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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:29522..30573+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000146-T1 ID=KJC3_000146-T1|Name=KJC3_000146-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1052bp|location=Sequence derived from alignment at ch1:29522..30573+ (Aspergillus niger KJC3)
ATGAGGGATAGTCATATAGCACAGTCATAATCCTAAGGTTGGCGCTTTTG
TACTGTAAGGGAAGGCGTGAGTATTGAGTTTGCCTACGGATTTGTCAGCG
ATACCGCCAAGTGGCTTAAAGAGCGGAGAGGAGGTGGCGGGATGACGATT
ATGAAATGTCCGATTACTAACAAATTCCGAATCGCTCAGATATATTTTGT
ACACAATCAGCTGGCCCCCTAAGTACATCAACAAGAGTACAATCGGCTAT
CATTTGAAGGGTACGTTGAAGGAGGGTATCTACACCACGGATGGTATCTA
CGTCAATCGCACTGTTCGGTCCCCGTCGTGGTCCCCCGATGGCAAGAACA
TAGTGTATGAAAAGACCGAGTGGAACATCCGACGCTTCGAGAAGAAACTG
TACAGCTGGCTACTGGACTTGGAGACGAGATTCGTCGACGTCTTCCCACA
GTTCAACTACGCTCAGAACCGGTACGTCATGACCGAGAAGCAGCTGGGCA
ACTCGTCTGTGGTCTCTTTGAACCCCGATGGATCAGACGAGAAACTCGTC
TACAACAACATGGAGAGCGGTCTTATACCATCCTTCCTGGTTTCCTCGGG
TGTAGCCGGGGCCTTCCAGCCTGCATGGTCTCCAGATGGTGAATGGGTCG
TCTTCGGCGAGGGTGCCTGGTTCCAATGGGCGGCTGGATCATTCGCGCGA
CAGCCAACGGTTCTTACTATGAGATTCTGGCCAATAGCTCTGTCAGTATC
ACCAACACGTGACGAGGCTAGTGAGTAAGACGAATTGAAATGACTCTCCA
AGGCCAGCTTTTCTCAATAATGCTGCCATTCTTTGTGCTACAGTAATAGC
CTGGCGACAGAGCGGGGTTCCGTGCCTAATCACTCATGAATAACCAACTT
TCGTCCTTGGACAATCCGAGATCTTTGTGCACCTTAGCTGTCTTATGTAC
CAGAAAGCCAGGCCATAAGCAGACAAGATAGACCAGCGATGTCAACTTTG
AGATTAGAGATTTTTTACGTGGCAGCTACCATGTCATTTGCCAGTACGTC
AA back to topCoding sequence (CDS) from alignment at ch1:29522..30573+ >KJC3_000146-T1 ID=KJC3_000146-T1|Name=KJC3_000146-T1|organism=Aspergillus niger KJC3|type=CDS|length=1224bp|location=Sequence derived from alignment at ch1:29522..30573+ (Aspergillus niger KJC3)
ATGAGGGATAGTCATATAGCACAATATATTTTGTACACAATCAGCTGGCC
CCCTAAGTACATCAACAAGAGTACAATCGGCTATCATTTGAAGGGTACGT
TGAAGGAGGGTATCTACACCACGGATGGTATCTACGTCAATCGCACTGTT
CGGTCCCCGTCGTGGTCCCCCGATGGCAAGAACATAGTGTATGAAAAGAC
CGAGTGGAACATCCGACGCTTCGAGAAGAAACTGTACAGCTGGCTACTGG
ACTTGGAGACGAGATTCGTCGACGTCTTCCCACAGTTCAACTACGCTCAG
AACCGGTACGTCATGACCGAGAAGCAGCTGGGCAACTCGTCTGTGGTCTC
TTTGAACCCCGATGGATCAGACGAGAAACTCGTCTACAACAACATGGAGA
GCGGTCTTATACCATCCTTCCTGGTTTCCTCGGGTGTAGCCGGGGCCTTC
CAGCCTGCATGGTCTCCAGATGGTGAATGGGTCGTCTTCGGCGAGGGTGC
CTGGTTCCAATGGGCGGCTGGATCATTCGCGCGACAGCCAACGGTTCTTA
CTATGAGATTCTGGCCAATAGCTCTGTCAGTATCACCAACACGTGACGAG
GCTAGTGAGTAAATGAGGGATAGTCATATAGCACAATATATTTTGTACAC
AATCAGCTGGCCCCCTAAGTACATCAACAAGAGTACAATCGGCTATCATT
TGAAGGGTACGTTGAAGGAGGGTATCTACACCACGGATGGTATCTACGTC
AATCGCACTGTTCGGTCCCCGTCGTGGTCCCCCGATGGCAAGAACATAGT
GTATGAAAAGACCGAGTGGAACATCCGACGCTTCGAGAAGAAACTGTACA
GCTGGCTACTGGACTTGGAGACGAGATTCGTCGACGTCTTCCCACAGTTC
AACTACGCTCAGAACCGGTACGTCATGACCGAGAAGCAGCTGGGCAACTC
GTCTGTGGTCTCTTTGAACCCCGATGGATCAGACGAGAAACTCGTCTACA
ACAACATGGAGAGCGGTCTTATACCATCCTTCCTGGTTTCCTCGGGTGTA
GCCGGGGCCTTCCAGCCTGCATGGTCTCCAGATGGTGAATGGGTCGTCTT
CGGCGAGGGTGCCTGGTTCCAATGGGCGGCTGGATCATTCGCGCGACAGC
CAACGGTTCTTACTATGAGATTCTGGCCAATAGCTCTGTCAGTATCACCA
ACACGTGACGAGGCTAGTGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000146-T1.utr3p1 | KJC3_000146-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR011659 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:29522..30573 + |
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