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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC16F:97130..97662+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000119-T1 ID=KJC3_000119-T1|Name=KJC3_000119-T1|organism=Aspergillus niger KJC3|type=mRNA|length=533bp|location=Sequence derived from alignment at JC16F:97130..97662+ (Aspergillus niger KJC3)
ATGCTGAAGCAACGGAATCGAAGCCTGAAGGTTCTGCTGTCTATCGGAGG
CTGGACGTACTCCACAAACTTTGCACAGCCAGCGAGCAAGGATGGGGGAC
GGAAGAAATTTGCACAGACGGCTGTCAAGCTGCTCCAAGACCTAGGCCTC
GACGGCTTAGACATCGACTGGGAGGTAAGATGCGGCTCTCTTCTCGTTGG
ATGCTCTGCTCATGATAAGCACTGCGTCTAGTATCCCGAGAATGACCAAG
AGGCCAGCGACTATGTCCTTCTACTGAGGGAACTGAGACAGGTTGGTCTG
GACCTCGGAACAATTACCGCATGAGTCATTAATCTTGGGCAGGCTCTAGG
GGAATATAGCAATGGCCACGCGAGAGGGAAGAAATTTCTGCTCACTGCTG
CATCCCCTGCTAGTATGCTCAAGCATCTAAGAATTGTTTTATTTGCGTGG
GCCATTTGCTGACTGTCCTGACAGGCTCGGGAAAGCTAGACATCCTCCAT
CTTAAGGATATGGACGACTTGTTGGACTTCTGA back to topCoding sequence (CDS) from alignment at JC16F:97130..97662+ >KJC3_000119-T1 ID=KJC3_000119-T1|Name=KJC3_000119-T1|organism=Aspergillus niger KJC3|type=CDS|length=1452bp|location=Sequence derived from alignment at JC16F:97130..97662+ (Aspergillus niger KJC3)
ATGCTGAAGCAACGGAATCGAAGCCTGAAGGTTCTGCTGTCTATCGGAGG
CTGGACGTACTCCACAAACTTTGCACAGCCAGCGAGCAAGGATGGGGGAC
GGAAGAAATTTGCACAGACGGCTGTCAAGCTGCTCCAAGACCTAGGCCTC
GACGGCTTAGACATCGACTGGGAGTATCCCGAGAATGACCAAGAGGCCAG
CGACTATGTCCTTCTACTGAGGGAACTGAGACAGGCTCTAGGGGAATATA
GCAATGGCCACGCGAGAGGGAAGAAATTTCTGCTCACTGCTGCATCCCCT
GCTAGCTCGGGAAAGCTAGACATCCTCCATCTTAAGGATATGGACGACTT
GTTGGACTTCTGAATGCTGAAGCAACGGAATCGAAGCCTGAAGGTTCTGC
TGTCTATCGGAGGCTGGACGTACTCCACAAACTTTGCACAGCCAGCGAGC
AAGGATGGGGGACGGAAGAAATTTGCACAGACGGCTGTCAAGCTGCTCCA
AGACCTAGGCCTCGACGGCTTAGACATCGACTGGGAGTATCCCGAGAATG
ACCAAGAGGCCAGCGACTATGTCCTTCTACTGAGGGAACTGAGACAGGCT
CTAGGGGAATATAGCAATGGCCACGCGAGAGGGAAGAAATTTCTGCTCAC
TGCTGCATCCCCTGCTAGCTCGGGAAAGCTAGACATCCTCCATCTTAAGG
ATATGGACGACTTGTTGGACTTCTGAATGCTGAAGCAACGGAATCGAAGC
CTGAAGGTTCTGCTGTCTATCGGAGGCTGGACGTACTCCACAAACTTTGC
ACAGCCAGCGAGCAAGGATGGGGGACGGAAGAAATTTGCACAGACGGCTG
TCAAGCTGCTCCAAGACCTAGGCCTCGACGGCTTAGACATCGACTGGGAG
TATCCCGAGAATGACCAAGAGGCCAGCGACTATGTCCTTCTACTGAGGGA
ACTGAGACAGGCTCTAGGGGAATATAGCAATGGCCACGCGAGAGGGAAGA
AATTTCTGCTCACTGCTGCATCCCCTGCTAGCTCGGGAAAGCTAGACATC
CTCCATCTTAAGGATATGGACGACTTGTTGGACTTCTGAATGCTGAAGCA
ACGGAATCGAAGCCTGAAGGTTCTGCTGTCTATCGGAGGCTGGACGTACT
CCACAAACTTTGCACAGCCAGCGAGCAAGGATGGGGGACGGAAGAAATTT
GCACAGACGGCTGTCAAGCTGCTCCAAGACCTAGGCCTCGACGGCTTAGA
CATCGACTGGGAGTATCCCGAGAATGACCAAGAGGCCAGCGACTATGTCC
TTCTACTGAGGGAACTGAGACAGGCTCTAGGGGAATATAGCAATGGCCAC
GCGAGAGGGAAGAAATTTCTGCTCACTGCTGCATCCCCTGCTAGCTCGGG
AAAGCTAGACATCCTCCATCTTAAGGATATGGACGACTTGTTGGACTTCT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001579 |
| DBxref | InterPro:IPR001223 |
| Product | Endochitinase B1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC16F | supercontig | JC16F:97130..97662 + |
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