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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:158052..159758- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000088-T3 ID=KJC3_000088-T3|Name=KJC3_000088-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1707bp|location=Sequence derived from alignment at JC15F:158052..159758- (Aspergillus niger KJC3)
CGGTATCCCGCCTGGCAGATTCGGAGGGACCAGAAAGTTTACTGACCCAA
TCATACATTGACTTCAGAATTAGAAAGCCGACTACTATGTTGTTAACTAT
ATACTGGCTCCTGGCTCTCCCGGCCGGCATCCCACACAGAGGATTAACAA
GCATGCATCACTGTCGAGGCGGTCTGGCCTTATAGATGGGTCGACGTACT
TCTTTCCATGCGCTGTCTGTTCTCACAGGCTATTTATTGATGCTCTAATA
CGTGCTTGGGCTGCTTTATTCCTTCCATGATGCTGTGAGTTTATGCTATT
TAACTTATCGTCCGAATTTGGAGCAAGTGATAAGGCCGCAGGGCCACACA
GGAGCACTTGAATCCAGTCAGAATTTTACCGGGTAGACCCTGACCAACTA
TTCTTAATCATTCAACGATATGTATCTTCCAGCAGAGATAATTGACCTTG
TATGATTTGTGACAGTCCAACTCTGCGCCACTACTGAATGTTTTCTTGGG
CAGGTTATGTTTTATGTCGAGATCGACACTTCGCAATCGTCAAAAATATC
GGCTGCTCGGGCGTTTCGCATAATGAACAATAACAGCCGGATAACTCTGG
CTAAATTACGCTTGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGT
CTGTTCCGACATATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCC
CTTGCCATCCTTAGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCC
AATATGTGCGCCAAGTCGACATTGGATACGGCTCCTTCCCATATTCGATA
GAGGATGTTACGTCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATG
CTTGCGTCAATTTTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCAT
TGGCCTCCTTATCCCATTATAGGATGAAGGCATCCATCGACCCGATATAC
ATGTCGTTGTGCTACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCA
GTTACCAATGACGAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCA
CATTGCGGATCCCGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGA
TTGCATGTCTATGCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTC
GAGGATCGTCGAGCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCA
CAAACTATCTGAGTATTGATTGTCTCAGACTCGGCCCGGCGGTTCGTCTG
CGGTTTTTATCCTTGCATAAAGTGAAAATTTCATCTCAAATTCTCATCAA
TGTGATTGAGCAATGTACTGAGTCGATGCAGTATATTGAGTTAAGGCAGG
TGAAGATCGAGTCTAGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGT
TTACCCTATCTATATGACTTTGACATATCTGTTGGCGAGACTCCCATAAG
AAGCGAGAGGTTTCATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATAC
AAGACCTCGGATTGTCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAA
AAAAAGGTAAAATTGAAACGAGGCGTTCCTCGGCATTTCAGCTACTGAAT
ATGGTCCTTCTGTAGCACTTTGACGATCGCGTGTGGAGAATGGAGACACA
TACTGTCCTCAATGGCTGGTTTACTCTATTTAAATGACTTTGACACATCT
ACTTGGC back to topCoding sequence (CDS) from alignment at JC15F:158052..159758- >KJC3_000088-T3 ID=KJC3_000088-T3|Name=KJC3_000088-T3|organism=Aspergillus niger KJC3|type=CDS|length=4260bp|location=Sequence derived from alignment at JC15F:158052..159758- (Aspergillus niger KJC3)
CACTTTGACGATCGCGTGTGGAGAATGGAGACACATACTGTCCTCAATGG
CTGGTTTACTCTATTTAAATGATATATTGAGTTAAGGCAGGTGAAGATCG
AGTCTAGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGTTTACCCTAT
CTATATGACTTTGACATATCTGTTGGCGAGACTCCCATAAGAAGCGAGAG
GTTTCATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATACAAGACCTCG
GATTGTCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAAAAAAAGGTT
ATGTTTTATGTCGAGATCGACACTTCGCAATCGTCAAAAATATCGGCTGC
TCGGGCGTTTCGCATAATGAACAATAACAGCCGGATAACTCTGGCTAAAT
TACGCTTGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGTCTGTTC
CGACATATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCCCTTGCC
ATCCTTAGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCCAATATG
TGCGCCAAGTCGACATTGGATACGGCTCCTTCCCATATTCGATAGAGGAT
GTTACGTCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATGCTTGCG
TCAATTTTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCATTGGCCT
CCTTATCCCATTATAGGATGAAGGCATCCATCGACCCGATATACATGTCG
TTGTGCTACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCAGTTACC
AATGACGAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCACATTGC
GGATCCCGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGATTGCAT
GTCTATGCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTCGAGGAT
CGTCGAGCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCACAAACT
ATCTGAGTATTGATTGTCTCAGACTCGGCCCGGCGATGTATCTTCCAGCA
GAGATAATTGACCTTCACTTTGACGATCGCGTGTGGAGAATGGAGACACA
TACTGTCCTCAATGGCTGGTTTACTCTATTTAAATGATATATTGAGTTAA
GGCAGGTGAAGATCGAGTCTAGCGCGTGGAGAGAAATTCTGTCCGCAATG
GATAGTTTACCCTATCTATATGACTTTGACATATCTGTTGGCGAGACTCC
CATAAGAAGCGAGAGGTTTCATTCGCCTCCACCGCTGTTTTTTGCAGAGA
ATATACAAGACCTCGGATTGTCTGGGCTCGATCTTGTTGCGTTTATAAAT
CTCAAAAAAAAGGTTATGTTTTATGTCGAGATCGACACTTCGCAATCGTC
AAAAATATCGGCTGCTCGGGCGTTTCGCATAATGAACAATAACAGCCGGA
TAACTCTGGCTAAATTACGCTTGGTTAACAGAACCTTTTGTCATTGTGCG
TCAGCCCGTCTGTTCCGACATATTATAGCTGTAGCCGATTCGTCATACCA
CACCGCTCCCTTGCCATCCTTAGGAAGGTTGGTGAACCTTTCCAACAGCC
CATATGCCCAATATGTGCGCCAAGTCGACATTGGATACGGCTCCTTCCCA
TATTCGATAGAGGATGTTACGTCATATACGGTAGATCTTGCCGGTTTGCT
GTCTTCATGCTTGCGTCAATTTTCAAATCTCCAAGCTCTCGATTTCCGTG
GTCCGCCATTGGCCTCCTTATCCCATTATAGGATGAAGGCATCCATCGAC
CCGATATACATGTCGTTGTGCTACGTGCCTCTGCCAAACTTGACAGAACT
TGAACTTCAGTTACCAATGACGAATGATTTTGCTCCATTGTTTCCCGAGA
ATAGCAGCACATTGCGGATCCCGATTGAACAGATTCTCAACCGCCTGCAA
TATCTTGGATTGCATGTCTATGCGCAGACAAACCAGCAATCCCATGCTTA
TCATTTTTCGAGGATCGTCGAGCTTTCGACAAGCCTGACTTCTCTCTCAA
TCAGCAGCACAAACTATCTGAGTATTGATTGTCTCAGACTCGGCCCGGCG
ATGTATCTTCCAGCAGAGATAATTGACCTTCACTTTGACGATCGCGTGTG
GAGAATGGAGACACATACTGTCCTCAATGGCTGGTTTACTCTATTTAAAT
GATATATTGAGTTAAGGCAGGTGAAGATCGAGTCTAGCGCGTGGAGAGAA
ATTCTGTCCGCAATGGATAGTTTACCCTATCTATATGACTTTGACATATC
TGTTGGCGAGACTCCCATAAGAAGCGAGAGGTTTCATTCGCCTCCACCGC
TGTTTTTTGCAGAGAATATACAAGACCTCGGATTGTCTGGGCTCGATCTT
GTTGCGTTTATAAATCTCAAAAAAAAGGTTATGTTTTATGTCGAGATCGA
CACTTCGCAATCGTCAAAAATATCGGCTGCTCGGGCGTTTCGCATAATGA
ACAATAACAGCCGGATAACTCTGGCTAAATTACGCTTGGTTAACAGAACC
TTTTGTCATTGTGCGTCAGCCCGTCTGTTCCGACATATTATAGCTGTAGC
CGATTCGTCATACCACACCGCTCCCTTGCCATCCTTAGGAAGGTTGGTGA
ACCTTTCCAACAGCCCATATGCCCAATATGTGCGCCAAGTCGACATTGGA
TACGGCTCCTTCCCATATTCGATAGAGGATGTTACGTCATATACGGTAGA
TCTTGCCGGTTTGCTGTCTTCATGCTTGCGTCAATTTTCAAATCTCCAAG
CTCTCGATTTCCGTGGTCCGCCATTGGCCTCCTTATCCCATTATAGGATG
AAGGCATCCATCGACCCGATATACATGTCGTTGTGCTACGTGCCTCTGCC
AAACTTGACAGAACTTGAACTTCAGTTACCAATGACGAATGATTTTGCTC
CATTGTTTCCCGAGAATAGCAGCACATTGCGGATCCCGATTGAACAGATT
CTCAACCGCCTGCAATATCTTGGATTGCATGTCTATGCGCAGACAAACCA
GCAATCCCATGCTTATCATTTTTCGAGGATCGTCGAGCTTTCGACAAGCC
TGACTTCTCTCTCAATCAGCAGCACAAACTATCTGAGTATTGATTGTCTC
AGACTCGGCCCGGCGATGTATCTTCCAGCAGAGATAATTGACCTTCACTT
TGACGATCGCGTGTGGAGAATGGAGACACATACTGTCCTCAATGGCTGGT
TTACTCTATTTAAATGATATATTGAGTTAAGGCAGGTGAAGATCGAGTCT
AGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGTTTACCCTATCTATA
TGACTTTGACATATCTGTTGGCGAGACTCCCATAAGAAGCGAGAGGTTTC
ATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATACAAGACCTCGGATTG
TCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAAAAAAAGGTTATGTT
TTATGTCGAGATCGACACTTCGCAATCGTCAAAAATATCGGCTGCTCGGG
CGTTTCGCATAATGAACAATAACAGCCGGATAACTCTGGCTAAATTACGC
TTGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGTCTGTTCCGACA
TATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCCCTTGCCATCCT
TAGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCCAATATGTGCGC
CAAGTCGACATTGGATACGGCTCCTTCCCATATTCGATAGAGGATGTTAC
GTCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATGCTTGCGTCAAT
TTTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCATTGGCCTCCTTA
TCCCATTATAGGATGAAGGCATCCATCGACCCGATATACATGTCGTTGTG
CTACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCAGTTACCAATGA
CGAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCACATTGCGGATC
CCGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGATTGCATGTCTA
TGCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTCGAGGATCGTCG
AGCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCACAAACTATCTG
AGTATTGATTGTCTCAGACTCGGCCCGGCGATGTATCTTCCAGCAGAGAT
AATTGACCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000088-T3.utr3p1 | KJC3_000088-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000088-T3.utr5p1 | KJC3_000088-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:158052..159758 - |
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