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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC16F:8604..12643+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000107-T1 ID=KJC3_000107-T1|Name=KJC3_000107-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4040bp|location=Sequence derived from alignment at JC16F:8604..12643+ (Aspergillus niger KJC3)
TGCAAAGTTGTTGAATCGTCCTTCAATACTACACTCCGTCGAGAATGTCA
GGTTTGTCCGCTGCACCCCGTCTATCGACCACGGACACAATATATCTGCT
TCATCACGTCTTCCTGCCCCCCAAACTGCCACAGGAAGATGATTATAACG
ATTCACATGAAAGTGCTCTGCTCGATGGCGTTATTGATGCCCTCGCTCTG
TTTCAGGAATATAGTCATGGGCAGGAAAGTGAAGTTGTTGACAGTGTCAA
AGTGATGCTCACTCGTTTGAGAGCGACGCGTGATTGTCATGGGGACGTGA
ATCACGTCGAGCTTCAAAAGGCTCTATAAGAATTGGAGAATTCAGGTATG
GCCAGCTATAACTTAGCTGACATCCGGGATGACACTGACACGTGTTGCGT
AGGAGGTGCTCTACCTGTGCATGTTCGTTGCCAGAATGCTGCGGTCTTAA
TGACCAGGCACAGCGATTCAATACATGTCGAGACGTTTGAACTATCACCT
CGGAACGAAGCCGTCAACACTACGGTGGGTCGACTCCAACGCCAATTTCC
TGGGCCAAGCTTTGCTTTGGATCGAGCCGTCTTCAATGAACCAAATATGC
AAACTACCATTGCGCACGCCCTGGAGAGCATGAGTCGTCAGCCTGCCCCG
GGAACCAAGCCAAAAGTGAAGAAGGCGCGGCAGGAGCACGACGAGAATCG
GGATACAACCGATCCGATGCTGGTTACAGAGTTGTTCACATCATTCCTTC
GCCCACAATGCAAAATTGTGAACAGCTTGCAGGTCTGTAAGAACACAAGG
GAAGAGGTCCTGTGGCTCAACAGTCTGCAACCTTGGAGACGGTCCGCCCT
CTGGCTCCAGATTCGAGTTACGATGCAATTGGTCATTCGGAGGCTCTTCC
AGCGCAAAGAAATCTCAGCCGACCTTTATAAAGAATTCATGATCTTTTAC
ATGAGTTCCATTCTCCGCCGCTGTCCCAGGAGCATAAGCAGTGAGCATCG
GTATATTATGACTTCCAAAATCGTGCGCCGGTTACGAAAGCTTGATCTGG
CGGATGATCATGCTTGGCTTCCGTTTGTCCAGTGTTCCCTTCAACAAGCG
AATGACGTCCTAGAAGAAAGATGGAGCAGCATCCTCGCCCGTAACGCCTG
CCGACCTGACATGTCTTCCATGGCTCGACTCAACTTTCAAGATGACACTA
ATTGCTCACTGCCCGGTCTTGATGAGTGGCTTCAGAGCATCAGAACCCGC
CAAGACTCCTCAGTGCCGCCAGATGCCTACTCACAGTCTGGATTCTTGGA
TTTTGAGCCTGCAGAGCTCCCATCGCTCTTCCGACTGACTGACCCCGACT
ATCACGTCTACAATCTCGCTGCCTTCGAAGCTTGGGTTGACTTGAATCTT
CAATCCTGGACTGAGACACATATTAGCCATGAAGACACCTGCGAACGACT
AAGCAGATTAGTCAATGCCTATTATAGTATTGCATCCAAATTGTACGCTG
CTAATCCTGAGGCATTGTCAGCCATGCTTCTCACCATTCTGGAGCTCTGG
ATAGCTTGCGACAAATCCGCCGTCCATATTCATCCGCTGCTTCGCCAGTA
CAAGACTTGTATTCCGATACATCTCTTCCAGTCTCTCCTGTTACCTCGTC
AATCCCAGCTTACCAGGTTGGCACACGCGGAAAGGTACATGCGTCAACGC
CACCAGGGCGTCCAGTACAGAGGTTCCAAAATTCTAACCGACTTTGGAAC
CCCTTCCTCCTTTTCCGTGCGCTACTTCAAGCAGTCCGCTGAACACCAAC
GTTTGCTTGCCACTATTGAACAAAGAGCTGAATCCGAGAAGGCGGACAAA
GTTGTGGAGCTGCACCGAAAACATGAGCAGTATAGGGAGTTATGTGCTCG
CCGTGATGAGATTGAATGCACTTACTACGATGAGAGACTCGACAACCGGT
TCCACTTTACAGAGCGTCGTCATAGCCCCTCGTGCCAGAGATGTAGGTTG
GACCGTGCTGCGAAAGAGATCACAATTCATGTTCATGAATGGCCTTTGTC
TTCCAATCCCTTGGAAGCAGAATCCACGGTCTTCGAGTTGAAACTGCCCC
GACCATTAGCATTCTGGCGTGATCTCACTGCCTTCATTGTGCTTGAAATT
TTGGGAATCACATATGCTTCGAAAGAAACGCCTAGAGCGGAGTACCGACC
AGGCAGCTACAGTGGCCTCTCCATGTTCTTCACCGCGGTCGTTGATTCCC
CAAGGATTGGCCTTCTTTCCCAAGTTAAACCACACCAAGGAACTCACAGG
CGAAAGAACCACATTATCAATGTATCAGAGAGCGACGTTTGTCTTGCGAA
CGGTTTGTATTTCAAATACTTCGACAATGCCCACCGCTGCTTCACCGACG
ATCTGGTCCAAATACATGCGATGGCAACGGCATGCACGTACAAGTTACCG
CCATCCAGCTCATCTCTACAGCCGTTTCTCTTCCGCCCAGCGGAGACACC
TGACGGCCCGTCACCCAATACGGTCATTGCATCGCAGCATACCTGCCCCA
ATGACATGTCACTGGGAGAGTATAAGGCGCTCTGCTCGATGCCATTGGGC
TTCCATATCCAGTGGCAGAACATCCTTCGGCAGCTCGCCGCACCCACGGT
GGTGTTCAATAAGGTCGAAACGTGCCTTTTTACCCTGCAGATCATGCACC
AGGCAGGGCCGCCATCGCTCATGGATCCAATCCTGCGCGAAGGCCATCAT
GTTCTGAACGAAGATTTGTTCGCAGCGCCTTTACTGCGAGAGATCCAGAA
GACAGCGGCGGCAATCGAACAAAACTGGCAATCCGCAGAGGGGCTAAGCG
TATTGATCGCTCTCACCCAGAAGGTGTTGGCCTGCTCCCCATCGGTCCAC
ATTCAGAACAAATGCATAGAGCAGCTGGATGGCCTCCGGAAGATATCTTT
CGGTTGGGTGATGACTGTTGGGGAGGAGGCCGGTGCTACGGACAGTAATG
ATCACAGGAACGATCTGATTGCCTCCGCCGCTTATCTCGCGTTGATGTGC
GTGGGCACGTTTGATTGCGAGAACAGCCACTTGGAGCGAATACTCCGGAA
CGATCTGGATGCGTCCGTTTTCATCCAATGCAGTATGGTCATTCATGACC
GAAAAGGCCTTCTAAAGAGGGTATCCAGCTGTTTACTGCCAATTCTCTAC
TATCGATGGCAGAACATAGCCTTTCGGGGACACCGCATTCTCGTGAACAA
CACTATCCATGGCCGCAGGACCGCTCTCGACCGAGCGATCCATCGGACTT
GGGCCGCGTACCGACCAGGATCACCGTGGACAGCAGCCTCGAGTGGCACT
CAATGTTGCCTGCACGCCCAGGTTATGGGTGAATCAGGTGGTGCCAGCGG
CGTCGGGGTGTACGTTAACCTTCTCACTGGTCAGCTGCTCATCAATGGTC
GTCCCCTGGCGCGGTTGCCCTCAGAGTTCGAGCGCCATAAAACATATCAA
TCCCTGTTTGGGCATTCCTTAGTGGAAGTGATGCCCAGCGACCTTTCTGG
CTTGGAATACTCCGCCCAGAGACTGCATATGGGCCAGACGATCTACCTGG
GAAAACAGACGATCCCCGAGCAGAGTGGGTTCGATCTACGCATTCGAGCC
GTGGATGGGCGTAGAGTATGGGAATTCGTACCCCCGAGGCTTCTCGCAGC
TGCTTTACCAGATGCCTTCGTTGAGGGATACGCCCATTGGTACGAGACCA
ATTGCGAGTATATCGAGTTTCGACCTATTAACGAGCCATGGAAGCCATCA
CCTGCCTCTCACTGGCGATTGCAGCGCACCCAGCCGGGAAATAACTGGCA
GCTCACTCAGGGAAATATGTCGTTAATTAGTATGGGAAGCGAGACAGCGA
GAACGTTGTGTGATGTCTTCCAACCCATCGAAAAGGCCTCCAAGCTTCAC
TACAAACTGCACCACGAATCTGGCATGCTGGAGATCGAGATTCCCCGCCT
GCGGCTGAGCTTTAATCTGCGATCTGGTCAACCGTATTGA back to topCoding sequence (CDS) from alignment at JC16F:8604..12643+ >KJC3_000107-T1 ID=KJC3_000107-T1|Name=KJC3_000107-T1|organism=Aspergillus niger KJC3|type=CDS|length=3693bp|location=Sequence derived from alignment at JC16F:8604..12643+ (Aspergillus niger KJC3)
ATGGCCAGCTATAACTTAGCTGACATCCGGGATGACACTGACACGTGTTG
CGTAGGAGGTGCTCTACCTGTGCATGTTCGTTGCCAGAATGCTGCGGTCT
TAATGACCAGGCACAGCGATTCAATACATGTCGAGACGTTTGAACTATCA
CCTCGGAACGAAGCCGTCAACACTACGGTGGGTCGACTCCAACGCCAATT
TCCTGGGCCAAGCTTTGCTTTGGATCGAGCCGTCTTCAATGAACCAAATA
TGCAAACTACCATTGCGCACGCCCTGGAGAGCATGAGTCGTCAGCCTGCC
CCGGGAACCAAGCCAAAAGTGAAGAAGGCGCGGCAGGAGCACGACGAGAA
TCGGGATACAACCGATCCGATGCTGGTTACAGAGTTGTTCACATCATTCC
TTCGCCCACAATGCAAAATTGTGAACAGCTTGCAGGTCTGTAAGAACACA
AGGGAAGAGGTCCTGTGGCTCAACAGTCTGCAACCTTGGAGACGGTCCGC
CCTCTGGCTCCAGATTCGAGTTACGATGCAATTGGTCATTCGGAGGCTCT
TCCAGCGCAAAGAAATCTCAGCCGACCTTTATAAAGAATTCATGATCTTT
TACATGAGTTCCATTCTCCGCCGCTGTCCCAGGAGCATAAGCAGTGAGCA
TCGGTATATTATGACTTCCAAAATCGTGCGCCGGTTACGAAAGCTTGATC
TGGCGGATGATCATGCTTGGCTTCCGTTTGTCCAGTGTTCCCTTCAACAA
GCGAATGACGTCCTAGAAGAAAGATGGAGCAGCATCCTCGCCCGTAACGC
CTGCCGACCTGACATGTCTTCCATGGCTCGACTCAACTTTCAAGATGACA
CTAATTGCTCACTGCCCGGTCTTGATGAGTGGCTTCAGAGCATCAGAACC
CGCCAAGACTCCTCAGTGCCGCCAGATGCCTACTCACAGTCTGGATTCTT
GGATTTTGAGCCTGCAGAGCTCCCATCGCTCTTCCGACTGACTGACCCCG
ACTATCACGTCTACAATCTCGCTGCCTTCGAAGCTTGGGTTGACTTGAAT
CTTCAATCCTGGACTGAGACACATATTAGCCATGAAGACACCTGCGAACG
ACTAAGCAGATTAGTCAATGCCTATTATAGTATTGCATCCAAATTGTACG
CTGCTAATCCTGAGGCATTGTCAGCCATGCTTCTCACCATTCTGGAGCTC
TGGATAGCTTGCGACAAATCCGCCGTCCATATTCATCCGCTGCTTCGCCA
GTACAAGACTTGTATTCCGATACATCTCTTCCAGTCTCTCCTGTTACCTC
GTCAATCCCAGCTTACCAGGTTGGCACACGCGGAAAGGTACATGCGTCAA
CGCCACCAGGGCGTCCAGTACAGAGGTTCCAAAATTCTAACCGACTTTGG
AACCCCTTCCTCCTTTTCCGTGCGCTACTTCAAGCAGTCCGCTGAACACC
AACGTTTGCTTGCCACTATTGAACAAAGAGCTGAATCCGAGAAGGCGGAC
AAAGTTGTGGAGCTGCACCGAAAACATGAGCAGTATAGGGAGTTATGTGC
TCGCCGTGATGAGATTGAATGCACTTACTACGATGAGAGACTCGACAACC
GGTTCCACTTTACAGAGCGTCGTCATAGCCCCTCGTGCCAGAGATGTAGG
TTGGACCGTGCTGCGAAAGAGATCACAATTCATGTTCATGAATGGCCTTT
GTCTTCCAATCCCTTGGAAGCAGAATCCACGGTCTTCGAGTTGAAACTGC
CCCGACCATTAGCATTCTGGCGTGATCTCACTGCCTTCATTGTGCTTGAA
ATTTTGGGAATCACATATGCTTCGAAAGAAACGCCTAGAGCGGAGTACCG
ACCAGGCAGCTACAGTGGCCTCTCCATGTTCTTCACCGCGGTCGTTGATT
CCCCAAGGATTGGCCTTCTTTCCCAAGTTAAACCACACCAAGGAACTCAC
AGGCGAAAGAACCACATTATCAATGTATCAGAGAGCGACGTTTGTCTTGC
GAACGGTTTGTATTTCAAATACTTCGACAATGCCCACCGCTGCTTCACCG
ACGATCTGGTCCAAATACATGCGATGGCAACGGCATGCACGTACAAGTTA
CCGCCATCCAGCTCATCTCTACAGCCGTTTCTCTTCCGCCCAGCGGAGAC
ACCTGACGGCCCGTCACCCAATACGGTCATTGCATCGCAGCATACCTGCC
CCAATGACATGTCACTGGGAGAGTATAAGGCGCTCTGCTCGATGCCATTG
GGCTTCCATATCCAGTGGCAGAACATCCTTCGGCAGCTCGCCGCACCCAC
GGTGGTGTTCAATAAGGTCGAAACGTGCCTTTTTACCCTGCAGATCATGC
ACCAGGCAGGGCCGCCATCGCTCATGGATCCAATCCTGCGCGAAGGCCAT
CATGTTCTGAACGAAGATTTGTTCGCAGCGCCTTTACTGCGAGAGATCCA
GAAGACAGCGGCGGCAATCGAACAAAACTGGCAATCCGCAGAGGGGCTAA
GCGTATTGATCGCTCTCACCCAGAAGGTGTTGGCCTGCTCCCCATCGGTC
CACATTCAGAACAAATGCATAGAGCAGCTGGATGGCCTCCGGAAGATATC
TTTCGGTTGGGTGATGACTGTTGGGGAGGAGGCCGGTGCTACGGACAGTA
ATGATCACAGGAACGATCTGATTGCCTCCGCCGCTTATCTCGCGTTGATG
TGCGTGGGCACGTTTGATTGCGAGAACAGCCACTTGGAGCGAATACTCCG
GAACGATCTGGATGCGTCCGTTTTCATCCAATGCAGTATGGTCATTCATG
ACCGAAAAGGCCTTCTAAAGAGGGTATCCAGCTGTTTACTGCCAATTCTC
TACTATCGATGGCAGAACATAGCCTTTCGGGGACACCGCATTCTCGTGAA
CAACACTATCCATGGCCGCAGGACCGCTCTCGACCGAGCGATCCATCGGA
CTTGGGCCGCGTACCGACCAGGATCACCGTGGACAGCAGCCTCGAGTGGC
ACTCAATGTTGCCTGCACGCCCAGGTTATGGGTGAATCAGGTGGTGCCAG
CGGCGTCGGGGTGTACGTTAACCTTCTCACTGGTCAGCTGCTCATCAATG
GTCGTCCCCTGGCGCGGTTGCCCTCAGAGTTCGAGCGCCATAAAACATAT
CAATCCCTGTTTGGGCATTCCTTAGTGGAAGTGATGCCCAGCGACCTTTC
TGGCTTGGAATACTCCGCCCAGAGACTGCATATGGGCCAGACGATCTACC
TGGGAAAACAGACGATCCCCGAGCAGAGTGGGTTCGATCTACGCATTCGA
GCCGTGGATGGGCGTAGAGTATGGGAATTCGTACCCCCGAGGCTTCTCGC
AGCTGCTTTACCAGATGCCTTCGTTGAGGGATACGCCCATTGGTACGAGA
CCAATTGCGAGTATATCGAGTTTCGACCTATTAACGAGCCATGGAAGCCA
TCACCTGCCTCTCACTGGCGATTGCAGCGCACCCAGCCGGGAAATAACTG
GCAGCTCACTCAGGGAAATATGTCGTTAATTAGTATGGGAAGCGAGACAG
CGAGAACGTTGTGTGATGTCTTCCAACCCATCGAAAAGGCCTCCAAGCTT
CACTACAAACTGCACCACGAATCTGGCATGCTGGAGATCGAGATTCCCCG
CCTGCGGCTGAGCTTTAATCTGCGATCTGGTCAACCGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000107-T1.utr5p1 | KJC3_000107-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC16F | supercontig | JC16F:8604..12643 + |
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