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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:221262..223510+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000102-T1 ID=KJC3_000102-T1|Name=KJC3_000102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2249bp|location=Sequence derived from alignment at JC15F:221262..223510+ (Aspergillus niger KJC3)
CTTCTCTCCATTTCTCAAACATACTCTACCATGTCTGCCTGTGTAGTTTT
ATCGCAGTTTGCGGCTTTGGCAGCCCGCGCGGAATCAATGGAAAAGAAAC
TTTCTGCGAGGAAAATCCGGCCAACCCGAGATCAACTGGATCAATTTTGT
GAATATAGAGACAAGTTGAGAATGACCCTATCGAAACTTGACGCTGAGAT
CACGAGCCTAGTACAGCCTGACGAGGAAGCCATCAAGCTCCTGAATCGAA
TTCGGTCAGGGCAAAATTCCTTAGCGACTATCTCAATAGCCTTTTCAAGG
AATCTGATCCTGATTTTTAGTGGTCCTAAGGACTCTAGTCTGGACTCAGA
ACAAGTGACAGCGAACAAAAAGCACACTCGAACAAGGTGCCTGAAATTAA
GGAGCCAACATCCTCACGTAATACTGAAGTGGGCGCAAGCCCTTCCACCT
TCGACATGGAAGTCAAGAGGAATGACAGACAGTGCTTTCGATTACCTTCT
CAAAACGCTGGAAGCGGACCGATTGGAAAGTGTTTCACCTAAGGTACATT
ATATGTTGCAATCTTTGGGAGAGGAGGAGCCGTTAGATACGTGCGATGCT
TTCAAATCATTCGTTTCAGAGATTTTGAATACGACCACTGCAATTGAAAG
TGGAGACACCCCGAATACTAGCCAACAGAATAAAAGATCTCTTGCAACAG
AAACTACACATTGTGCTACGCCCAGAAAAATCGTGTGCACAGAAGGACGG
TTCCAAGGTTAGTGGATCGGACATTCGGAGCATCAGCAAACATTAACGAG
GCCAGGCGCGAACGAGAGCCGAGTAAATCAAATTGACAGGGAGGACGAAA
GGCAGCGACAACTCCAGCTGATGGAGAGAAGCAAACGCACGTAATTATAA
CTCCAGATAATGCCTTGATGAAGCTAATTGAGACAATAGAAATCGATTAT
AAGGGGTCGTCAATGCCGACTAGTAAGCTGCCGCTTTTGATTGACAAGCT
TCCCGCAGCAATAAAGAGCAGCGAGCAATGGAAATGGGAACGCAAAATAT
TCTTGGAGAATATTGGAATGTTGGAAGCGAATATGGTGGACAGAACGGAT
TGTCTGAATTTCTTCGTTCCCAAGGATCGAAATCACGACATCTCTATCAC
TCTAACCGTCGGTCACGAAGTTGGACTGGAGGTGATTGGTGAAGTAGAGG
CTATTGACGTGTGAAAGTCACAGTTGCCCCTATCACACGGACTCGGCATC
CGGAAGGTACAATCGCTGTATCTTCCTTTGAAGGGTCGTTTTCCCAGATC
GGAGGAGAATCATAGTCCACCTTCGGATCATAAATCATTATGGATTTGCC
TTTTCCTTTGATTTTCCTAGCATAGTCCGCCTCTCGAAACAATTTGAAGC
CCTTTATGTCGTATAAGACGTCGTCCTCCGCGATAAACCCAACGCCACCA
GACATTTCACAGAGACCGAGGGGAAATTTCTTCGCAATCGAGGCGATCCC
GGAATCGATATTGTGAGTCTAAGAAGGAATGTTGGGAGTCTAAGGAGTGA
CCAGCGAAGAAGGGTAGCTAATATTTTGTCAACATACACCAAAGCGCTTA
TATGAGTGAAGTTACCTCTAGCCCTTTTTCCTCCCAGCACATGCAAGGAC
GAGGTTTTTTTCTGCTCCGGTTGGGGGGAGGGTGTGCGGGAGGGGCAATT
GTCACATGACAAACTTCGCGGCCTAATCGGGTAGAAAGCACATTTCGAAA
CCGCGAGAGCAGCAAACGTTTCATATGAAGACAAGTCGAAAACAGAAAAT
TTATTTTGTTCCGTCGACTGTCATGAACTTTGAGTTAAAACCCTAAAAGA
AAAGAAGAAAAAGAAAAAGAGCCTCAACCTCTGATGTTAGATCAGCAGTC
TGGCACTGTCGCCAGCAGTGACAAGTTTAGTGAGGCGTCAGCCTTGCGGA
TCTCTCTTTGTGCTAGATATTATGTGCCTTGGCGATGGGAAACTCCGATC
CGAAAAACCAAGTCATGTTTAGCTGCGTTTCGATCATCCGACAAAAGACA
CCCACTACCCACTCTGGCCAAGTTGGAAAAATGCGGGAGTTTTAGTGGAT
TATGCAAGTACAACATCAACTATGTGAAACCTAAGTTTAAGAGTATGCCA
GCGCATTAAGGCACACTCCTAATGGTCTAGACCTCCTTATCAAATTTGAA
TTTGCCTCAGTCAGACCTTGCAACTAACCTTGCAATTCTTAGATTTACG back to topCoding sequence (CDS) from alignment at JC15F:221262..223510+ >KJC3_000102-T1 ID=KJC3_000102-T1|Name=KJC3_000102-T1|organism=Aspergillus niger KJC3|type=CDS|length=3249bp|location=Sequence derived from alignment at JC15F:221262..223510+ (Aspergillus niger KJC3)
ATGTCTGCCTGTGTAGTTTTATCGCAGTTTGCGGCTTTGGCAGCCCGCGC
GGAATCAATGGAAAAGAAACTTTCTGCGAGGAAAATCCGGCCAACCCGAG
ATCAACTGGATCAATTTTGTGAATATAGAGACAAGTTGAGAATGACCCTA
TCGAAACTTGACGCTGAGATCACGAGCCTAGTACAGCCTGACGAGGAAGC
CATCAAGCTCCTGAATCGAATTCGGTCAGGGCAAAATTCCTTAGCGACTA
TCTCAATAGCCTTTTCAAGGAATCTGATCCTGATTTTTAGTGGTCCTAAG
GACTCTAGTCTGGACTCAGAACAAGTGACAGCGAACAAAAAGCACACTCG
AACAAGGTGCCTGAAATTAAGGAGCCAACATCCTCACGTAATACTGAAGT
GGGCGCAAGCCCTTCCACCTTCGACATGGAAGTCAAGAGGAATGACAGAC
AGTGCTTTCGATTACCTTCTCAAAACGCTGGAAGCGGACCGATTGGAAAG
TGTTTCACCTAAGGTACATTATATGTTGCAATCTTTGGGAGAGGAGGAGC
CGTTAGATACGTGCGATGCTTTCAAATCATTCGTTTCAGAGATTTTGAAT
ACGACCACTGCAATTGAAAGTGGAGACACCCCGAATACTAGCCAACAGAA
TAAAAGATCTCTTGCAACAGAAACTACACATTGTGCTACGCCCAGAAAAA
TCGTGTGCACAGAAGGACGGTTCCAAGGCGCGAACGAGAGCCGAGTAAAT
CAAATTGACAGGGAGGACGAAAGGCAGCGACAACTCCAGCTGATGGAGAG
AAGCAAACAAATCGATTATAAGGGGTCGTCAATGCCGACTAGTAAGCTGC
CGCTTTTGATTGACAAGCTTCCCGCAGCAATAAAGAGCAGCGAGCAATGG
AAATGGGAACGCAAAATATTCTTGGAGAATATTGGAATGTTGGAAGCGAA
TATGGTGGACAGAACGGATTGTCTGAATTTCTTCGTTCCCAAGGATCGAA
ATCACGACATCTCTATCACTCTAACCGTCGGTCACGAAGTTGGACTGGAG
GTGATTGGTGAAGTAGAGGCTATTGACGTGTGAATGTCTGCCTGTGTAGT
TTTATCGCAGTTTGCGGCTTTGGCAGCCCGCGCGGAATCAATGGAAAAGA
AACTTTCTGCGAGGAAAATCCGGCCAACCCGAGATCAACTGGATCAATTT
TGTGAATATAGAGACAAGTTGAGAATGACCCTATCGAAACTTGACGCTGA
GATCACGAGCCTAGTACAGCCTGACGAGGAAGCCATCAAGCTCCTGAATC
GAATTCGGTCAGGGCAAAATTCCTTAGCGACTATCTCAATAGCCTTTTCA
AGGAATCTGATCCTGATTTTTAGTGGTCCTAAGGACTCTAGTCTGGACTC
AGAACAAGTGACAGCGAACAAAAAGCACACTCGAACAAGGTGCCTGAAAT
TAAGGAGCCAACATCCTCACGTAATACTGAAGTGGGCGCAAGCCCTTCCA
CCTTCGACATGGAAGTCAAGAGGAATGACAGACAGTGCTTTCGATTACCT
TCTCAAAACGCTGGAAGCGGACCGATTGGAAAGTGTTTCACCTAAGGTAC
ATTATATGTTGCAATCTTTGGGAGAGGAGGAGCCGTTAGATACGTGCGAT
GCTTTCAAATCATTCGTTTCAGAGATTTTGAATACGACCACTGCAATTGA
AAGTGGAGACACCCCGAATACTAGCCAACAGAATAAAAGATCTCTTGCAA
CAGAAACTACACATTGTGCTACGCCCAGAAAAATCGTGTGCACAGAAGGA
CGGTTCCAAGGCGCGAACGAGAGCCGAGTAAATCAAATTGACAGGGAGGA
CGAAAGGCAGCGACAACTCCAGCTGATGGAGAGAAGCAAACAAATCGATT
ATAAGGGGTCGTCAATGCCGACTAGTAAGCTGCCGCTTTTGATTGACAAG
CTTCCCGCAGCAATAAAGAGCAGCGAGCAATGGAAATGGGAACGCAAAAT
ATTCTTGGAGAATATTGGAATGTTGGAAGCGAATATGGTGGACAGAACGG
ATTGTCTGAATTTCTTCGTTCCCAAGGATCGAAATCACGACATCTCTATC
ACTCTAACCGTCGGTCACGAAGTTGGACTGGAGGTGATTGGTGAAGTAGA
GGCTATTGACGTGTGAATGTCTGCCTGTGTAGTTTTATCGCAGTTTGCGG
CTTTGGCAGCCCGCGCGGAATCAATGGAAAAGAAACTTTCTGCGAGGAAA
ATCCGGCCAACCCGAGATCAACTGGATCAATTTTGTGAATATAGAGACAA
GTTGAGAATGACCCTATCGAAACTTGACGCTGAGATCACGAGCCTAGTAC
AGCCTGACGAGGAAGCCATCAAGCTCCTGAATCGAATTCGGTCAGGGCAA
AATTCCTTAGCGACTATCTCAATAGCCTTTTCAAGGAATCTGATCCTGAT
TTTTAGTGGTCCTAAGGACTCTAGTCTGGACTCAGAACAAGTGACAGCGA
ACAAAAAGCACACTCGAACAAGGTGCCTGAAATTAAGGAGCCAACATCCT
CACGTAATACTGAAGTGGGCGCAAGCCCTTCCACCTTCGACATGGAAGTC
AAGAGGAATGACAGACAGTGCTTTCGATTACCTTCTCAAAACGCTGGAAG
CGGACCGATTGGAAAGTGTTTCACCTAAGGTACATTATATGTTGCAATCT
TTGGGAGAGGAGGAGCCGTTAGATACGTGCGATGCTTTCAAATCATTCGT
TTCAGAGATTTTGAATACGACCACTGCAATTGAAAGTGGAGACACCCCGA
ATACTAGCCAACAGAATAAAAGATCTCTTGCAACAGAAACTACACATTGT
GCTACGCCCAGAAAAATCGTGTGCACAGAAGGACGGTTCCAAGGCGCGAA
CGAGAGCCGAGTAAATCAAATTGACAGGGAGGACGAAAGGCAGCGACAAC
TCCAGCTGATGGAGAGAAGCAAACAAATCGATTATAAGGGGTCGTCAATG
CCGACTAGTAAGCTGCCGCTTTTGATTGACAAGCTTCCCGCAGCAATAAA
GAGCAGCGAGCAATGGAAATGGGAACGCAAAATATTCTTGGAGAATATTG
GAATGTTGGAAGCGAATATGGTGGACAGAACGGATTGTCTGAATTTCTTC
GTTCCCAAGGATCGAAATCACGACATCTCTATCACTCTAACCGTCGGTCA
CGAAGTTGGACTGGAGGTGATTGGTGAAGTAGAGGCTATTGACGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000102-T1.utr5p1 | KJC3_000102-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000102-T1.utr3p1 | KJC3_000102-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:221262..223510 + |
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