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KJC3_000126-T1, KJC3_000126-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000126-T1
Unique NameKJC3_000126-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC16F:177121..178162+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000126-T1 ID=KJC3_000126-T1|Name=KJC3_000126-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1042bp|location=Sequence derived from alignment at JC16F:177121..178162+ (Aspergillus niger KJC3)
AACGAACTTCTGAGGACACCAGGAAAAGAAAATGAGGTTTTATAGATGTT
GAGAAGTGAAGAAAGCCGTCTGACACATTTGTTGCCCTTTTTCTAACCAT
TTTGTCAAAAGGCTGGCCGACAACGCACTTTGAGATCGTCTCTTAGTCTC
TACTGTTTTTAGTACTAAGCCCCATCAATACTGCTTGTATGGTTACATGG
AAAGCCAGAAGCCTGCAGCTGGCGCTCCCACCCCTGAGTCCGATAAGCTG
AAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTACAGCACCGCTAT
CGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGAACCCCATCTACC
TCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAGCACGAGAAGGCG
GCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAAGTACTCCAAGGC
CTGGAGCCGTCTGGGACTGGCTCGTTTCGATTTGGCTGATTACCACGGTG
CCAAGGAGGCCTATGAGAAGGGTATCGAGGCCGAGGGCAACGGTGGCAGC
GAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAAGATCGAGGAGGC
CAAGCGTAGCACCGAGCCTCCCGCTGATGCCGTTGACGATGCTGCTGGTG
CTTCCCGTGGTGGTGGCGGTATGCCTGATCTCAGCTCTATCATGAGCAAC
CCCCAGCTGAGACAGATGGCTGAGAACTATGGCCGTGGCGGTGGTATGCC
CGACATGTCCTCTTTGATGAGCGATCCAAACATTGCTGAAATGTAAGTGA
CATGACATACCTGGTCCATTGCGTTGCAGCTGACACGTATCTTCTAGGGC
CCGGAACATGATGGGCGGTGGTGCCGGACGTGGAATCCAGTAAGCGGGAT
ATCCTGAATTTGTTAGCGTTTCGGAGCTTTATCTGTCCTTTGCATCTGAA
AATCATTGTCGCGCTCTCGCTTTCGTATACGTGCAATGTATGATCATCTT
AAATATGGAAGCGAATAGTTACGTCGCTATACTTGTCTGACA
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Coding sequence (CDS) from alignment at JC16F:177121..178162+

>KJC3_000126-T1 ID=KJC3_000126-T1|Name=KJC3_000126-T1|organism=Aspergillus niger KJC3|type=CDS|length=1284bp|location=Sequence derived from alignment at JC16F:177121..178162+ (Aspergillus niger KJC3)
ATGGAAAGCCAGAAGCCTGCAGCTGGCGCTCCCACCCCTGAGTCCGATAA
GCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTACAGCACCG
CTATCGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGAACCCCATC
TACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAGCACGAGAA
GGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAAGTACTCCA
AGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGATTTGGCTGATTACCAC
GGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCCGAGGGCAACGGTGG
CAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAAGATCGAGG
AGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCCGTTGACGATGCTGCT
GGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTCAGCTCTATCATGAG
CAACCCCCAGCTGAGACAGATGGCTGAGAACTATGGCCGTGGCGGTGGTA
TGCCCGACATGTCCTCTTTGATGAGCGATCCAAACATTGCTGAAATGGCC
CGGAACATGATGGGCGGTGGTGCCGGACGTGGAATCCAGTAAATGGAAAG
CCAGAAGCCTGCAGCTGGCGCTCCCACCCCTGAGTCCGATAAGCTGAAGT
CCGAGGGTAACGGTGCCATGGCCCGCAAGGACTACAGCACCGCTATCGAC
CTCTACACCCAAGCCCTGGCTATTGCTCCCTCGAACCCCATCTACCTCTC
CAACCGGGCTGCTGCCTATTCCGCGGCCGGACAGCACGAGAAGGCGGCCG
AGGATGCCGAGCTCGCCACTGCTGTTGACCCCAAGTACTCCAAGGCCTGG
AGCCGTCTGGGACTGGCTCGTTTCGATTTGGCTGATTACCACGGTGCCAA
GGAGGCCTATGAGAAGGGTATCGAGGCCGAGGGCAACGGTGGCAGCGAGG
CCATGAAGCGGGGTCTGGAGACTACTAAGCGCAAGATCGAGGAGGCCAAG
CGTAGCACCGAGCCTCCCGCTGATGCCGTTGACGATGCTGCTGGTGCTTC
CCGTGGTGGTGGCGGTATGCCTGATCTCAGCTCTATCATGAGCAACCCCC
AGCTGAGACAGATGGCTGAGAACTATGGCCGTGGCGGTGGTATGCCCGAC
ATGTCCTCTTTGATGAGCGATCCAAACATTGCTGAAATGGCCCGGAACAT
GATGGGCGGTGGTGCCGGACGTGGAATCCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000126KJC3_000126Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000126-T1KJC3_000126-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000126-T1.utr5p1KJC3_000126-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000126-T1.utr5p2KJC3_000126-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000126-T1.exon1KJC3_000126-T1.exon1Aspergillus niger KJC3exon
KJC3_000126-T1.exon2KJC3_000126-T1.exon2Aspergillus niger KJC3exon
KJC3_000126-T1.exon3KJC3_000126-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000126-T1.cdsKJC3_000126-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000126-T1.utr3p1KJC3_000126-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF13181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC16FsupercontigJC16F:177121..178162 +
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