You are here

Home

KJC3_000148-T1, KJC3_000148-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000148-T1
Unique NameKJC3_000148-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:42206..42848-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000148-T1 ID=KJC3_000148-T1|Name=KJC3_000148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=643bp|location=Sequence derived from alignment at ch1:42206..42848- (Aspergillus niger KJC3)
GCACCACACAACCGATATGATAGAAGTCTTCCCCGGAGGGCATCGGTAAG
TAACAAGGGTCGGTGACGGCAGAGCTAATGAGCACACGCCTTCAGGATGC
TGCGCCAACTTGTTCTATCGAGTACGGATCGGCCCGTGCAAATGAAACAA
TCGCCAATATTGCCCATCTCATGGACATTGCCGATTCTACGTGCAGTGTA
GGCGCAGCTACTTGTGCGCGTGTGTCCCATGAAGGGAGCTCGTCAATTTT
CTGGTGCAACTTTGTATGTGGTGAAGACCAGCAAGCGTCAACTCCAGATC
ATTGATGTGAGCCTACAGGAAAGCCAGGATATTTACATGAGGTGTGGAGA
TCTTGTTGAACCCGCCCAGCAGGTCTCCAATGCTTGCCGTGTTGGCGACC
GCTATACCTACGGCTATATCTCCAGGAGCATAGTTGATGGGTCCCAAAGC
TACCCGTATTTAGTGGCTATTGGTAGCGATTATGCATTTGAACCCTAGCC
AAAGCCGAAGACCTAATGGTTAGGTACTGGGGTCGAATATTCGCGGACAC
GAAGTTCCTGAATGAAGTAGGTGTACGTGAAATCAGGGAAGGGTAATTGT
CAAGTTAGATTGTCTCGCCCATGTCTGCAGAACTTGCTTGGAG
back to top

Coding sequence (CDS) from alignment at ch1:42206..42848-

>KJC3_000148-T1 ID=KJC3_000148-T1|Name=KJC3_000148-T1|organism=Aspergillus niger KJC3|type=CDS|length=546bp|location=Sequence derived from alignment at ch1:42206..42848- (Aspergillus niger KJC3)
GAAAGCCAGGATATTTACATGAGGTGTGGAGATCTTGTTGAACCCGCCCA
GCAGGTCTCCAATGCTTGCCGTGTTGGCGACCGCTATACCTACGGCTATA
TCTCCAGGAGCATAGTTGATGGGTCCCAAAGCTACCCGTATTTAGTGGCT
ATTGGTAGCGATTATGCATTTGAACCCTAGATGGACATTGCCGATTCTAC
GTGCAGTGTAGGCGCAGCTACTTGTGCGCGTGTGTCCCATGAAGGGAGCT
CGTCAATTTTCTGGTGCAACTTTGAAAGCCAGGATATTTACATGAGGTGT
GGAGATCTTGTTGAACCCGCCCAGCAGGTCTCCAATGCTTGCCGTGTTGG
CGACCGCTATACCTACGGCTATATCTCCAGGAGCATAGTTGATGGGTCCC
AAAGCTACCCGTATTTAGTGGCTATTGGTAGCGATTATGCATTTGAACCC
TAGATGGACATTGCCGATTCTACGTGCAGTGTAGGCGCAGCTACTTGTGC
GCGTGTGTCCCATGAAGGGAGCTCGTCAATTTTCTGGTGCAACTTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000148KJC3_000148Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000148-T1KJC3_000148-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000148-T1.cdsKJC3_000148-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000148-T1.utr3p1KJC3_000148-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000148-T1.exon3KJC3_000148-T1.exon3Aspergillus niger KJC3exon
KJC3_000148-T1.exon2KJC3_000148-T1.exon2Aspergillus niger KJC3exon
KJC3_000148-T1.exon1KJC3_000148-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000148-T1.utr5p2KJC3_000148-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000148-T1.utr5p1KJC3_000148-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:42206..42848 -
Powered by Drupal