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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:217529..221086- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000101-T1 ID=KJC3_000101-T1|Name=KJC3_000101-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3558bp|location=Sequence derived from alignment at JC15F:217529..221086- (Aspergillus niger KJC3)
CTTGAATCTCTAAAGGATTATTACACTTCTTGCCTGTTAGTCGTCGGGAC
GGCCAATTAAGCCGAAATAGCCAAATAGTTTTGAATATCTGACACAGAGT
TGGAGTAGGTGACGTGACAACATACAATTCTGAGAGCCTTGAGCTATTTC
AGGATAGTCAATTGGAAGAGCCCGCACAATGCAATATGCTCGAGCCCTCC
GTCGCGCACCTCGCGGCACGATGTTATCAAAATCATTACCCGCAGGTCCA
GACCACGAGCGAAAGCACCCTGTATTCTAGTATGCTCGCCTTCAGGCCGA
AAAAGGAATGGTAAGAGGAAGAGGAGAGCGAGGAGAAGGGAAAACTATAA
TGTATCCCAGCGTCCGGTAGACATAAAAGGGCGCACGTCTCCCCATGGAT
TTATCTTTGGAGATTAAAGCTCCTATTCCACATAGTACCAATCTGTTCTG
AAATACCATATTACCAACCACCGTTGAATTATTCAGTATGGTCGCTCCTC
ACCAGGACGTTGACACCTCCCCATCAGTCCCCCAAGCCATTAACCAGCGA
CTTGAAAAACAATCTTTGCACACAATCGTTGTCGGAGAGCTGGAGCCAGT
CGTGGCTAAATTGGTGAAACAAGCCTTGTCCAACCCAGCCATATGGCCTG
ATGAGCTGCCGGCTACTCCTGTCTGTTCGTCCGGACCCTCCACGCCGCCG
TTTGATGCGGATGAACTGCAGAAGCAGCTGGTCAAAATCACCCGCGATGG
ATGGCCTTCGGTTGAACTTTCCATGGCAATGAAGCCTGATCAATCCAGTT
CTGCAAGCAATGAACAGGACGGCATTCAGGTTGGAAATGATCTCGGATAT
CCGATCCATACTACACCGGATGACTTCAAATTGTTTAGAGAGTGGGCATC
TATATGCTCATTCAAAACAGTTGTGGAAACGTATGAGCCACTAGCCATCC
TCCCCTTCTACTTTCCTTTCTCAGATGATGGCTGACGACTGACCTAGGTG
GGACAAAGAAACATGCAAATATAAGATCGCCGAACCGGTGGAGACCAGCA
GTAGCCTGGACGACTATGCTGAATATGCATTCGTTGTCCGCGAACGTGTT
GGTTCGTGATAATCTGCATGCTGTGACGGACACAATATTAACCGTAAATC
AGAACGCAACACCGAGAAGGTGATACCGTACATAGATATCAAGTCGGGAG
GCCTACGCGACATCCTGCGCGTCGTGCTGCACGGCATCAAAGCTATTAGC
TTGATGGAGGATAAGCCATCGGTGACTGAGACTGAGCATTACAGTACCTC
CGAGAACAGCACTGACGTCGGTTTAGATCGAACAAAATGTTCTGTTTCAT
TTCCTCCCAGAGCTCGACAAGTATGCGGAGGATATGAACAACCCAGACTG
TGCATTACCACGTCAGCACCTCCGCTTGCTCATTGACCACCTCAAGCGGG
CCTATTCGGATATCGCGCAGCGTCTCGAGTCAATGTTGCAGCACGGTCAC
ATAACTTATGACCTGCTCTGGGCGCTTTTCAAGCCGGATTCCCATGTTTT
CACAACATGCTTTGGCACTAAAGAGCCCCGATGTGTCGTATTCGATGCGG
GGGAAGAGGTGACACAGAATGACGAGACATGGTTCAATCTCGAATGCCGA
TTCCTTGATTATGATGGAAACAAGTTCGGCGAGGCCGGTATCTTTCTCCG
CCTAGCAAAGTTCCGAGGGTCAAAGCCGATCGAGAGCCTGGAGGCCTTCC
CTCTCCGCCACCATCCAAATCACGAGCAAGTCCGGAAAGACTTGGTCGAA
AGAGGCCGAAAGTTTCGGGATTTGGCTGGCTCCCACATCCAGCACTGCAA
AGGCAGCGCATTCTTCATGAACAACAAGGGGAAGATTATCAAACTCAACA
TCAACAGTCGAGTGGCAGTGGACGCAGCATTTTTCCATGAGATGCAGCCA
AACTACTCCCGGCCGTCACTCCGCGACGGAGGGGTAAAAGACAAGAATGG
GATAACGGTCGTCGACATACGTGCAATGCTCAAGGAGGGCCGCGAGCGAG
AGAAGGAGAGAATGCGAGGAGATGGGGTGGATGCACAACAGCTGAGCGAG
ACCGATCTCTTGGCCGCCTGCCCAACAGTATGCTGTTTCAGCTTCAGGGA
GAAGATGTTCTGTATGTGACACGACTGGCAATTGCTTGGCGTCCGACTGA
TGTGATCCCAGTGGAGTGCGCAGTCGGTGCGCTTGGGGAAGTTAGTTGGT
CACCCGAATCCTTCGACTGCCTGCAGATCCCTTCCGATGACAGGACCTTG
CTCTTGTCACTGGCGAAAACCCGCCTGGGTCTGATACCGACGGTACCGTT
CGACGACGTAATTGATGGAAAAGGCCAAGGACTCAATATCCTTCTGAAGT
ACGTCGGTGAAATATCTGTGCCCAATCAAGTTCCCCGGCCTAACTCGTGC
TAGTGGTCCACCGGGCGTTGGCAAGACATTCACAGTTGAGGCAACCTCGG
AATATTTCAACCTTCCTCTCTATTCGGTAAAGAAACCCCCCCCCCCCCCC
CAATAGCGCTGGCTGTAGCCGTGCTGACATTTCCAGATATCTGCAGGCGA
ACTTGTTGTCGACCACGGCGATTCGAATGTACTTGAGCAACAACTTGAAG
CGGTATTCAAGATCGCCAAACATTTTAATGCCATACTTCTTTTGGATGAG
GCAGATGCGTTCATGGAACAGCGCACATCTTACCACGATGCTCACAATCG
CCTTGTGACCGTTTTCCTCCGAAAGCTCGAATATTATCAAGGAATCCTTT
TCTTGACTTCGAATCGGGGTATTCAGTTTGATGATGCAATTCTCAGCCGG
ATCCATCTGACCATCGAGTATGAAGGTTTAACGAGGGAGTTTCGCAGAGA
TCTCTGGTCAACCTTTCTGTCCAAGGCGCGTACGATGCAAGGACCTGCCG
TTGTGGAGGAGCAAGAGCTTCGACGATTGGAATCTTTGGCTCTGAACGGA
CGCGAGGTGGGTTCCAGAGCGCTGCTATGCACGTCTCCGTTGTTGACTAA
CATGAGCCAGATCAAAAACATCGCAGCAATCGCACATGCACTTGCCGAGG
CAGATGCTAACCAAGTGAGCTATAAATACTTGGAGCTGGCCGCGAAATCG
AATAAAAGATTTTCGAAGGAGTTCGGTGGACGGGGGATGGTTGACGGGAT
GTATGTTTAGCAGCATACCCGGGAAAGTCGTGCTAATAATTCCGTCGCTC
AGGCCTCCCGTGCAGTCGGGCGCTTGTTGCAACATGTAGGTTTTCTGTCG
CAACATATCTATTTAGTAGTCGGTTTTTAATATAGGCTCCAGTGCCCTTC
GAGACTCAAGCATCCGTAGACATCGGCGCTTTTATAAGCTCCAGTGCTCG
AATGCTCCAGATCATCTCCCCACACCGGTCAACGAGCTAAAGACGCAGAA
ATGCAATTTGACATAGGCATATTTTTTATTTCTGATTCCGCATTAGCCAC
TAGAGCGTGTAAGGGATCCGAGGTATAAACAGGCAGGAGTATAATGGTTT
CTGAGAGC back to topCoding sequence (CDS) from alignment at JC15F:217529..221086- >KJC3_000101-T1 ID=KJC3_000101-T1|Name=KJC3_000101-T1|organism=Aspergillus niger KJC3|type=CDS|length=6036bp|location=Sequence derived from alignment at JC15F:217529..221086- (Aspergillus niger KJC3)
ATCGAACAAAATGTTCTGTTTCATTTCCTCCCAGAGCTCGACAAGTATGC
GGAGGATATGAACAACCCAGACTGTGCATTACCACGTCAGCACCTCCGCT
TGCTCATTGACCACCTCAAGCGGGCCTATTCGGATATCGCGCAGCGTCTC
GAGTCAATGTTGCAGCACGGTCACATAACTTATGACCTGCTCTGGGCGCT
TTTCAAGCCGGATTCCCATGTTTTCACAACATGCTTTGGCACTAAAGAGC
CCCGATGTGTCGTATTCGATGCGGGGGAAGAGGTGACACAGAATGACGAG
ACATGGTTCAATCTCGAATGCCGATTCCTTGATTATGATGGAAACAAGTT
CGGCGAGGCCGGTATCTTTCTCCGCCTAGCAAAGTTCCGAGGGTCAAAGC
CGATCGAGAGCCTGGAGGCCTTCCCTCTCCGCCACCATCCAAATCACGAG
CAAGTCCGGAAAGACTTGGTCGAAAGAGGCCGAAAGTTTCGGGATTTGGC
TGGCTCCCACATCCAGCACTGCAAAGGCAGCGCATTCTTCATGAACAACA
AGGGGAAGATTATCAAACTCAACATCAACAGTCGAGTGGCAGTGGACGCA
GCATTTTTCCATGAGATGCAGCCAAACTACTCCCGGCCGTCACTCCGCGA
CGGAGGGGTAAAAGACAAGAATGGGATAACGGTCGTCGACATACGTGCAA
TGCTCAAGGAGGGCCGCGAGCGAGAGAAGGAGAGAATGCGAGGAGATGGG
GTGGATGCACAACAGCTGAGCGAGACCGATCTCTTGGCCGCCTGCCCAAC
AGTATGCTGTTTCAGCTTCAGGGAGAAGATGTTCTGTATGTGAAACGCAA
CACCGAGAAGGTGATACCGTACATAGATATCAAGTCGGGAGGCCTACGCG
ACATCCTGCGCGTCGTGCTGCACGGCATCAAAGCTATTAGCTTGATGGAG
GATAAGCCATCGGTGGGACAAAGAAACATGCAAATATAAGATCGCCGAAC
CGGTGGAGACCAGCAGTAGCCTGGACGACTATGCTGAATATGCATTCGTT
GTCCGCGAACGTGTTGATGGTCGCTCCTCACCAGGACGTTGACACCTCCC
CATCAGTCCCCCAAGCCATTAACCAGCGACTTGAAAAACAATCTTTGCAC
ACAATCGTTGTCGGAGAGCTGGAGCCAGTCGTGGCTAAATTGGTGAAACA
AGCCTTGTCCAACCCAGCCATATGGCCTGATGAGCTGCCGGCTACTCCTG
TCTGTTCGTCCGGACCCTCCACGCCGCCGTTTGATGCGGATGAACTGCAG
AAGCAGCTGGTCAAAATCACCCGCGATGGATGGCCTTCGGTTGAACTTTC
CATGGCAATGAAGCCTGATCAATCCAGTTCTGCAAGCAATGAACAGGACG
GCATTCAGGTTGGAAATGATCTCGGATATCCGATCCATACTACACCGGAT
GACTTCAAATTGTTTAGAGAGTGGGCATCTATATGCTCATTCAAAACAGT
TGTGGAAACATCGAACAAAATGTTCTGTTTCATTTCCTCCCAGAGCTCGA
CAAGTATGCGGAGGATATGAACAACCCAGACTGTGCATTACCACGTCAGC
ACCTCCGCTTGCTCATTGACCACCTCAAGCGGGCCTATTCGGATATCGCG
CAGCGTCTCGAGTCAATGTTGCAGCACGGTCACATAACTTATGACCTGCT
CTGGGCGCTTTTCAAGCCGGATTCCCATGTTTTCACAACATGCTTTGGCA
CTAAAGAGCCCCGATGTGTCGTATTCGATGCGGGGGAAGAGGTGACACAG
AATGACGAGACATGGTTCAATCTCGAATGCCGATTCCTTGATTATGATGG
AAACAAGTTCGGCGAGGCCGGTATCTTTCTCCGCCTAGCAAAGTTCCGAG
GGTCAAAGCCGATCGAGAGCCTGGAGGCCTTCCCTCTCCGCCACCATCCA
AATCACGAGCAAGTCCGGAAAGACTTGGTCGAAAGAGGCCGAAAGTTTCG
GGATTTGGCTGGCTCCCACATCCAGCACTGCAAAGGCAGCGCATTCTTCA
TGAACAACAAGGGGAAGATTATCAAACTCAACATCAACAGTCGAGTGGCA
GTGGACGCAGCATTTTTCCATGAGATGCAGCCAAACTACTCCCGGCCGTC
ACTCCGCGACGGAGGGGTAAAAGACAAGAATGGGATAACGGTCGTCGACA
TACGTGCAATGCTCAAGGAGGGCCGCGAGCGAGAGAAGGAGAGAATGCGA
GGAGATGGGGTGGATGCACAACAGCTGAGCGAGACCGATCTCTTGGCCGC
CTGCCCAACAGTATGCTGTTTCAGCTTCAGGGAGAAGATGTTCTGTATGT
GAAACGCAACACCGAGAAGGTGATACCGTACATAGATATCAAGTCGGGAG
GCCTACGCGACATCCTGCGCGTCGTGCTGCACGGCATCAAAGCTATTAGC
TTGATGGAGGATAAGCCATCGGTGGGACAAAGAAACATGCAAATATAAGA
TCGCCGAACCGGTGGAGACCAGCAGTAGCCTGGACGACTATGCTGAATAT
GCATTCGTTGTCCGCGAACGTGTTGATGGTCGCTCCTCACCAGGACGTTG
ACACCTCCCCATCAGTCCCCCAAGCCATTAACCAGCGACTTGAAAAACAA
TCTTTGCACACAATCGTTGTCGGAGAGCTGGAGCCAGTCGTGGCTAAATT
GGTGAAACAAGCCTTGTCCAACCCAGCCATATGGCCTGATGAGCTGCCGG
CTACTCCTGTCTGTTCGTCCGGACCCTCCACGCCGCCGTTTGATGCGGAT
GAACTGCAGAAGCAGCTGGTCAAAATCACCCGCGATGGATGGCCTTCGGT
TGAACTTTCCATGGCAATGAAGCCTGATCAATCCAGTTCTGCAAGCAATG
AACAGGACGGCATTCAGGTTGGAAATGATCTCGGATATCCGATCCATACT
ACACCGGATGACTTCAAATTGTTTAGAGAGTGGGCATCTATATGCTCATT
CAAAACAGTTGTGGAAACATCGAACAAAATGTTCTGTTTCATTTCCTCCC
AGAGCTCGACAAGTATGCGGAGGATATGAACAACCCAGACTGTGCATTAC
CACGTCAGCACCTCCGCTTGCTCATTGACCACCTCAAGCGGGCCTATTCG
GATATCGCGCAGCGTCTCGAGTCAATGTTGCAGCACGGTCACATAACTTA
TGACCTGCTCTGGGCGCTTTTCAAGCCGGATTCCCATGTTTTCACAACAT
GCTTTGGCACTAAAGAGCCCCGATGTGTCGTATTCGATGCGGGGGAAGAG
GTGACACAGAATGACGAGACATGGTTCAATCTCGAATGCCGATTCCTTGA
TTATGATGGAAACAAGTTCGGCGAGGCCGGTATCTTTCTCCGCCTAGCAA
AGTTCCGAGGGTCAAAGCCGATCGAGAGCCTGGAGGCCTTCCCTCTCCGC
CACCATCCAAATCACGAGCAAGTCCGGAAAGACTTGGTCGAAAGAGGCCG
AAAGTTTCGGGATTTGGCTGGCTCCCACATCCAGCACTGCAAAGGCAGCG
CATTCTTCATGAACAACAAGGGGAAGATTATCAAACTCAACATCAACAGT
CGAGTGGCAGTGGACGCAGCATTTTTCCATGAGATGCAGCCAAACTACTC
CCGGCCGTCACTCCGCGACGGAGGGGTAAAAGACAAGAATGGGATAACGG
TCGTCGACATACGTGCAATGCTCAAGGAGGGCCGCGAGCGAGAGAAGGAG
AGAATGCGAGGAGATGGGGTGGATGCACAACAGCTGAGCGAGACCGATCT
CTTGGCCGCCTGCCCAACAGTATGCTGTTTCAGCTTCAGGGAGAAGATGT
TCTGTATGTGAAACGCAACACCGAGAAGGTGATACCGTACATAGATATCA
AGTCGGGAGGCCTACGCGACATCCTGCGCGTCGTGCTGCACGGCATCAAA
GCTATTAGCTTGATGGAGGATAAGCCATCGGTGGGACAAAGAAACATGCA
AATATAAGATCGCCGAACCGGTGGAGACCAGCAGTAGCCTGGACGACTAT
GCTGAATATGCATTCGTTGTCCGCGAACGTGTTGATGGTCGCTCCTCACC
AGGACGTTGACACCTCCCCATCAGTCCCCCAAGCCATTAACCAGCGACTT
GAAAAACAATCTTTGCACACAATCGTTGTCGGAGAGCTGGAGCCAGTCGT
GGCTAAATTGGTGAAACAAGCCTTGTCCAACCCAGCCATATGGCCTGATG
AGCTGCCGGCTACTCCTGTCTGTTCGTCCGGACCCTCCACGCCGCCGTTT
GATGCGGATGAACTGCAGAAGCAGCTGGTCAAAATCACCCGCGATGGATG
GCCTTCGGTTGAACTTTCCATGGCAATGAAGCCTGATCAATCCAGTTCTG
CAAGCAATGAACAGGACGGCATTCAGGTTGGAAATGATCTCGGATATCCG
ATCCATACTACACCGGATGACTTCAAATTGTTTAGAGAGTGGGCATCTAT
ATGCTCATTCAAAACAGTTGTGGAAACATCGAACAAAATGTTCTGTTTCA
TTTCCTCCCAGAGCTCGACAAGTATGCGGAGGATATGAACAACCCAGACT
GTGCATTACCACGTCAGCACCTCCGCTTGCTCATTGACCACCTCAAGCGG
GCCTATTCGGATATCGCGCAGCGTCTCGAGTCAATGTTGCAGCACGGTCA
CATAACTTATGACCTGCTCTGGGCGCTTTTCAAGCCGGATTCCCATGTTT
TCACAACATGCTTTGGCACTAAAGAGCCCCGATGTGTCGTATTCGATGCG
GGGGAAGAGGTGACACAGAATGACGAGACATGGTTCAATCTCGAATGCCG
ATTCCTTGATTATGATGGAAACAAGTTCGGCGAGGCCGGTATCTTTCTCC
GCCTAGCAAAGTTCCGAGGGTCAAAGCCGATCGAGAGCCTGGAGGCCTTC
CCTCTCCGCCACCATCCAAATCACGAGCAAGTCCGGAAAGACTTGGTCGA
AAGAGGCCGAAAGTTTCGGGATTTGGCTGGCTCCCACATCCAGCACTGCA
AAGGCAGCGCATTCTTCATGAACAACAAGGGGAAGATTATCAAACTCAAC
ATCAACAGTCGAGTGGCAGTGGACGCAGCATTTTTCCATGAGATGCAGCC
AAACTACTCCCGGCCGTCACTCCGCGACGGAGGGGTAAAAGACAAGAATG
GGATAACGGTCGTCGACATACGTGCAATGCTCAAGGAGGGCCGCGAGCGA
GAGAAGGAGAGAATGCGAGGAGATGGGGTGGATGCACAACAGCTGAGCGA
GACCGATCTCTTGGCCGCCTGCCCAACAGTATGCTGTTTCAGCTTCAGGG
AGAAGATGTTCTGTATGTGAAACGCAACACCGAGAAGGTGATACCGTACA
TAGATATCAAGTCGGGAGGCCTACGCGACATCCTGCGCGTCGTGCTGCAC
GGCATCAAAGCTATTAGCTTGATGGAGGATAAGCCATCGGTGGGACAAAG
AAACATGCAAATATAAGATCGCCGAACCGGTGGAGACCAGCAGTAGCCTG
GACGACTATGCTGAATATGCATTCGTTGTCCGCGAACGTGTTGATGGTCG
CTCCTCACCAGGACGTTGACACCTCCCCATCAGTCCCCCAAGCCATTAAC
CAGCGACTTGAAAAACAATCTTTGCACACAATCGTTGTCGGAGAGCTGGA
GCCAGTCGTGGCTAAATTGGTGAAACAAGCCTTGTCCAACCCAGCCATAT
GGCCTGATGAGCTGCCGGCTACTCCTGTCTGTTCGTCCGGACCCTCCACG
CCGCCGTTTGATGCGGATGAACTGCAGAAGCAGCTGGTCAAAATCACCCG
CGATGGATGGCCTTCGGTTGAACTTTCCATGGCAATGAAGCCTGATCAAT
CCAGTTCTGCAAGCAATGAACAGGACGGCATTCAGGTTGGAAATGATCTC
GGATATCCGATCCATACTACACCGGATGACTTCAAATTGTTTAGAGAGTG
GGCATCTATATGCTCATTCAAAACAGTTGTGGAAAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000101-T1.utr5p1 | KJC3_000101-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:217529..221086 - |
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