You are here

Home

KJC3_000110-T1, KJC3_000110-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000110-T1
Unique NameKJC3_000110-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC16F:46549..47790-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000110-T1 ID=KJC3_000110-T1|Name=KJC3_000110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1242bp|location=Sequence derived from alignment at JC16F:46549..47790- (Aspergillus niger KJC3)
ATGCCCTCGAATCCTTTCTTATCAATTGCCCTTCAAACTGCCGTGGTGGT
GACCACACTGGGCTTCACCTCGGCCCTGTCAAGCCTGAGGCCTGGCGCAT
TGGTCATTGTCGCACTATGTACTGGCCATTGTATCTCCACCGCATTGGGA
TACTTCGTTCGGACACCATGGGCCAGCCTGGCAGGTGGTTATTCGGTCAT
GTTACTGCTTCATTATATCGACATAGGTTTGTTGACGCGGTGGGAATTTG
CTGACCCCTCCGCGGCGAAATCGCCCGAGGCGCTAAATTCAACCTGGGTG
GCCCGTGTACGGTTTGGTATCTGGGCGGCCTTCAATGCGCGATGCATTGG
AACGCGTGAGCAAGTGAACCATGTTCCTGAGGCGGTCACCTGCGACCGAG
CCGCATACCTCCGTCGATCTGCGGGAATTATCCTCCTCAGTTACCTGGGC
CTCGATGTGCTCGGCTCGATGGGCGATCCTGAGGTGGGATCTCGCTTCCT
CATTGCATCTCGTGTGCCGCTGTTTCGGAGAATTTCTGATATCACTACGG
AAGAGATCGTCATTCGAGTCTTCTCGGGCATTGCGGCTGGCATAGGCTTA
TTGGCCAGTCAGGGTGGTTTCTATTATCTCTTCGCATTCACCAGCGTTCT
TGCGAGGTGGAGTAAGCCGCAGGACTGGCCTCCTTTCTACGGAGCCTTGT
CGGATGCGTATAGCCTGCGAAGACTTTGGAGGTAAACACCCTCTGTTCTT
TTCTATTTTGGTATCGACTAATACCGGCATAGTCGCGTGTGGCACCAATC
AAATTCCCACAAATTCCGTACGATCTCTCGATTTTTCGCACGCGATGTCT
TTCGCTTCCAGCCAGGGACGCTTGCCGACCGATATGCCAAGGTCGTGATG
GTGTTTGCAACCTCAGCTTTCATGCACTTACTCATTGACCTGTCGTCGGG
GCTATCGCCCTCTAGCTCCGGGGCTGTACAGTTCTTCTGCACGCAGGCCT
TCGGATTAATGCTGGAAGATCTGGCCGTCAATGTCTACTCTCTTATACTT
CGTGGTGGCGGGCCGTCCCGCAACTGGACGGCGTCCCGCGGTGAACGGAT
ATTTGGATTTCTCTGGGTCGGAAGCTTTTTGGTCTGGTCGTTTCCTGCAT
ATCTTTATCCGATGTTGTATCGTTCCAACGCAGGTCTTAATGACTCGGTG
GTCCCTCTGAGCGTTGTTGGAATGTTACAAGGCAATTTCTGA
back to top

Coding sequence (CDS) from alignment at JC16F:46549..47790-

>KJC3_000110-T1 ID=KJC3_000110-T1|Name=KJC3_000110-T1|organism=Aspergillus niger KJC3|type=CDS|length=2382bp|location=Sequence derived from alignment at JC16F:46549..47790- (Aspergillus niger KJC3)
TCGCGTGTGGCACCAATCAAATTCCCACAAATTCCGTACGATCTCTCGAT
TTTTCGCACGCGATGTCTTTCGCTTCCAGCCAGGGACGCTTGCCGACCGA
TATGCCAAGGTCGTGATGGTGTTTGCAACCTCAGCTTTCATGCACTTACT
CATTGACCTGTCGTCGGGGCTATCGCCCTCTAGCTCCGGGGCTGTACAGT
TCTTCTGCACGCAGGCCTTCGGATTAATGCTGGAAGATCTGGCCGTCAAT
GTCTACTCTCTTATACTTCGTGGTGGCGGGCCGTCCCGCAACTGGACGGC
GTCCCGCGGTGAACGGATATTTGGATTTCTCTGGGTCGGAAGCTTTTTGG
TCTGGTCGTTTCCTGCATATCTTTATCCGATGTTGTATCGTTCCAACGCA
GGTCTTAATGACTCGGTGGTCCCTCTGAGCGTTGTTGGAATGTTACAAGG
CAATTTCTGAATGCCCTCGAATCCTTTCTTATCAATTGCCCTTCAAACTG
CCGTGGTGGTGACCACACTGGGCTTCACCTCGGCCCTGTCAAGCCTGAGG
CCTGGCGCATTGGTCATTGTCGCACTATGTACTGGCCATTGTATCTCCAC
CGCATTGGGATACTTCGTTCGGACACCATGGGCCAGCCTGGCAGGTGGTT
ATTCGGTCATGTTACTGCTTCATTATATCGACATAGGTTTGTTGACGCGG
TGGGAATTTGCTGACCCCTCCGCGGCGAAATCGCCCGAGGCGCTAAATTC
AACCTGGGTGGCCCGTGTACGGTTTGGTATCTGGGCGGCCTTCAATGCGC
GATGCATTGGAACGCGTGAGCAAGTGAACCATGTTCCTGAGGCGGTCACC
TGCGACCGAGCCGCATACCTCCGTCGATCTGCGGGAATTATCCTCCTCAG
TTACCTGGGCCTCGATGTGCTCGGCTCGATGGGCGATCCTGAGGTGGGAT
CTCGCTTCCTCATTGCATCTCGTGTGCCGCTGTTTCGGAGAATTTCTGAT
ATCACTACGGAAGAGATCGTCATTCGAGTCTTCTCGGGCATTGCGGCTGG
CATAGGCTTATTGGCCAGTCAGGGTGGTTTCTATTATCTCTTCGCATTCA
CCAGCGTTCTTGCGAGGTGGAGTAAGCCGCAGGACTGGCCTCCTTTCTAC
GGAGCCTTGTCGGATGCGTATAGCCTGCGAAGACTTTGGAGTCGCGTGTG
GCACCAATCAAATTCCCACAAATTCCGTACGATCTCTCGATTTTTCGCAC
GCGATGTCTTTCGCTTCCAGCCAGGGACGCTTGCCGACCGATATGCCAAG
GTCGTGATGGTGTTTGCAACCTCAGCTTTCATGCACTTACTCATTGACCT
GTCGTCGGGGCTATCGCCCTCTAGCTCCGGGGCTGTACAGTTCTTCTGCA
CGCAGGCCTTCGGATTAATGCTGGAAGATCTGGCCGTCAATGTCTACTCT
CTTATACTTCGTGGTGGCGGGCCGTCCCGCAACTGGACGGCGTCCCGCGG
TGAACGGATATTTGGATTTCTCTGGGTCGGAAGCTTTTTGGTCTGGTCGT
TTCCTGCATATCTTTATCCGATGTTGTATCGTTCCAACGCAGGTCTTAAT
GACTCGGTGGTCCCTCTGAGCGTTGTTGGAATGTTACAAGGCAATTTCTG
AATGCCCTCGAATCCTTTCTTATCAATTGCCCTTCAAACTGCCGTGGTGG
TGACCACACTGGGCTTCACCTCGGCCCTGTCAAGCCTGAGGCCTGGCGCA
TTGGTCATTGTCGCACTATGTACTGGCCATTGTATCTCCACCGCATTGGG
ATACTTCGTTCGGACACCATGGGCCAGCCTGGCAGGTGGTTATTCGGTCA
TGTTACTGCTTCATTATATCGACATAGGTTTGTTGACGCGGTGGGAATTT
GCTGACCCCTCCGCGGCGAAATCGCCCGAGGCGCTAAATTCAACCTGGGT
GGCCCGTGTACGGTTTGGTATCTGGGCGGCCTTCAATGCGCGATGCATTG
GAACGCGTGAGCAAGTGAACCATGTTCCTGAGGCGGTCACCTGCGACCGA
GCCGCATACCTCCGTCGATCTGCGGGAATTATCCTCCTCAGTTACCTGGG
CCTCGATGTGCTCGGCTCGATGGGCGATCCTGAGGTGGGATCTCGCTTCC
TCATTGCATCTCGTGTGCCGCTGTTTCGGAGAATTTCTGATATCACTACG
GAAGAGATCGTCATTCGAGTCTTCTCGGGCATTGCGGCTGGCATAGGCTT
ATTGGCCAGTCAGGGTGGTTTCTATTATCTCTTCGCATTCACCAGCGTTC
TTGCGAGGTGGAGTAAGCCGCAGGACTGGCCTCCTTTCTACGGAGCCTTG
TCGGATGCGTATAGCCTGCGAAGACTTTGGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000110KJC3_000110Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000110-T1KJC3_000110-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000110-T1.cdsKJC3_000110-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000110-T1.exon2KJC3_000110-T1.exon2Aspergillus niger KJC3exon
KJC3_000110-T1.exon1KJC3_000110-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR032805
DBxrefPFAM:PF13813
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC16FsupercontigJC16F:46549..47790 -
Powered by Drupal