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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC18F:41214..46345- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000136-T1 ID=KJC3_000136-T1|Name=KJC3_000136-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5132bp|location=Sequence derived from alignment at JC18F:41214..46345- (Aspergillus niger KJC3)
AGGATATCGGCTCTCGCCGCGAGTTTCGAAATTCTTCAATGTAAGCTTGA
AAATGGAACTCATCGATTTACCCCCAGAAATTCTCTTCCTCATTCTGGAC
TGTATCGAATCTGCTGCAGCCTTGAAAGATATTTGCATATTATCTAAGAA
ATTTTGCGCCATCGCACAGCCGCTCCTTTACCGCAACATCATCTTCGGCC
CTGAAGATGTACCGGTATCAATCCTTCTTCTGTGTCGCACTGTCGTTACT
TGCCCTCTTATAGCGGCGCAGGTCCGACAACTCGATATTGATACCGACGA
CCCAGGATCTCTAATGACGGAGCGACATAGTAAATTTGGTGCTATCGGCC
GACAAGGGCTGCCAGCAGCAGATATTCACCTCCTCGAAAGGGAAGCCGAG
AGTATCAACCCGGGTGGCACGAATCTATCTGAGTCTGGTACATGGATCGC
AGACTCCGTCGTCTTTTCCATGTTGATCATCTCACGCACTCCAAATCTGA
GGACCTTGGCTATTACACTTGACCCGCAAGGTCTATCACTCCTGATCGGC
TTAGCCCAAGGACGAATAAATGCGCATCATTTATTATCTTGCCGAGCAAG
TTTTGAAAAACTGCACCTGCGCTGTCGGAAAGGTCGCTGCGACGAGAGAA
TAAACATGATTAGTATCGCCCGGCTCCTCTCTCTATTGCCTCTGACAGAG
ATACTGATCAGCGACTACTGTGCCCATAGGCAAGCTTCAAACACAAAAAT
TGATACAGACGTTGCTCCTCTCAGATTACTACCTATCTCAACCGTTTCGC
TCAGTGGCAGTTTCATCGAGGTGACGGATATTGATGCGCTCATCGGGTTA
TGCAGAAAGCTGGCCGCCTTCTACTATTGCCAGTACGGTTCTCAGAGTAT
TGAACCGCTAAGTCCTCAACGACTATACTCCCTGCTCTTTTGCCAACGAA
ATAGCTTACGGGTTCTCCAAGTATCATTGTATGATCTGATTGGCAGTTCT
CCAATTTTCAGTGACCTCCAATTCGGCTCACTGAAAGATTTCGTTGGCTT
GGAGTACCTTATACTAGACCAAGTGTATTTCAACTGTACACCTCAACTTC
CACCTTCTCTAAAGCATCTCACAATACGGGAATGCCGGTCCCCAGTAGCG
CCATCATTGGTTTCTATAGCGGAATGTGTGCTAAACGGCCAACTACCGAA
TTTGCAAATTATCTGCCTTCACAGCGATGGCATATTTCCGGGCAAGATGC
TCAATTTACCGCAGAGGGGTGCGACTGATATCTTATTTAACGAGGCGTGT
CGGAAGTTACTGGATATTTTCGATGGAACAGGAATAACGCTGCGTTTCGA
AAACGACTTGCTCGATAAGACTGTCCAAGGGTACGGCGCTGCGTATGAAT
ACGGTCAGCCCGGCCTATATTGGCCATTCATCTACCTTGAATAAGCGAGG
AAAAGCATTATGTGTGCTGGCCCTATCTGAGACCCAGCAGCAGCAGGGCC
TTGTCATCGGTACTGTCGCGCAGTATCCTCACGAATTGGTGCAGCAAATC
ACGGTTTTCTTCCATTTTGTTAAGCTTGCGCTTGTGGGGTAGCTTCCGTC
GTGTATCCTCGTCTAGGTCGAAGACACATTGTCTGATTCTTGATACACCG
GCCACACACCGTGGTTCCGTTTCCGACGGAACACTATGCCGATTTCAACA
TCACTAGGGAATGTGAAGGGAGGGGGGGAATCAAAACAAATACCTTGCAT
CTTATGGGCTTGCACTCACGACATGCGGTTGAGGCCTTTTGTCTGGGTGG
TATAGATGGCACAGAAACAAGGCCGTTGGATCTGTTAAAACCATCAGCAG
CCATCGGGTGCGGTGAAGCCGGTGCGGGAAATTCACGGATTATGTAGAGC
CTCCAGGAGGATTGCTATGTTGTGTGAGATACTGGGAAAAATAGAACTTA
GGCTTTCCTTCTGAGGGAACGATCCTCTGAGCTCTAGCTGAAAGGATCTT
TAGTGGGATCCGAGATATACGAGCCATCTCCGGCCAGATCGTGGGTCACA
TATTCGGGCACGAAGTACCCACATATCCTAGTTGTGCTTGGCGGTAACGA
GCTAATGCCCTTTATACGGGTAGGAACGCCTTCAATGTCCGTTTGAGTGT
TTGACAGATTCGATTTTCCATGGCGCTGACTTCCGTCATTTCAGCGCGCC
CAATAAACAAGAAAGAACAAGAAAGAATCACCAGATCAAATTTGTGGATT
GCATCGAGAACGTAAGTTGCTCAGTGTAAGTTGATGATCGTCATGATCTT
CTATCCGACTACGAATCAGTCAACTAGGTAGATAGACTGTATGACGTTCT
CCGAATATATCCTTGCATGTCTTGATAATGCGACCAAGTCTGGCTAGTAT
CCATTTATAGAAGAAGATCTTCGTCGAGGCAGTATCCACTCCTTAAGACA
CCCTTGCTGTTGACGCGGACGCTGACACCGTTCTCGCGGTTCAATCTCGA
GTCCCAAAGCTCTCGGAAATGGACTGGGAGTCTCTGCAATCACAAATGAT
GGACACCCAGACGTTGTTTCCATCAATCGACAATCCCAAGAAATGGGAGG
CTTTATGGGAGCACTGAAGCAGATCGATACCCTTATTCCCACACTGGGTA
CGATCTCCCAGGACTTCCGTTTCTTAGGTGTTGCGAGTAAGGTGGTGAAG
GCTCTTCTCCTCCCATAGGAGGACCTGGACCCGAAGAAATTGACCAAGAA
GGTCACTATTGACGGTAAACTTGATGCACAGCATCGTAACGATGCGACCG
TATCTTTGAGAGAGACGAGACTGCAAGTACGGCGGGAATGGCGTGGTCTC
TGGGGTTTCAGCTTCCATACAGGCTTGACACGACAGGAGTTGCACGCCGT
CAGCTGCTTAAGAAGAAGTACATATGTAGCTCATATCCTGTGAAGAATTG
CTCGACATTGGTAGACTGAAAGGCATTGTGGCGCCACTTCTTCTAGCTGG
CCGACCAGCAAGGATTCGAGTTCCCGGCCATAGCCGAGTCTGTGCCAGGA
CGAAGGTCCCTGCTCACCCCAATCTCCGGAGGGCCTTGGCAGCACAGAAC
AGGACGAAACAGCGAATCGGCGTTGCGGTATCTTGTACGTTGATACGGTC
GAGGCGGATGGCTTCGCTATGGAAGGAGACAGACTGTGGCAACCCTGGGA
GGCTCCACAGGTTACGGCCGTGTTCTTCCGACGGTCGCAGTTCCAGACCG
CCTTCCGCGACCTTTGGGGTGGAAGCGAAATCCAATCAGGGGACGAACGC
CGCGGACGAATCTGTAGCGACCGAGGGAGCCGTGGCAGTAGATTAGGAAA
TGCCGGATCGCGATTTGAATGTCGAATGCCCTCACCGAGTCTCGCAGCTG
TGTGAAAGAAGCAGATCGATCGGTGTATGGAAATGCTGGACTGCGGGATT
GGAATGCTTGGAATGCCCGCGGGCGATCCGGACGTGCTTGCCACCATCCA
AAATCATAAATCAAGGAGACTTTCGCTGCCAAATGATGATTCTTCCATCA
GCGACCTTTCCAATGGTTTGAAGATGCGTTAAGTTTAGCCTCAACACCAC
ATATCGACGCAATGTAATAGAGGAGGAAAATCACATATGGCATCTGAGCA
ACCAAAGCCACACTATTTTGATTAGCTTGACCGAAGAGAATGTGCACGAT
CATACGACAACCCACGGAAATAGACCCAGGAGGAAGAAGGGGCTGTCTAA
GACCATAAGTGACATAGCTGTATGGGTGGACGAGCAGATTTTCAGACTAT
CCACTCATGCTCTCCCTTACACTTGGAATGTACGAGAAGACGAAGAGTGT
TGAATGGGCTAGGGAAGCGAATTGTCCCATCTAGAGAGAAGAATGCTTGA
ATGCAATATATCATTCTGTTTTGGCCATCGGGCAAATTCAAGGAGCTCAC
ATGAAGGAGGTGGTTCTTCGATATTGACCAATATAGACTTATCCTCAATC
CAGTGGGCTTAAATAAGAAGATAATCTCGCCAGGTGACCTTTAAGACAGA
CCGGTTCACGACCAGCATATCGTTCTTTGGCAAGTTTCCGAATACGCTCT
TGTTCCCGCTCTGCACGGTCTACCTGGGATGCCAGTGCAGGTGGGTACTG
GGGTGTAGCTAAGCGCCCTTGGAGTCTATTGATCTAGTCCTGTGATTGCC
GTATCAGATCATTCGTTGTTTAAGGACTCAAAATAGACTCTTCGGTACTG
TCCGGGGGATTAGGGAATTCTCTACTTCGAACATGCGGTATTGGTACCAT
TGGGTATATAGCAGGGCACAAGCCTCTGAGGCTCCCAAGCGGTCTAGGCG
AGGAATATCCGGAAGCTGAGGTCTTTCGCACGGCAATTGGTCGGTGACGA
CATCCCGACATTGACTGACATAATACGAAGTCGGCCTCACTTTGCACGAT
GTAACAAGCCACCCCCTCCCGCTGTTAACCCACGCTGACCCGCGAGTATG
CAAACTGACAGGGGGCTCTCTGCACCACTACGTGTAGTCGCGTACCCGAC
AGCGCCGTGAATAAGAACGCTGGCAAGGCAGCGAAACTGGATACCTTGGA
AATTAGCCATCCTATCGGGATTATGGGGGTAATTGTGCAAAGCGAATTGT
CAGTGAGAGGCCAGCCGGTCTTTTAAACGCTGTCGTTTGTCCGAACCGCT
CGTCGCATCATGGGTGGGATGATATCCGTCCCCAATAGCTTCAAGTCGGA
TGTTCCTGCTGGAGGGTCAGCTCGGAATGTCCTACTATCAGGTTCAGGGT
CGCTTTCGTTCAAGGTAATCTGTAGGTATGTCGACCATGTCCGCCTCGAT
AGGTGCTAGCATCCGGTCTGTTGAGGTGAGTATGCGGAATTTTTATTGTT
TTGTTTCATTCATTTGCTAGTCGTCTACTTCGAGGATAATCTGGGTTGGA
CGACCGATTTAAGAGGATCTCATTATTGCAATGGCCCTTGTCCGATCATG
AAATCCATGTGGTATACGGTCCTGTCAGATATTGTTACAGCGAGCATCAG
ACATCTGCGATAAGGCGCGAAGGACGCAATACTGAGAGGTAACCATACGT
CTTGTCAATGAAGCTTTCCCCTCCAGTCTTGG back to topCoding sequence (CDS) from alignment at JC18F:41214..46345- >KJC3_000136-T1 ID=KJC3_000136-T1|Name=KJC3_000136-T1|organism=Aspergillus niger KJC3|type=CDS|length=1131bp|location=Sequence derived from alignment at JC18F:41214..46345- (Aspergillus niger KJC3)
ATGACGGAGCGACATAGTAAATTTGGTGCTATCGGCCGACAAGGGCTGCC
AGCAGCAGATATTCACCTCCTCGAAAGGGAAGCCGAGAGTATCAACCCGG
GTGGCACGAATCTATCTGAGTCTGGTACATGGATCGCAGACTCCGTCGTC
TTTTCCATGTTGATCATCTCACGCACTCCAAATCTGAGGACCTTGGCTAT
TACACTTGACCCGCAAGGTCTATCACTCCTGATCGGCTTAGCCCAAGGAC
GAATAAATGCGCATCATTTATTATCTTGCCGAGCAAGTTTTGAAAAACTG
CACCTGCGCTGTCGGAAAGGTCGCTGCGACGAGAGAATAAACATGATTAG
TATCGCCCGGCTCCTCTCTCTATTGCCTCTGACAGAGATACTGATCAGCG
ACTACTGTGCCCATAGGCAAGCTTCAAACACAAAAATTGATACAGACGTT
GCTCCTCTCAGATTACTACCTATCTCAACCGTTTCGCTCAGTGGCAGTTT
CATCGAGGTGACGGATATTGATGCGCTCATCGGGTTATGCAGAAAGCTGG
CCGCCTTCTACTATTGCCAGTACGGTTCTCAGAGTATTGAACCGCTAAGT
CCTCAACGACTATACTCCCTGCTCTTTTGCCAACGAAATAGCTTACGGGT
TCTCCAAGTATCATTGTATGATCTGATTGGCAGTTCTCCAATTTTCAGTG
ACCTCCAATTCGGCTCACTGAAAGATTTCGTTGGCTTGGAGTACCTTATA
CTAGACCAAGTGTATTTCAACTGTACACCTCAACTTCCACCTTCTCTAAA
GCATCTCACAATACGGGAATGCCGGTCCCCAGTAGCGCCATCATTGGTTT
CTATAGCGGAATGTGTGCTAAACGGCCAACTACCGAATTTGCAAATTATC
TGCCTTCACAGCGATGGCATATTTCCGGGCAAGATGCTCAATTTACCGCA
GAGGGGTGCGACTGATATCTTATTTAACGAGGCGTGTCGGAAGTTACTGG
ATATTTTCGATGGAACAGGAATAACGCTGCGTTTCGAAAACGACTTGCTC
GATAAGACTGTCCAAGGGTACGGCGCTGCGTATGAATACGGTCAGCCCGG
CCTATATTGGCCATTCATCTACCTTGAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC18F | supercontig | JC18F:41214..46345 - |
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