAATCTCAAAAAAAAGCACTTTGACGATCGCGTGTGGAGAATGG
AGACACATACTGTCCTCAATGGCTGGTTTACTCTATTTAAATGAATGTTT
TATGTCGAGATCGACACTTCGCAATCGTCAAAAATATCGGCTGCTCGGGC
GTTTCGCATAATGAACAATAACAGCCGGATAACTCTGGCTAAATTACGCT
TGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGTCTGTTCCGACAT
ATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCCCTTGCCATCCTT
AGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCCAATATGTGCGCC
AAGTCGACATTGGATACGGCTCCTTCCCATATTCGATAGAGGATGTTACG
TCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATGCTTGCGTCAATT
TTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCATTGGCCTCCTTAT
CCCATTATAGGATGAAGGCATCCATCGACCCGATATACATGTCGTTGTGC
TACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCAGTTACCAATGAC
GAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCACATTGCGGATCC
CGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGATTGCATGTCTAT
GCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTCGAGGATCGTCGA
GCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCACAAACTATCTGA
GTATTGATTGTCTCAGACTCGGCCCGGCGGTTCGTCTGCGGTTTTTATCC
TTGCATAAAGTGAAAATTTCATCTCAAATTCTCATCAATGTGATTGAGCA
ATGTACTGAGTCGATGCAGTATATTGAGTTAAGGCAGGTGAAGATCGAGT
CTAGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGTTTACCCTATCTA
TATGACTTTGACATATCTGTTGGCGAGACTCCCATAAGAAGCGAGAGGTT
TCATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATACAAGACCTCGGAT
TGTCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAAAAAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000088-T2.utr3p1 | KJC3_000088-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000088-T2.utr5p1 | KJC3_000088-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:158052..159758 - |
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