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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC17F:40837..44232+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000132-T1 ID=KJC3_000132-T1|Name=KJC3_000132-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3396bp|location=Sequence derived from alignment at JC17F:40837..44232+ (Aspergillus niger KJC3)
ATCCAGTTCCAGCTCAGCTAAACCCCGCCCAAGGGGCGGCACAGTCATCT
CGTTACGTATTTCTTTCATTCACAATCCGCCTACTTCGAGTGCGTATCTA
CGCAAACAGCTACTCTCCATATGTCAACGCGAGAAAAAACTGCCATGAAG
AAGATTTCTGAAGCTTTTCAACTCTTCGGAGGTGGACGAAGAAAGGATCT
GGACTCTAGCTCAAGGGTTGACCCTCCGAACTTATCACAGTCGTCTGCCC
AAGCCTCGTTCCCCCTCGGATTCCCTGCCGGCGTCGAAGTTCTGCATGAC
TGTCCCAACGCTACGGTCGATATATGTTTCGTCCATGGCTTGTCGGGTGA
CCGAACCACTACTTGGACTGCTCAGGACCAGTCTGATCCATGGCCCAAAA
CGCTTCTTCCGTCTAAGCTCACCACCGCTCGTATATTCACTTACGGCTAT
GATGCCTATGTGGTGCGGCGGTCGGTTGCTGGATCCAATCGCTTAATCGA
CCATGCCACAGATCTCTTGAACGACTTGACAACGGATCGAGTTAATCATA
ATGCAACGTCTCGCCCAATCATTTTCGTCGCTCACAGTCTAGGCGGATTA
ATCTGCAAGAAAGCTATTCTGAGCTCCCGGAACAACCCTGAAGTCCATCT
ACAGAATATCTTCAAATACACTAAAGGCGTCATCTTCATGGGCACTCCAC
ACAAGGGATCGTGGATGGCAAAGTGGGCCAAAATTCCAGCTGAGCCTCTT
GGACTGGTGAAGTCTATGAACAAGTATTTGCTTGATATCTTGCAGACGGA
TAATCAGTTTCTCCAATCTATCCAAACCGACTTCTTGTCAATGATTCGAG
AACTCCAAGGCAACAGCAGACGCCTAGAAATCACGTGCTTTTATGAAGAG
TTGTCCATGCCTGGAATCGGCAAAGTTGTTTCGAGAGATTCGGCCACTTT
TGAGGGCTATAATCCGATGAGCATCCACGCCGATCATTGTAATATGGTTC
GTTTTAGCTCTGCAAATGATAATGGGTTTAAAAGGCTGCTTGGAGAGTTA
GTTCGATGGGAGAAAGAGGAGAGAGAGGTCAGGTCTCTGCTAGAGCATAC
TGATGGACTTGCCAGTTGCACTTCCACCCGTGGTATTTCTTGCCCCAATC
TTCGAGATCTGTCACCTACTAACCCTTTAAGAACGACAGGCTAAGCGCGG
TCGTGACAGCTTAGACGAAACTGTATCAAAACGCCGCCACACAGCCTGGA
AAAATGATTCCCAGGAAAGGGATTATTCCGATGACACTGACTATGATGGA
AGCAGCATCTTTGGTGGTATAGATTACGCCGAGGAGCATACCGCTGTGCA
ACCCAGTCAAGTAACTTGCAGCGGAGATGGCTCAGAGAGTGAGGACCCAG
AAGAAGACACCAGTGACGAATACTTTCGAAGTTCTGAAGATAACGAGGCA
CATGATGAAAATCTTACAGACGAATTTGCGCCGTTTTCTCAAAACACGGT
TCACTCGGACGAAGATAGCGGTGATGAGACGGACTGGTAACTGATCATAG
GCGCGAAACTACATTGCATATTGATTGTTAAATAGTCCAGTTGATTTTAG
ACACGGAAATGTGCGTACTGTTTATTGTATACGTCCATCACTGCGTATAG
TACAATAGCGCGGAATCTAAAATCTCATCAACTTGAAATTACATAGCACA
TGTTCCAGAGTAACGAAATGACTATTTCCCAGATCGCTCAGGTGGTCCCT
TGTTCAACGAGAACACACCAAAACGAATCTACACCAAGGCCTTGGCGGTG
GGGCCGGGAAATGATCAAGATATGTTTGTTGGTCAATCCATCCATCCGTC
CAGCCTGTACAATGGGGACGTGTCGTCCAATGCAATCTTTTTGTGTGGAT
ATTTGAGGCATAGCTTCTCTCTGAATTTTTATTGGAGGAACAGCCTCCAA
TAAAATCCAAGGCAACAACCAGATCTTGTTCCGTATATCACAGTCTTTGT
GTTGAGAGTAACCTTCCATTCAATTCAATAGTGAATACAGGTGGGTGGGT
CCTCATCATACGTCTTCCCTTCATCCCAGCCTCCGTACTGGAGGAGCGGA
AGTTTATCTGTGGGGGAGGCGCGTGGTTGAGGGGCGAAATACTCCAAGGG
GGACGGAGAGTTGGCGTTGATAAGGCTAAAACTTGGCGGCGAAGAGGTAC
GACTGAAATTTCCGGGAGTGGGTGCATACTATGGCGACTCATCGCATCGC
CACGATTCGTTTCGGTAAGCGTCGTCATCGTTTCCAGGGCTAAACAAGCT
CGAGCTCATCTCTCTAGTGATTGAGACTCCTGTGGTTAGCAATATCGGGT
CAAAACTCGCACACTACGCTGCCTCAGCAGCTGTTGTTCATTGGCGAACA
ACGGTTAGCAAACAACAGCTGCGGACGAAGAGGATTGTGAAACGACTGTC
TTTTTGTCACATCAAACAATAGAGAATATACTGTGCGTTTATCGGCTGCA
TGAGTTACAACAAGGCAGGAATACGTGGTTGCCAGAGAGGGGAAGTTGAT
GCCACATGGCCCGTCTGAGGCGTTCCTGGCTCCTTGAGATCTACGGTGCC
GGGACGGGAGGTTCCATGTTCTTCCATGGGTATCTCCCGTGCTTAACTAT
TGTCGTGGTGGGATTGTGCAAATTAAGCCATTAGCATACGGGCATAATTC
ATTTCCGTCTTATCAGTATTTCATGTATGGTAGTGTACAAGTTTTCCGGC
CACCCTTATTTGCAAGCGGGTGGCTCTCTATAAACCCCCCATCAATCTCT
TGGCAATGGGGCGCGAAAATAATTGTTTTGTGTTTCAAGGTCAATGGAAT
TCCGAGACCGACTGTACTAGACCGCACCATCGCTGCGTGGTATCGCCGGC
ATTTATGCTTCCAATTCGTACTTGGACCGCAGCGATGTGGTATCGCCAAC
ATATCTTGCCAGATCGGCCTGCGGAGACCCTATGGTGGCTCGAGAGGACG
GAGGCGCGTGTCGGTTGGCCTAGAGAGGGAGAGTATTATGCCTGATTCGT
ACTCAGGTCCCCAGGAGCGTCCTGGCGCGGTATCGCCCATAATACTATTG
CCCGTGCGGCTGGCTTAAGGTGCAAACTCCAGAGATGTTCACCGCAGCAG
AACCTTATGGGCCGGGGTTCTGCCAATGGGGACGGGTAAAATCACTGTCT
GAGCAGAAATGCCAGGCGGAAGATGGTAGTGGAATCGACCGGACCTGTTA
AGGCTTTGCCACAGGTGACCGCGAGCCGCCCTACCCCTGTTGTTTCTGGC
GCCAAGGGCCTTGAGGCAGTGATGGAGCTTCGACGACTTCGAGGTTTGTC
CCCATCAACAGCGCGGCAGCTATTCACATCGACAGTGGCTCCCGTA back to topCoding sequence (CDS) from alignment at JC17F:40837..44232+ >KJC3_000132-T1 ID=KJC3_000132-T1|Name=KJC3_000132-T1|organism=Aspergillus niger KJC3|type=CDS|length=2742bp|location=Sequence derived from alignment at JC17F:40837..44232+ (Aspergillus niger KJC3)
ATGTCAACGCGAGAAAAAACTGCCATGAAGAAGATTTCTGAAGCTTTTCA
ACTCTTCGGAGGTGGACGAAGAAAGGATCTGGACTCTAGCTCAAGGGTTG
ACCCTCCGAACTTATCACAGTCGTCTGCCCAAGCCTCGTTCCCCCTCGGA
TTCCCTGCCGGCGTCGAAGTTCTGCATGACTGTCCCAACGCTACGGTCGA
TATATGTTTCGTCCATGGCTTGTCGGGTGACCGAACCACTACTTGGACTG
CTCAGGACCAGTCTGATCCATGGCCCAAAACGCTTCTTCCGTCTAAGCTC
ACCACCGCTCGTATATTCACTTACGGCTATGATGCCTATGTGGTGCGGCG
GTCGGTTGCTGGATCCAATCGCTTAATCGACCATGCCACAGATCTCTTGA
ACGACTTGACAACGGATCGAGTTAATCATAATGCAACGTCTCGCCCAATC
ATTTTCGTCGCTCACAGTCTAGGCGGATTAATCTGCAAGAAAGCTATTCT
GAGCTCCCGGAACAACCCTGAAGTCCATCTACAGAATATCTTCAAATACA
CTAAAGGCGTCATCTTCATGGGCACTCCACACAAGGGATCGTGGATGGCA
AAGTGGGCCAAAATTCCAGCTGAGCCTCTTGGACTGGTGAAGTCTATGAA
CAAGTATTTGCTTGATATCTTGCAGACGGATAATCAGTTTCTCCAATCTA
TCCAAACCGACTTCTTGTCAATGATTCGAGAACTCCAAGGCAACAGCAGA
CGCCTAGAAATCACGTGCTTTTATGAAGAGTTGTCCATGCCTGGAATCGG
CAAAGTTGTTTCGAGAGATTCGGCCACTTTTGAGGGCTATAATCCGATGA
GCATCCACGCCGATCATTGTAATATGGTTCGTTTTAGCTCTGCAAATGAT
AATGGGTTTAAAAGGCTGCTTGGAGAGTTAGTTCGATGGGAGAAAGAGGA
GAGAGAGGTCAGGTCTCTGCTAGAGCATACTGATGGACTTGCCAGTTGCA
CTTCCACCCGTGAACGACAGGCTAAGCGCGGTCGTGACAGCTTAGACGAA
ACTGTATCAAAACGCCGCCACACAGCCTGGAAAAATGATTCCCAGGAAAG
GGATTATTCCGATGACACTGACTATGATGGAAGCAGCATCTTTGGTGGTA
TAGATTACGCCGAGGAGCATACCGCTGTGCAACCCAGTCAAGTAACTTGC
AGCGGAGATGGCTCAGAGAGTGAGGACCCAGAAGAAGACACCAGTGACGA
ATACTTTCGAAGTTCTGAAGATAACGAGGCACATGATGAAAATCTTACAG
ACGAATTTGCGCCGTTTTCTCAAAACACGGTTCACTCGGACGAAGATAGC
GGTGATGAGACGGACTGGTAAATGTCAACGCGAGAAAAAACTGCCATGAA
GAAGATTTCTGAAGCTTTTCAACTCTTCGGAGGTGGACGAAGAAAGGATC
TGGACTCTAGCTCAAGGGTTGACCCTCCGAACTTATCACAGTCGTCTGCC
CAAGCCTCGTTCCCCCTCGGATTCCCTGCCGGCGTCGAAGTTCTGCATGA
CTGTCCCAACGCTACGGTCGATATATGTTTCGTCCATGGCTTGTCGGGTG
ACCGAACCACTACTTGGACTGCTCAGGACCAGTCTGATCCATGGCCCAAA
ACGCTTCTTCCGTCTAAGCTCACCACCGCTCGTATATTCACTTACGGCTA
TGATGCCTATGTGGTGCGGCGGTCGGTTGCTGGATCCAATCGCTTAATCG
ACCATGCCACAGATCTCTTGAACGACTTGACAACGGATCGAGTTAATCAT
AATGCAACGTCTCGCCCAATCATTTTCGTCGCTCACAGTCTAGGCGGATT
AATCTGCAAGAAAGCTATTCTGAGCTCCCGGAACAACCCTGAAGTCCATC
TACAGAATATCTTCAAATACACTAAAGGCGTCATCTTCATGGGCACTCCA
CACAAGGGATCGTGGATGGCAAAGTGGGCCAAAATTCCAGCTGAGCCTCT
TGGACTGGTGAAGTCTATGAACAAGTATTTGCTTGATATCTTGCAGACGG
ATAATCAGTTTCTCCAATCTATCCAAACCGACTTCTTGTCAATGATTCGA
GAACTCCAAGGCAACAGCAGACGCCTAGAAATCACGTGCTTTTATGAAGA
GTTGTCCATGCCTGGAATCGGCAAAGTTGTTTCGAGAGATTCGGCCACTT
TTGAGGGCTATAATCCGATGAGCATCCACGCCGATCATTGTAATATGGTT
CGTTTTAGCTCTGCAAATGATAATGGGTTTAAAAGGCTGCTTGGAGAGTT
AGTTCGATGGGAGAAAGAGGAGAGAGAGGTCAGGTCTCTGCTAGAGCATA
CTGATGGACTTGCCAGTTGCACTTCCACCCGTGAACGACAGGCTAAGCGC
GGTCGTGACAGCTTAGACGAAACTGTATCAAAACGCCGCCACACAGCCTG
GAAAAATGATTCCCAGGAAAGGGATTATTCCGATGACACTGACTATGATG
GAAGCAGCATCTTTGGTGGTATAGATTACGCCGAGGAGCATACCGCTGTG
CAACCCAGTCAAGTAACTTGCAGCGGAGATGGCTCAGAGAGTGAGGACCC
AGAAGAAGACACCAGTGACGAATACTTTCGAAGTTCTGAAGATAACGAGG
CACATGATGAAAATCTTACAGACGAATTTGCGCCGTTTTCTCAAAACACG
GTTCACTCGGACGAAGATAGCGGTGATGAGACGGACTGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000132-T1.utr5p1 | KJC3_000132-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007751 |
| DBxref | InterPro:IPR029058 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC17F | supercontig | JC17F:40837..44232 + |
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