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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:39280..39932+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000147-T1 ID=KJC3_000147-T1|Name=KJC3_000147-T1|organism=Aspergillus niger KJC3|type=mRNA|length=653bp|location=Sequence derived from alignment at ch1:39280..39932+ (Aspergillus niger KJC3)
ATGGACCCCTATTTGGACTTCTGGAATCTTATGGCCTACGATTATGCAGG
GGGTACATTTTCGGAATACACTGGGCATCAGGCAAATATATTCGAGAGCA
GCTCTAACCTGCAATCCACGCCGTTCAATACCGAAGAGGCTGTCGAGAAT
TACCTTAGCCGCGGCGTCATAGCAAGCAAAATTGTACTGGGTATGCCTCT
TTATGGTCGGGCATTCACAGATACAATCGGCCCTGGTAAACCCTTTTCCG
GCATAGGGGAAGGCAGCTGGCAGGATGGCGTCTGGGACTACAAGGCTCTG
CCGCGGCCAGGAGCCGAAGAATACACAGACGACAGTATAATAGCAAGCTA
CAGCTACGACTCAGAGCGGACATTTATCAGCTACGATAGTCCCTTGGTTG
CAAAGTGGAAAGCGGAATACATTAGGCTTAAAGGGCTTGGAGGTGGCATG
TGGTGGGAGAGTAGTGCGGATAAGCCAGGAAATGATAGTCTGATAACAAC
AGTATGCTCTACATTCTCTCTATTTTACGTGGCTAACAGATACGCAAGGT
CGTTGAGGCACTCGGGGGCGTTGGCGCATTGGAACAAAAACAGAATCAGC
TGGACTACCCTCTTTCTCAGTACGACAATATACGGGATAGGATGCAAGAA
TAA back to topCoding sequence (CDS) from alignment at ch1:39280..39932+ >KJC3_000147-T1 ID=KJC3_000147-T1|Name=KJC3_000147-T1|organism=Aspergillus niger KJC3|type=CDS|length=1212bp|location=Sequence derived from alignment at ch1:39280..39932+ (Aspergillus niger KJC3)
ATGGACCCCTATTTGGACTTCTGGAATCTTATGGCCTACGATTATGCAGG
GGGTACATTTTCGGAATACACTGGGCATCAGGCAAATATATTCGAGAGCA
GCTCTAACCTGCAATCCACGCCGTTCAATACCGAAGAGGCTGTCGAGAAT
TACCTTAGCCGCGGCGTCATAGCAAGCAAAATTGTACTGGGTATGCCTCT
TTATGGTCGGGCATTCACAGATACAATCGGCCCTGGTAAACCCTTTTCCG
GCATAGGGGAAGGCAGCTGGCAGGATGGCGTCTGGGACTACAAGGCTCTG
CCGCGGCCAGGAGCCGAAGAATACACAGACGACAGTATAATAGCAAGCTA
CAGCTACGACTCAGAGCGGACATTTATCAGCTACGATAGTCCCTTGGTTG
CAAAGTGGAAAGCGGAATACATTAGGCTTAAAGGGCTTGGAGGTGGCATG
TGGTGGGAGAGTAGTGCGGATAAGCCAGGAAATGATAGTCTGATAACAAC
AGTCGTTGAGGCACTCGGGGGCGTTGGCGCATTGGAACAAAAACAGAATC
AGCTGGACTACCCTCTTTCTCAGTACGACAATATACGGGATAGGATGCAA
GAATAAATGGACCCCTATTTGGACTTCTGGAATCTTATGGCCTACGATTA
TGCAGGGGGTACATTTTCGGAATACACTGGGCATCAGGCAAATATATTCG
AGAGCAGCTCTAACCTGCAATCCACGCCGTTCAATACCGAAGAGGCTGTC
GAGAATTACCTTAGCCGCGGCGTCATAGCAAGCAAAATTGTACTGGGTAT
GCCTCTTTATGGTCGGGCATTCACAGATACAATCGGCCCTGGTAAACCCT
TTTCCGGCATAGGGGAAGGCAGCTGGCAGGATGGCGTCTGGGACTACAAG
GCTCTGCCGCGGCCAGGAGCCGAAGAATACACAGACGACAGTATAATAGC
AAGCTACAGCTACGACTCAGAGCGGACATTTATCAGCTACGATAGTCCCT
TGGTTGCAAAGTGGAAAGCGGAATACATTAGGCTTAAAGGGCTTGGAGGT
GGCATGTGGTGGGAGAGTAGTGCGGATAAGCCAGGAAATGATAGTCTGAT
AACAACAGTCGTTGAGGCACTCGGGGGCGTTGGCGCATTGGAACAAAAAC
AGAATCAGCTGGACTACCCTCTTTCTCAGTACGACAATATACGGGATAGG
ATGCAAGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH18 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR029070 |
| DBxref | InterPro:IPR001223 |
| DBxref | InterPro:IPR011583 |
| Product | Endochitinase B1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:39280..39932 + |
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