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KJC3_000099-T1, KJC3_000099-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000099-T1
Unique NameKJC3_000099-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:207538..209259-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000099-T1 ID=KJC3_000099-T1|Name=KJC3_000099-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1722bp|location=Sequence derived from alignment at JC15F:207538..209259- (Aspergillus niger KJC3)
GGCCGACTATCTACGCGGTATGTATATAAATTGCAAACCTTCGAAATGGA
GTTACTCCTTTTACTACCTCTACTACCTTGGAAAGATCTCTTGGCGGTTC
AGTGGATCTCAATTGGAGTGCACCATAATGCCCGACCTCTATCATCCTGG
AACATTGCGCAACGACTCAGAACAAACCGACAGCCTCGATGTCGGCACCG
AAACCTACTTCGCCTCACATCTCGAGCCAGCAATTTCCAAATTGGCCAGC
ATACATGCACCTCCGGAATTCGAAGTTTACTGGGACTCTGAGGACCCCGA
AAATCCCCGCCTGTGGCCGCTTTGGTACAAAGGCCTCACAGTCGCTGCTA
TGAGTCTTGGTGCTACAGTTGTCAGCCTCTCCAGCACACTGTACACATCT
GGGATTCCAGGTCTACAGAAAGATTTTCGCGTTTCGAAGATCGTGGCTCT
CCTTGGTGTCACCACCTACCTTCTTGGGATGGGGATAGGCAGCATCATTT
TTGCTCCACTTAGCGAGCTTGTGGGACGGCGGCCAGTCTATATTGTCGCA
ATAATAATATTTTTGCTTTTGTTGTTGCCGAGTGCTTTAGCTCAAAACAT
TGCTTCAATCCTCGTGAGCAGATTCTTTGGAGGATTCTTTGGAAGTGCAT
TGATGGCGAACTCGCCCGCATCTGTGAATGATATCGTCTCGGATAAGCAC
CGTGCTTTAGCATTCGGCTTCTGGTCTATTGGCCCCACCAACGGCCCTGT
ATATGGCCCAATCATAGGAGGGTTTGTATTCCAATATCTCGGCTGGAGGT
GGACAAATTGGATTGTCCTCATCATTGGGGGTGTGGTCCTGGTCCTGATA
GCCTCTGTTAAGGAAACATACGCCCCCGTGATCTTGAAAAAGCGCGCCGC
GTTAAAAAGGAAGGAGACACAGGACCCCAAATGGTGGACACGATATGACG
ATGGTGTCAGATTTACAACTTCACTGAGAATCAATCTCAAGAGACCTTTC
GTGATGCTCCTAACTGAGCCGATATGGTAAACTATCTCCCTCCCATGCTA
CAAAGCCAAGGTTAACATTCCCGCAGTATATTTTGGGATGGCTACGTTGC
GATTGTTTATGGCATCCTTTACCTATGTTTCGTTGCGTATCCAATCGCTT
TCCAACAAGAACGTGGGTGGTCGCCAGGCATCGGTGGTCTTTCGTTCGTC
GGTATAGGCGTCGGTGTCTTAATCGCCATTGCATGCGAACCTTTGTTTCG
TAAAGTGATCAATCTTCATCTCAAGGATCCAGAAACCGGCATGGTGGAAC
CGGAGGCTATGGTCAGCGTCGTCTTTTTTGGTGCCACTCTTTTAGCCATT
GGCCAGTTGTGGTTTTCCTGGACTTGTACTCCAAACGTTCACTGGATCGT
CCCTATTCTAGCCGGTGTTCCCTTTGGAATTGGTAATGCATGCGTCTTCA
TTTACGCCTCAAACTACATTGCCCGGTCTTATGGCATTTACGCCGCATCT
GCGCTTGCAGGAAATATGCTCACTCGCAGTGTCATGGGAGCATTCCTCCC
GCTTGCGGGGCCATCAATGTATAAGACTCTGGGCTTGAATTGGGCAAGTA
CAATCCTAGGAATTGTTGAGGCAGTATGCATCTTGATACCTGTTGTCTTC
TACTTTTATGGACACAGAATTCGAAAGGCGAGTCGCTTTATCAAAGAGGT
AGAAAAGCTGCAGATAGCTTGA
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Coding sequence (CDS) from alignment at JC15F:207538..209259-

>KJC3_000099-T1 ID=KJC3_000099-T1|Name=KJC3_000099-T1|organism=Aspergillus niger KJC3|type=CDS|length=3306bp|location=Sequence derived from alignment at JC15F:207538..209259- (Aspergillus niger KJC3)
TATATTTTGGGATGGCTACGTTGCGATTGTTTATGGCATCCTTTACCTAT
GTTTCGTTGCGTATCCAATCGCTTTCCAACAAGAACGTGGGTGGTCGCCA
GGCATCGGTGGTCTTTCGTTCGTCGGTATAGGCGTCGGTGTCTTAATCGC
CATTGCATGCGAACCTTTGTTTCGTAAAGTGATCAATCTTCATCTCAAGG
ATCCAGAAACCGGCATGGTGGAACCGGAGGCTATGGTCAGCGTCGTCTTT
TTTGGTGCCACTCTTTTAGCCATTGGCCAGTTGTGGTTTTCCTGGACTTG
TACTCCAAACGTTCACTGGATCGTCCCTATTCTAGCCGGTGTTCCCTTTG
GAATTGGTAATGCATGCGTCTTCATTTACGCCTCAAACTACATTGCCCGG
TCTTATGGCATTTACGCCGCATCTGCGCTTGCAGGAAATATGCTCACTCG
CAGTGTCATGGGAGCATTCCTCCCGCTTGCGGGGCCATCAATGTATAAGA
CTCTGGGCTTGAATTGGGCAAGTACAATCCTAGGAATTGTTGAGGCAGTA
TGCATCTTGATACCTGTTGTCTTCTACTTTTATGGACACAGAATTCGAAA
GGCGAGTCGCTTTATCAAAGAGGTAGAAAAGCTGCAGATAGCTTGAATGT
ATATAAATTGCAAACCTTCGAAATGGAGTTACTCCTTTTACTACCTCTAC
TACCTTGGAAAGATCTCTTGGCGGTTCAGTGGATCTCAATTGGAGTGCAC
CATAATGCCCGACCTCTATCATCCTGGAACATTGCGCAACGACTCAGAAC
AAACCGACAGCCTCGATGTCGGCACCGAAACCTACTTCGCCTCACATCTC
GAGCCAGCAATTTCCAAATTGGCCAGCATACATGCACCTCCGGAATTCGA
AGTTTACTGGGACTCTGAGGACCCCGAAAATCCCCGCCTGTGGCCGCTTT
GGTACAAAGGCCTCACAGTCGCTGCTATGAGTCTTGGTGCTACAGTTGTC
AGCCTCTCCAGCACACTGTACACATCTGGGATTCCAGGTCTACAGAAAGA
TTTTCGCGTTTCGAAGATCGTGGCTCTCCTTGGTGTCACCACCTACCTTC
TTGGGATGGGGATAGGCAGCATCATTTTTGCTCCACTTAGCGAGCTTGTG
GGACGGCGGCCAGTCTATATTGTCGCAATAATAATATTTTTGCTTTTGTT
GTTGCCGAGTGCTTTAGCTCAAAACATTGCTTCAATCCTCGTGAGCAGAT
TCTTTGGAGGATTCTTTGGAAGTGCATTGATGGCGAACTCGCCCGCATCT
GTGAATGATATCGTCTCGGATAAGCACCGTGCTTTAGCATTCGGCTTCTG
GTCTATTGGCCCCACCAACGGCCCTGTATATGGCCCAATCATAGGAGGGT
TTGTATTCCAATATCTCGGCTGGAGGTGGACAAATTGGATTGTCCTCATC
ATTGGGGGTGTGGTCCTGGTCCTGATAGCCTCTGTTAAGGAAACATACGC
CCCCGTGATCTTGAAAAAGCGCGCCGCGTTAAAAAGGAAGGAGACACAGG
ACCCCAAATGGTGGACACGATATGACGATGGTGTCAGATTTACAACTTCA
CTGAGAATCAATCTCAAGAGACCTTTCGTGATGCTCCTAACTGAGCCGAT
ATGTATATTTTGGGATGGCTACGTTGCGATTGTTTATGGCATCCTTTACC
TATGTTTCGTTGCGTATCCAATCGCTTTCCAACAAGAACGTGGGTGGTCG
CCAGGCATCGGTGGTCTTTCGTTCGTCGGTATAGGCGTCGGTGTCTTAAT
CGCCATTGCATGCGAACCTTTGTTTCGTAAAGTGATCAATCTTCATCTCA
AGGATCCAGAAACCGGCATGGTGGAACCGGAGGCTATGGTCAGCGTCGTC
TTTTTTGGTGCCACTCTTTTAGCCATTGGCCAGTTGTGGTTTTCCTGGAC
TTGTACTCCAAACGTTCACTGGATCGTCCCTATTCTAGCCGGTGTTCCCT
TTGGAATTGGTAATGCATGCGTCTTCATTTACGCCTCAAACTACATTGCC
CGGTCTTATGGCATTTACGCCGCATCTGCGCTTGCAGGAAATATGCTCAC
TCGCAGTGTCATGGGAGCATTCCTCCCGCTTGCGGGGCCATCAATGTATA
AGACTCTGGGCTTGAATTGGGCAAGTACAATCCTAGGAATTGTTGAGGCA
GTATGCATCTTGATACCTGTTGTCTTCTACTTTTATGGACACAGAATTCG
AAAGGCGAGTCGCTTTATCAAAGAGGTAGAAAAGCTGCAGATAGCTTGAA
TGTATATAAATTGCAAACCTTCGAAATGGAGTTACTCCTTTTACTACCTC
TACTACCTTGGAAAGATCTCTTGGCGGTTCAGTGGATCTCAATTGGAGTG
CACCATAATGCCCGACCTCTATCATCCTGGAACATTGCGCAACGACTCAG
AACAAACCGACAGCCTCGATGTCGGCACCGAAACCTACTTCGCCTCACAT
CTCGAGCCAGCAATTTCCAAATTGGCCAGCATACATGCACCTCCGGAATT
CGAAGTTTACTGGGACTCTGAGGACCCCGAAAATCCCCGCCTGTGGCCGC
TTTGGTACAAAGGCCTCACAGTCGCTGCTATGAGTCTTGGTGCTACAGTT
GTCAGCCTCTCCAGCACACTGTACACATCTGGGATTCCAGGTCTACAGAA
AGATTTTCGCGTTTCGAAGATCGTGGCTCTCCTTGGTGTCACCACCTACC
TTCTTGGGATGGGGATAGGCAGCATCATTTTTGCTCCACTTAGCGAGCTT
GTGGGACGGCGGCCAGTCTATATTGTCGCAATAATAATATTTTTGCTTTT
GTTGTTGCCGAGTGCTTTAGCTCAAAACATTGCTTCAATCCTCGTGAGCA
GATTCTTTGGAGGATTCTTTGGAAGTGCATTGATGGCGAACTCGCCCGCA
TCTGTGAATGATATCGTCTCGGATAAGCACCGTGCTTTAGCATTCGGCTT
CTGGTCTATTGGCCCCACCAACGGCCCTGTATATGGCCCAATCATAGGAG
GGTTTGTATTCCAATATCTCGGCTGGAGGTGGACAAATTGGATTGTCCTC
ATCATTGGGGGTGTGGTCCTGGTCCTGATAGCCTCTGTTAAGGAAACATA
CGCCCCCGTGATCTTGAAAAAGCGCGCCGCGTTAAAAAGGAAGGAGACAC
AGGACCCCAAATGGTGGACACGATATGACGATGGTGTCAGATTTACAACT
TCACTGAGAATCAATCTCAAGAGACCTTTCGTGATGCTCCTAACTGAGCC
GATATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000099KJC3_000099Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000099-T1KJC3_000099-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000099-T1.cdsKJC3_000099-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000099-T1.exon2KJC3_000099-T1.exon2Aspergillus niger KJC3exon
KJC3_000099-T1.exon1KJC3_000099-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000099-T1.utr5p1KJC3_000099-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:207538..209259 -
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