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KJC3_000096-T3, KJC3_000096-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000096-T3
Unique NameKJC3_000096-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:196128..197596-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000096-T3 ID=KJC3_000096-T3|Name=KJC3_000096-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1469bp|location=Sequence derived from alignment at JC15F:196128..197596- (Aspergillus niger KJC3)
GTCCTTGATGGTCTATTTGGTCTAAAAGTCCATCAAGAGCCGGTCGTTCC
CTACAAGATTCTAAGCAGCATGAGTACCTTCGTCTCATGCTTACTCTGAT
GCTACTCAAATTTGCACTCTGATAATTGATCATATCAATAAAAATTACGT
CTAGAGTAAACATGACCTTTGTCGTAGGTACCCGCAATCCTGATGATTGC
ACCGGCGTGGTCTGCCAGAAGGTTAACACACATATTCAGCCTCTCTTCCT
TCCACTTACAGTCTGCTAATTCGAAAACGGACCAAGATGCACTGCAATCA
TAATAGATCGCACCGCCCGGAGACGATATCCTACGCGGAATACGCAGCTG
CCCATTGCTCAATGAACTTTATGAGAACATTTGCTGGCGCAGCCAGTGGT
ATTGCTTCCAGCATAGTGACGTGCCCGTTAGACGTGGTTAAGACAAGACT
GCAAGCTCAAGGCGGTTTTCGGAAGCCATCACACTCTCGTATGGCGTCCA
CAAACCGCAGTATACTGGATGTCAGCCGCGCTGTGTGGCTTGAGAAGGGT
CCAAGGGGAATGTATCAAGGACTAGGATTAACTGTACTGGGCTATATCCC
TAGATGGGCCATCTTCTTTAGCATTTACCATCGATGCTATGAAATGTTTC
ATGATTATTTTGGTTTGTCTACCCAGATAAATTTGTCGGGTGCTCTGATA
TGTTGATGGCTAAATAATGTGCGCAGACTTTAAAAGCCAATCAGTAACAT
CGCTCATGTCGTCTCTAACAGCAGGGACTTGTTCTATAGTCACTACAAAC
CCAATTCAGGTGGTCAGAGCCAGGCTCATATCACGGAGCGGCGTTTCCGG
TCAAGCATATTCGAGGCCGTTGTGGCAATACAGCTCAGCTTATGATGCGG
CTCGGCAAATCTATTGCAATGAAGGCATTCCAGCTTTCTACTCCGGTTTG
ACCCCAGCTCTTATGGGCGTGTCGCACCTCGCAATCCAATTTCCCCTCTA
CGAGGCCTTAAAGCGGAAGCTCACAGGCTCGGGATTAGGCGAATATGACC
GGAAGCCCTCCCATAACCTTTTAGGTGTTCTGAGCAAGATAATTTCTACT
GCTTCCACTTACCCTCACGAGGTCATTCGAACGCGACTTCAGACCCAACA
GAGACTCAAATCAAATATCATCGCATCGCGAAAGTTTGGAGGCATACAAG
AAATTGTTTATAATATTTGGAAGACGGAGGGATGGAAAGCTTTCTATGCT
GGCTTGGGCGCTAGCATGATACGTGCTGTACCGGCCTCGGTGACCACAAT
GCTAGTCTATGAGAACATGTTAAGTGTCCTGATCAGTACAAAAGCTGATG
GCGAAAGGAAATTAGCAGATCAAAGCTGTACACCGTAACATGCTTCAGCA
AATCGGAATGTTAAATTTCACAGTCTCTCGCCTTATACAGTGCATCAACC
TACATCAATCTGACATGGA
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Coding sequence (CDS) from alignment at JC15F:196128..197596-

>KJC3_000096-T3 ID=KJC3_000096-T3|Name=KJC3_000096-T3|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at JC15F:196128..197596- (Aspergillus niger KJC3)
ATCAAAGCTGTACACCGTAACATGCTTCAGCAAATCGGAATGTTAAACTT
TAAAAGCCAATCAGTAACATCGCTCATGTCGTCTCTAACAGCAGGGACTT
GTTCTATAGTCACTACAAACCCAATTCAGGTGGTCAGAGCCAGGCTCATA
TCACGGAGCGGCGTTTCCGGTCAAGCATATTCGAGGCCGTTGTGGCAATA
CAGCTCAGCTTATGATGCGGCTCGGCAAATCTATTGCAATGAAGGCATTC
CAGCTTTCTACTCCGGTTTGACCCCAGCTCTTATGGGCGTGTCGCACCTC
GCAATCCAATTTCCCCTCTACGAGGCCTTAAAGCGGAAGCTCACAGGCTC
GGGATTAGGCGAATATGACCGGAAGCCCTCCCATAACCTTTTAGGTGTTC
TGAGCAAGATAATTTCTACTGCTTCCACTTACCCTCACGAGGTCATTCGA
ACGCGACTTCAGACCCAACAGAGACTCAAATCAAATATCATCGCATCGCG
AAAGTTTGGAGGCATACAAGAAATTGTTTATAATATTTGGAAGACGGAGG
GATGGAAAGCTTTCTATGCTGGCTTGGGCGCTAGCATGATACGTGCTGTA
CCGGCCTCGGTGACCACAATATGCACTGCAATCATAATAGATCGCACCGC
CCGGAGACGATATCCTACGCGGAATACGCAGCTGCCCATTGCTCAATGAA
CTTTATGAGAACATTTGCTGGCGCAGCCAGTGGTATTGCTTCCAGCATAG
TGACGTGCCCGTTAGACGTGGTTAAGACAAGACTGCAAGCTCAAGGCGGT
TTTCGGAAGCCATCACACTCTCGTATGGCGTCCACAAACCGCAGTATACT
GGATGTCAGCCGCGCTGTGTGGCTTGAGAAGGGTCCAAGGGGAATGTATC
AAGGACTAGGATTAACTGTACTGGGCTATATCCCTAGATGGGCCATCTTC
TTTAGCATTTACCATCGATGCTATGAAATGTTTCATGATTATTTTGATCA
AAGCTGTACACCGTAACATGCTTCAGCAAATCGGAATGTTAAACTTTAAA
AGCCAATCAGTAACATCGCTCATGTCGTCTCTAACAGCAGGGACTTGTTC
TATAGTCACTACAAACCCAATTCAGGTGGTCAGAGCCAGGCTCATATCAC
GGAGCGGCGTTTCCGGTCAAGCATATTCGAGGCCGTTGTGGCAATACAGC
TCAGCTTATGATGCGGCTCGGCAAATCTATTGCAATGAAGGCATTCCAGC
TTTCTACTCCGGTTTGACCCCAGCTCTTATGGGCGTGTCGCACCTCGCAA
TCCAATTTCCCCTCTACGAGGCCTTAAAGCGGAAGCTCACAGGCTCGGGA
TTAGGCGAATATGACCGGAAGCCCTCCCATAACCTTTTAGGTGTTCTGAG
CAAGATAATTTCTACTGCTTCCACTTACCCTCACGAGGTCATTCGAACGC
GACTTCAGACCCAACAGAGACTCAAATCAAATATCATCGCATCGCGAAAG
TTTGGAGGCATACAAGAAATTGTTTATAATATTTGGAAGACGGAGGGATG
GAAAGCTTTCTATGCTGGCTTGGGCGCTAGCATGATACGTGCTGTACCGG
CCTCGGTGACCACAATATGCACTGCAATCATAATAGATCGCACCGCCCGG
AGACGATATCCTACGCGGAATACGCAGCTGCCCATTGCTCAATGAACTTT
ATGAGAACATTTGCTGGCGCAGCCAGTGGTATTGCTTCCAGCATAGTGAC
GTGCCCGTTAGACGTGGTTAAGACAAGACTGCAAGCTCAAGGCGGTTTTC
GGAAGCCATCACACTCTCGTATGGCGTCCACAAACCGCAGTATACTGGAT
GTCAGCCGCGCTGTGTGGCTTGAGAAGGGTCCAAGGGGAATGTATCAAGG
ACTAGGATTAACTGTACTGGGCTATATCCCTAGATGGGCCATCTTCTTTA
GCATTTACCATCGATGCTATGAAATGTTTCATGATTATTTTGATCAAAGC
TGTACACCGTAACATGCTTCAGCAAATCGGAATGTTAAACTTTAAAAGCC
AATCAGTAACATCGCTCATGTCGTCTCTAACAGCAGGGACTTGTTCTATA
GTCACTACAAACCCAATTCAGGTGGTCAGAGCCAGGCTCATATCACGGAG
CGGCGTTTCCGGTCAAGCATATTCGAGGCCGTTGTGGCAATACAGCTCAG
CTTATGATGCGGCTCGGCAAATCTATTGCAATGAAGGCATTCCAGCTTTC
TACTCCGGTTTGACCCCAGCTCTTATGGGCGTGTCGCACCTCGCAATCCA
ATTTCCCCTCTACGAGGCCTTAAAGCGGAAGCTCACAGGCTCGGGATTAG
GCGAATATGACCGGAAGCCCTCCCATAACCTTTTAGGTGTTCTGAGCAAG
ATAATTTCTACTGCTTCCACTTACCCTCACGAGGTCATTCGAACGCGACT
TCAGACCCAACAGAGACTCAAATCAAATATCATCGCATCGCGAAAGTTTG
GAGGCATACAAGAAATTGTTTATAATATTTGGAAGACGGAGGGATGGAAA
GCTTTCTATGCTGGCTTGGGCGCTAGCATGATACGTGCTGTACCGGCCTC
GGTGACCACAATATGCACTGCAATCATAATAGATCGCACCGCCCGGAGAC
GATATCCTACGCGGAATACGCAGCTGCCCATTGCTCAATGAACTTTATGA
GAACATTTGCTGGCGCAGCCAGTGGTATTGCTTCCAGCATAGTGACGTGC
CCGTTAGACGTGGTTAAGACAAGACTGCAAGCTCAAGGCGGTTTTCGGAA
GCCATCACACTCTCGTATGGCGTCCACAAACCGCAGTATACTGGATGTCA
GCCGCGCTGTGTGGCTTGAGAAGGGTCCAAGGGGAATGTATCAAGGACTA
GGATTAACTGTACTGGGCTATATCCCTAGATGGGCCATCTTCTTTAGCAT
TTACCATCGATGCTATGAAATGTTTCATGATTATTTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005347ATP transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000096KJC3_000096Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000096-T3KJC3_000096-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000096-T3.cdsKJC3_000096-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000096-T3.utr3p1KJC3_000096-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000096-T3.exon4KJC3_000096-T3.exon4Aspergillus niger KJC3exon
KJC3_000096-T3.exon3KJC3_000096-T3.exon3Aspergillus niger KJC3exon
KJC3_000096-T3.exon2KJC3_000096-T3.exon2Aspergillus niger KJC3exon
KJC3_000096-T3.exon1KJC3_000096-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000096-T3.utr5p2KJC3_000096-T3.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000096-T3.utr5p1KJC3_000096-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:196128..197596 -
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