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KJC3_000104-T1, KJC3_000104-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000104-T1
Unique NameKJC3_000104-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:224914..226687+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000104-T1 ID=KJC3_000104-T1|Name=KJC3_000104-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1774bp|location=Sequence derived from alignment at JC15F:224914..226687+ (Aspergillus niger KJC3)
CACCAAAGTTGCATCTCCCCTAGTGCTCGCCCTTCTATTGATTGAAGTCT
TCATTGACGTTATGGACACTAACGCACTTATCGATCTCGTTCACGAGATG
CAAGGTCAAATTTGGGTTGACAAAGTGAACGAGTCCTACAGAACGGGCCG
TCTCTGCCAGTGGGTGTCGACTTTCCATCCCGATAAACTTCACTGTCAAC
TTGATGGTACCTTTCACCATGGTGCATTTAATGCCGGTATGAAGATGGTC
TTCTGTGACAGTACTGCCTGGATGGTTCGTTTCCCTCGTGTGGGGATGGT
TTGTGACGACTACGCCGACGAGAAGGTTGCCATGGAGGTCACGGCTCTAG
GTCTCATCCGCAATCGGACTACCATTCCCGTCCCGAGAGTCTGGGCGTGG
GGTCCCGCTGCCAGCAACCCACTTGGTCTGGGCCCCTTTATCATAATGGA
CTTCATTGATGGTGTGAGCCTTAGCGATCTTCTCCAGGACCCCAACACCG
AAAGCCCCAACAGAGTTATAAGAGAGGATATCAGCGACAGTGATATAGAA
AATATCTACAGGCAGTTAGCGAAATTTTTGCTTCAGCTTTTCAAACTCGA
TTTTGACCGGATTGGCAGCCTGGTATCACCACAGGCTGAAGCCCAGAGCC
CTACACCGCCACGACCCCTAACTTTCAAAGCACATAGCATCCTACAGAAT
GGAGGAGTTGACACTTTTGGTATGCCTTATTGTCTTCTTTTTTTTTTCTT
TTCTTCCTAGATTCTAAATTTCTTGACTGATCTAGTGGATTAACTGAAGT
AAATGATGTCTAGGTGACCGAGCCCAGGGGTTTGCAACAACGACTGAGTA
TTTTCAATATATTGCCGGGCAGGACTGGGAGCAACTTGTCCAGCAGCCGA
ACTCAATTGTTGGTTTATATGATTCCAAAAACAAATATGTAGCGTTCAAG
GTCCTCAAATCCCTGATACCTGACTTGGTCAACGCGAAGTATGACCGTTG
CAAGTTTAAGCTGATTTGCGACGACCTTGGCCTGGCAAACCTAATTGTCC
GTGGCAGGCAAGACCTCACGGTTATTGGAGTAGTGGACCTCGAGTGGTCT
TACATCGGACCCGCCCAGCTGTTTGGCTCGGCGCCGTGGTGGCTTCTTCA
GGACAGGCCCGTCAATAGCACGTGGGATTACAAGGGCGACGAGCCGCCTA
AGATTGCTACCCGGTACTTCAAATATCTAGATATTTTTATACGGGTCTTG
GAAGAGGAAGAGGCAAAGATGCCAGAACATAAGGAGAGAGAACTCTCTAG
TCTCGTCAAGTGGTCACAAGCCTCCGGAGCCATGTGGCTGCACATGCTCC
TCTCATCTGGATTCAATGATCATCGCAGTTTTCCTTTTACGCAACTGCGT
CGACATTTGGGGGCTGAGTGGGCGAGGCGTGAGAAGGCATTTGACCACGC
AGAAGAGCTTCAGGCGTTCGCGGAGTGGAAGGTGAACGAGTTGGATAAGT
ATGATGAAGCCTTGGAGAAGATGGAGGAGAACAAAGCGCTCGTGGACAGC
GGAAATATGACAAAGCAGGAATTCATTTCCAAGGCTTTAAGAGAGCTAGG
CTGTATCCCCTGTTCCTCGTCGTCTGTTATGGATGGTGTAATAAAAAATG
ACGAGGGATTGCTCCATAAGGTGGCTGCCTGGCTTGGCTTGCAAGCTGGA
AAGTTGAGAGCGGTCGGAAGGACAGGATGAGGAGATATTATATTACCAAA
ATGACTTAAGTTTTTGTTTCTTAA
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Coding sequence (CDS) from alignment at JC15F:224914..226687+

>KJC3_000104-T1 ID=KJC3_000104-T1|Name=KJC3_000104-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at JC15F:224914..226687+ (Aspergillus niger KJC3)
ATGGACACTAACGCACTTATCGATCTCGTTCACGAGATGCAAGGTCAAAT
TTGGGTTGACAAAGTGAACGAGTCCTACAGAACGGGCCGTCTCTGCCAGT
GGGTGTCGACTTTCCATCCCGATAAACTTCACTGTCAACTTGATGGTACC
TTTCACCATGGTGCATTTAATGCCGGTATGAAGATGGTCTTCTGTGACAG
TACTGCCTGGATGGTTCGTTTCCCTCGTGTGGGGATGGTTTGTGACGACT
ACGCCGACGAGAAGGTTGCCATGGAGGTCACGGCTCTAGGTCTCATCCGC
AATCGGACTACCATTCCCGTCCCGAGAGTCTGGGCGTGGGGTCCCGCTGC
CAGCAACCCACTTGGTCTGGGCCCCTTTATCATAATGGACTTCATTGATG
GTGTGAGCCTTAGCGATCTTCTCCAGGACCCCAACACCGAAAGCCCCAAC
AGAGTTATAAGAGAGGATATCAGCGACAGTGATATAGAAAATATCTACAG
GCAGTTAGCGAAATTTTTGCTTCAGCTTTTCAAACTCGATTTTGACCGGA
TTGGCAGCCTGGTATCACCACAGGCTGAAGCCCAGAGCCCTACACCGCCA
CGACCCCTAACTTTCAAAGCACATAGCATCCTACAGAATGGAGGAGTTGA
CACTTTTGGTGACCGAGCCCAGGGGTTTGCAACAACGACTGAGTATTTTC
AATATATTGCCGGGCAGGACTGGGAGCAACTTGTCCAGCAGCCGAACTCA
ATTGTTGGTTTATATGATTCCAAAAACAAATATGTAGCGTTCAAGGTCCT
CAAATCCCTGATACCTGACTTGGTCAACGCGAAGTATGACCGTTGCAAGT
TTAAGCTGATTTGCGACGACCTTGGCCTGGCAAACCTAATTGTCCGTGGC
AGGCAAGACCTCACGGTTATTGGAGTAGTGGACCTCGAGTGGTCTTACAT
CGGACCCGCCCAGCTGTTTGGCTCGGCGCCGTGGTGGCTTCTTCAGGACA
GGCCCGTCAATAGCACGTGGGATTACAAGGGCGACGAGCCGCCTAAGATT
GCTACCCGGTACTTCAAATATCTAGATATTTTTATACGGGTCTTGGAAGA
GGAAGAGGCAAAGATGCCAGAACATAAGGAGAGAGAACTCTCTAGTCTCG
TCAAGTGGTCACAAGCCTCCGGAGCCATGTGGCTGCACATGCTCCTCTCA
TCTGGATTCAATGATCATCGCAGTTTTCCTTTTACGCAACTGCGTCGACA
TTTGGGGGCTGAGTGGGCGAGGCGTGAGAAGGCATTTGACCACGCAGAAG
AGCTTCAGGCGTTCGCGGAGTGGAAGGTGAACGAGTTGGATAAGTATGAT
GAAGCCTTGGAGAAGATGGAGGAGAACAAAGCGCTCGTGGACAGCGGAAA
TATGACAAAGCAGGAATTCATTTCCAAGGCTTTAAGAGAGCTAGGCTGTA
TCCCCTGTTCCTCGTCGTCTGTTATGGATGGTGTAATAAAAAATGACGAG
GGATTGCTCCATAAGGTGGCTGCCTGGCTTGGCTTGCAAGCTGGAAAGTT
GAGAGCGGTCGGAAGGACAGGATGAATGGACACTAACGCACTTATCGATC
TCGTTCACGAGATGCAAGGTCAAATTTGGGTTGACAAAGTGAACGAGTCC
TACAGAACGGGCCGTCTCTGCCAGTGGGTGTCGACTTTCCATCCCGATAA
ACTTCACTGTCAACTTGATGGTACCTTTCACCATGGTGCATTTAATGCCG
GTATGAAGATGGTCTTCTGTGACAGTACTGCCTGGATGGTTCGTTTCCCT
CGTGTGGGGATGGTTTGTGACGACTACGCCGACGAGAAGGTTGCCATGGA
GGTCACGGCTCTAGGTCTCATCCGCAATCGGACTACCATTCCCGTCCCGA
GAGTCTGGGCGTGGGGTCCCGCTGCCAGCAACCCACTTGGTCTGGGCCCC
TTTATCATAATGGACTTCATTGATGGTGTGAGCCTTAGCGATCTTCTCCA
GGACCCCAACACCGAAAGCCCCAACAGAGTTATAAGAGAGGATATCAGCG
ACAGTGATATAGAAAATATCTACAGGCAGTTAGCGAAATTTTTGCTTCAG
CTTTTCAAACTCGATTTTGACCGGATTGGCAGCCTGGTATCACCACAGGC
TGAAGCCCAGAGCCCTACACCGCCACGACCCCTAACTTTCAAAGCACATA
GCATCCTACAGAATGGAGGAGTTGACACTTTTGGTGACCGAGCCCAGGGG
TTTGCAACAACGACTGAGTATTTTCAATATATTGCCGGGCAGGACTGGGA
GCAACTTGTCCAGCAGCCGAACTCAATTGTTGGTTTATATGATTCCAAAA
ACAAATATGTAGCGTTCAAGGTCCTCAAATCCCTGATACCTGACTTGGTC
AACGCGAAGTATGACCGTTGCAAGTTTAAGCTGATTTGCGACGACCTTGG
CCTGGCAAACCTAATTGTCCGTGGCAGGCAAGACCTCACGGTTATTGGAG
TAGTGGACCTCGAGTGGTCTTACATCGGACCCGCCCAGCTGTTTGGCTCG
GCGCCGTGGTGGCTTCTTCAGGACAGGCCCGTCAATAGCACGTGGGATTA
CAAGGGCGACGAGCCGCCTAAGATTGCTACCCGGTACTTCAAATATCTAG
ATATTTTTATACGGGTCTTGGAAGAGGAAGAGGCAAAGATGCCAGAACAT
AAGGAGAGAGAACTCTCTAGTCTCGTCAAGTGGTCACAAGCCTCCGGAGC
CATGTGGCTGCACATGCTCCTCTCATCTGGATTCAATGATCATCGCAGTT
TTCCTTTTACGCAACTGCGTCGACATTTGGGGGCTGAGTGGGCGAGGCGT
GAGAAGGCATTTGACCACGCAGAAGAGCTTCAGGCGTTCGCGGAGTGGAA
GGTGAACGAGTTGGATAAGTATGATGAAGCCTTGGAGAAGATGGAGGAGA
ACAAAGCGCTCGTGGACAGCGGAAATATGACAAAGCAGGAATTCATTTCC
AAGGCTTTAAGAGAGCTAGGCTGTATCCCCTGTTCCTCGTCGTCTGTTAT
GGATGGTGTAATAAAAAATGACGAGGGATTGCTCCATAAGGTGGCTGCCT
GGCTTGGCTTGCAAGCTGGAAAGTTGAGAGCGGTCGGAAGGACAGGATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000104KJC3_000104Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000104-T1.utr5p1KJC3_000104-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000104-T1.exon1KJC3_000104-T1.exon1Aspergillus niger KJC3exon
KJC3_000104-T1.exon2KJC3_000104-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000104-T1.cdsKJC3_000104-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000104-T1.utr3p1KJC3_000104-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000104-T1KJC3_000104-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011009
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:224914..226687 +
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