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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:100117..100953- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000164-T1 ID=KJC3_000164-T1|Name=KJC3_000164-T1|organism=Aspergillus niger KJC3|type=mRNA|length=837bp|location=Sequence derived from alignment at ch1:100117..100953- (Aspergillus niger KJC3)
CTTGCCAGCAAACAATTTTCCGACTTATACATATCGAGAGTCATATGTTA
CAGAACCGACACGATGCCATTTACTGGATACCTTGGCTTCCTGAAGCAAA
GCTGTCATGATAGCAAAGAGAAGAGACCTAAATCAGACGATGAAATGGAC
GCGACTATCCTCGTCAGTGACATGAGGCTGCCAGTATCGAGCAAGGTCTT
GATATCTGAGAGTTTGCGTTTTCGCGAATGGCTTCAAAGCAATCCAGGCG
AAACAGAAGTGCAGCTCCAGTACGTTAACGTTCACTGCGTCTGGCGCACA
TTGCAATTGATGTCTCGTGGAGAGTATACGACCGATCCATGTCCAAAAAC
ACAGCTGCCAGGTACGGATATTAGACAGCACCCGGAGGACTACAGCATTG
ACTAATCAAACCTGAAGACGAGGACGGTCAGCTCACCCAGCATGCATCCG
TGTATCAGCTAGCAGAGTATTGGGGTCTGTCAGACTATCTCCAAAATCTC
GCCTTTGAAAACTACAAGAATATAGTTGAAAGAGGCCACTGGAAAACCGA
AGATTTCCTCACCTCTATCAACACAATCCTACATCCTATCTTACCAGGCC
ACTTCTCTGATGTTCACGAAATAGAAAAACTGAAGGAAAGCAGAATGGTT
ATTTTCATGTTGCATCATCTGCACAGGTACCGTGGCAGGTTCGAGGATGG
TTTGCTGGTGTTTTGTCTCCAATCATCGCGGGTCTTCCTAGAATTGTTCT
TGAACACTTGGTCAAAGTATCCGGGCAAGGGGGAAAGGTCAGTACAGTAA
AGTCAACTGGCATTCCTGGAGAGGGGGCGGAATGGTC back to topCoding sequence (CDS) from alignment at ch1:100117..100953- >KJC3_000164-T1 ID=KJC3_000164-T1|Name=KJC3_000164-T1|organism=Aspergillus niger KJC3|type=CDS|length=1362bp|location=Sequence derived from alignment at ch1:100117..100953- (Aspergillus niger KJC3)
ACGAGGACGGTCAGCTCACCCAGCATGCATCCGTGTATCAGCTAGCAGAG
TATTGGGGTCTGTCAGACTATCTCCAAAATCTCGCCTTTGAAAACTACAA
GAATATAGTTGAAAGAGGCCACTGGAAAACCGAAGATTTCCTCACCTCTA
TCAACACAATCCTACATCCTATCTTACCAGGCCACTTCTCTGATGTTCAC
GAAATAGAAAAACTGAAGGAAAGCAGAATGGTTATTTTCATGTTGCATCA
TCTGCACAGGTACCGTGGCAGGTTCGAGGATGGTTTGCTGGTGTTTTGTC
TCCAATCATCGCGGGTCTTCCTAGAATTGTTCTTGAACACTTGGTCAAAG
TATCCGGGCAAGGGGGAAAGGTCAGTACAGTAAATGCCATTTACTGGATA
CCTTGGCTTCCTGAAGCAAAGCTGTCATGATAGCAAAGAGAAGAGACCTA
AATCAGACGATGAAATGGACGCGACTATCCTCGTCAGTGACATGAGGCTG
CCAGTATCGAGCAAGGTCTTGATATCTGAGAGTTTGCGTTTTCGCGAATG
GCTTCAAAGCAATCCAGGCGAAACAGAAGTGCAGCTCCAGTACGTTAACG
TTCACTGCGTCTGGCGCACATTGCAATTGATGTCTCGTGGAGAGTATACG
ACCGATCCATGTCCAAAAACACAGCTGCCAGACGAGGACGGTCAGCTCAC
CCAGCATGCATCCGTGTATCAGCTAGCAGAGTATTGGGGTCTGTCAGACT
ATCTCCAAAATCTCGCCTTTGAAAACTACAAGAATATAGTTGAAAGAGGC
CACTGGAAAACCGAAGATTTCCTCACCTCTATCAACACAATCCTACATCC
TATCTTACCAGGCCACTTCTCTGATGTTCACGAAATAGAAAAACTGAAGG
AAAGCAGAATGGTTATTTTCATGTTGCATCATCTGCACAGGTACCGTGGC
AGGTTCGAGGATGGTTTGCTGGTGTTTTGTCTCCAATCATCGCGGGTCTT
CCTAGAATTGTTCTTGAACACTTGGTCAAAGTATCCGGGCAAGGGGGAAA
GGTCAGTACAGTAAATGCCATTTACTGGATACCTTGGCTTCCTGAAGCAA
AGCTGTCATGATAGCAAAGAGAAGAGACCTAAATCAGACGATGAAATGGA
CGCGACTATCCTCGTCAGTGACATGAGGCTGCCAGTATCGAGCAAGGTCT
TGATATCTGAGAGTTTGCGTTTTCGCGAATGGCTTCAAAGCAATCCAGGC
GAAACAGAAGTGCAGCTCCAGTACGTTAACGTTCACTGCGTCTGGCGCAC
ATTGCAATTGATGTCTCGTGGAGAGTATACGACCGATCCATGTCCAAAAA
CACAGCTGCCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000164-T1.utr3p1 | KJC3_000164-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000164-T1.utr5p1 | KJC3_000164-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011333 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:100117..100953 - |
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