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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC16F:71780..73720- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000112-T1 ID=KJC3_000112-T1|Name=KJC3_000112-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1941bp|location=Sequence derived from alignment at JC16F:71780..73720- (Aspergillus niger KJC3)
ATGGAGATACCGAGCTATAACAATCTCTACCGGAGCGCGATACGATGGAC
CACTCGTCAGCCAACGTTGAGCAAGACGGACCAGTTTGTTGTTTTCACGA
AAGCGAGTTTTTCCTCCCCGTGGGATGACGGCGATATAAATAACGATCAA
TATGACAATGACCCCAACGACATCTTCGACGATGAGCGGTTGTTTGAACA
TAACCCACGAGAATATTGGTTCAAGAGAAGGTGTCGGGATGCACATGGAG
GACTCAAGTCTACTCCTTCACAGGATCCTATCCATTGGTTTCGCTACAGA
GGACACGACGTTGGATTCCAACGACGCGTATCCAAGGAATCTAGTGGTCC
ATGGTTCGCTGCTCCGGAGACACTGACTTTCTACACTTACGATGATCGAG
GCGTCCTCGATGACATCATGCATGATATCCGGGAAACCCCCGTCAAGAAG
AACCCTCGCGATATCACTGTCTACACCGGTCTGAGCCAGCCTCTGTCATG
GGTGCCGATGGCGACGAAATCGCCACGATTCCTATCCTCAGTGGCTCTGG
ATCAGGAGGTAAAAATGGACATAGTGAAAGATGTGACGGAATTCTTTTAC
CCCCGAACTGAGCCATGTTACAAGGAACGTGGAATTCCCTATCGACGAGG
CATTGCCCTATACGGTCCGCCAGGTACAGGGAAGTCAAGCCTGTGTCATG
CCATCGCCAGCATGTTGTGTATGGATATATACACCTTCTCTCTGGGCTCC
TCTGGACTTAACGACAACACCCTCTCCGCTCTATTCCAAAAATGTCCGGA
GCGTTCCATTGTTCTCTTGGAGGATATCGATGCGGCCGGTGTACCGAAAC
GCGGTGGTGATATCTCTTCTGAGCCAAGCCAGGAGGCGACCGAAGGGGTT
GAGAATGCTGAGACACACAATACCGGATCAGAACAAGGAAGTATCTCTCT
CTCCGGCCTATTGAACGTGATTGATGGCGTGGCTGCGAAAGAAGGTCGCC
TTCTTTTCATAACTACCAATCACATTGACCGTCTGGACCCTGCCCTTTTG
CGTGCAGGGAGGGTTGACATGAAGGCCTTTATCGGCTATGCGAATGACCT
TATGGCTCGAGAGCTTTTTTACAAGCCTTGTTTGGTCCCTAAGGATACAC
AGTTCATGGCGGTCCGGCAAGAAAATGGCACCATCCAACCATTATCTGAA
CCAGTCTCTGATGAATGGGAACCGAACGACCTTGGTCGTCTAGCGAATCA
ATTCGCCAGCAATATTCCTCCGGGGTGGTTCTCGCCCGCCTCTTTGGAAG
GATACCTGCTGCGGCACAAAAACGATCCTGTTTCCGCAGCCTGCAGTGTT
AAGGAATGGGTAGATCAGAAAATCAGCTCCTTCAAAAACGGTCACGGACA
GGAGTTGTCAAGTCTTCGTGTTTCTGGATCACCCTGTCAATTTAGGCTTC
ACGGCGAATCGTTGTCCATTAGCGTGAGCGCTGTTATATTTGATGCAGCA
AACGGATCTGGTGAGCTTCGTGTTGTACTTCTGCAACGTGCGTCCCATTG
GGAACTACCAGGTGGTACAGTTGGGTCAACAGACAGTACAATATACGCTG
CTCTGAAGCGCAAGATCTTGGAGAAATCTGGGTTAGAGCTTTCACGAATC
AACAATGAACTCGAAATCCGGGCTCAGACGCGAAACAAGGAAGAAATATG
TGTTGCTTTTCTATGTATCTTTTATGTATCTCAGATAGAAGCCCCGAGAT
TCCCGGATGAGCTACCATTGGGAAGGAAATGCGATGAATCGGTACGGATC
AATGCGGAGAAACACCAGGGTTTTACGTGGGCAACGGAAGATGAGGTGCG
GAATGATGTATATCCGGTGCTCGGAGATCAGAAGGCGACTATTCTGGAAG
CGTTTGCTGCCACTCCTAGGAGTTCTTTGTGGCAGTCATGA back to topCoding sequence (CDS) from alignment at JC16F:71780..73720- >KJC3_000112-T1 ID=KJC3_000112-T1|Name=KJC3_000112-T1|organism=Aspergillus niger KJC3|type=CDS|length=1941bp|location=Sequence derived from alignment at JC16F:71780..73720- (Aspergillus niger KJC3)
ATGGAGATACCGAGCTATAACAATCTCTACCGGAGCGCGATACGATGGAC
CACTCGTCAGCCAACGTTGAGCAAGACGGACCAGTTTGTTGTTTTCACGA
AAGCGAGTTTTTCCTCCCCGTGGGATGACGGCGATATAAATAACGATCAA
TATGACAATGACCCCAACGACATCTTCGACGATGAGCGGTTGTTTGAACA
TAACCCACGAGAATATTGGTTCAAGAGAAGGTGTCGGGATGCACATGGAG
GACTCAAGTCTACTCCTTCACAGGATCCTATCCATTGGTTTCGCTACAGA
GGACACGACGTTGGATTCCAACGACGCGTATCCAAGGAATCTAGTGGTCC
ATGGTTCGCTGCTCCGGAGACACTGACTTTCTACACTTACGATGATCGAG
GCGTCCTCGATGACATCATGCATGATATCCGGGAAACCCCCGTCAAGAAG
AACCCTCGCGATATCACTGTCTACACCGGTCTGAGCCAGCCTCTGTCATG
GGTGCCGATGGCGACGAAATCGCCACGATTCCTATCCTCAGTGGCTCTGG
ATCAGGAGGTAAAAATGGACATAGTGAAAGATGTGACGGAATTCTTTTAC
CCCCGAACTGAGCCATGTTACAAGGAACGTGGAATTCCCTATCGACGAGG
CATTGCCCTATACGGTCCGCCAGGTACAGGGAAGTCAAGCCTGTGTCATG
CCATCGCCAGCATGTTGTGTATGGATATATACACCTTCTCTCTGGGCTCC
TCTGGACTTAACGACAACACCCTCTCCGCTCTATTCCAAAAATGTCCGGA
GCGTTCCATTGTTCTCTTGGAGGATATCGATGCGGCCGGTGTACCGAAAC
GCGGTGGTGATATCTCTTCTGAGCCAAGCCAGGAGGCGACCGAAGGGGTT
GAGAATGCTGAGACACACAATACCGGATCAGAACAAGGAAGTATCTCTCT
CTCCGGCCTATTGAACGTGATTGATGGCGTGGCTGCGAAAGAAGGTCGCC
TTCTTTTCATAACTACCAATCACATTGACCGTCTGGACCCTGCCCTTTTG
CGTGCAGGGAGGGTTGACATGAAGGCCTTTATCGGCTATGCGAATGACCT
TATGGCTCGAGAGCTTTTTTACAAGCCTTGTTTGGTCCCTAAGGATACAC
AGTTCATGGCGGTCCGGCAAGAAAATGGCACCATCCAACCATTATCTGAA
CCAGTCTCTGATGAATGGGAACCGAACGACCTTGGTCGTCTAGCGAATCA
ATTCGCCAGCAATATTCCTCCGGGGTGGTTCTCGCCCGCCTCTTTGGAAG
GATACCTGCTGCGGCACAAAAACGATCCTGTTTCCGCAGCCTGCAGTGTT
AAGGAATGGGTAGATCAGAAAATCAGCTCCTTCAAAAACGGTCACGGACA
GGAGTTGTCAAGTCTTCGTGTTTCTGGATCACCCTGTCAATTTAGGCTTC
ACGGCGAATCGTTGTCCATTAGCGTGAGCGCTGTTATATTTGATGCAGCA
AACGGATCTGGTGAGCTTCGTGTTGTACTTCTGCAACGTGCGTCCCATTG
GGAACTACCAGGTGGTACAGTTGGGTCAACAGACAGTACAATATACGCTG
CTCTGAAGCGCAAGATCTTGGAGAAATCTGGGTTAGAGCTTTCACGAATC
AACAATGAACTCGAAATCCGGGCTCAGACGCGAAACAAGGAAGAAATATG
TGTTGCTTTTCTATGTATCTTTTATGTATCTCAGATAGAAGCCCCGAGAT
TCCCGGATGAGCTACCATTGGGAAGGAAATGCGATGAATCGGTACGGATC
AATGCGGAGAAACACCAGGGTTTTACGTGGGCAACGGAAGATGAGGTGCG
GAATGATGTATATCCGGTGCTCGGAGATCAGAAGGCGACTATTCTGGAAG
CGTTTGCTGCCACTCCTAGGAGTTCTTTGTGGCAGTCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034551 | mitochondrial respiratory chain complex III assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015797 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003960 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR014851 |
| DBxref | InterPro:IPR000086 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF00293 |
| DBxref | PFAM:PF08740 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC16F | supercontig | JC16F:71780..73720 - |
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