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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:188155..190058+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000185-T1 ID=KJC3_000185-T1|Name=KJC3_000185-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1904bp|location=Sequence derived from alignment at ch1:188155..190058+ (Aspergillus niger KJC3)
CCGGCACAAGGTTCATGTATATAAGGGTAGAAAGTACATTGCCAATATAC
ACCTCTTTTATGCTTGACTGCACTTATTGGTCTCAAACCTAACCTTTCTA
CAGCAATGGAGACAACTAGCGTCGAAACAGTGGGTGCGGCAGATGACTTT
CGCCAATTTATCAAGGAGCTGGAAGATGAAAATGACCTGATTGTCATTAC
CAAAGAGGTTGACCCCCATCTGGAACTTGCGGCTATTACACGCAAAGTCT
ACGAGACCGAGGAGAAGGCCCCCCTGTTTGAGAATATTAGAGGTCGTCAG
GGTAGCGGCCTTTTTCGTATTCTAGGAGCTCCCATCGGATTGAGTCGCAT
TCCTGGCCATCGATTCGGCCGTATCGCGAAATCGCTGGGGCTACATTCTA
CTGCGACTGGCGAAGAAATTATCGACAAGATCAAGAAGTGCAAAAGCATG
TTGCCTTTATCTCCTGTCGAAGTTACGCCTGATAAAGCACCCGTTAAACA
GTACAAACTCTTTGGTGACGACATCGACCTGAACGCTCTGCCAGTCCCCT
TCCATCACGACGGAGATGGTGGGAAGTACCTGCAAACTTTTGGTATGCAT
ATTGTGAGAACCCCCGATGGGTGCTGGACCAATTGGTCAATCACTCGGGG
GATGGTTCATGATAAACGTTCACTTGTTGGACCTGTTATTCTAAAACAGG
ACATTGGTGTAATATGGCAGATGTGGAAAGAGAGAGGGCAGGACATGCCA
TGGGCTCTTTGCTTTGGAGTCCCTCCGGCTGCCATAATGGCAGGTGGCAT
GCCAATTCCCAAGTGGACGGATGAAGCTGGATTCGTAGGTGTGTTGTCTG
GAAAGCCCGTGAAAGTAGTGAAGTGCGAGACAAACGACCTCTACGTCCCC
ATGAATGCAGAATTTGTCCTAGAAGGTAAGATTCATTTTAAAGATTCGAG
CCCATATAGGATCCTGCTAATTTGAATATTGCAAGAAAGGTGTGGTATCT
ACTACCGAAGTTGGCCCTGAAGGCCCAATGGCGGAGTATCATGGTATGAT
CTTCCCAGGAGAGGCAAAGAACAAATCTCTCTTCAAGGTGAATGCAATTA
CCTACAGACATGATCCGATCTTGCCACTCTGTGTGGCAGGAAGAGCTACG
GAAGAAAATCACACTGTATGGGGCATCATGCAGGCTGCTGAGGTTTTGAA
CGTGTGTCAAGCCGCAGGACTGCCAATCAAGATGGTTTGGTGTCCCTTTG
AGTCCCATTGTCTGTGGTTTGTCCTCCAGGTTGACCGGCAGAGGTTGAGA
GCCTTGAACACAAACATCCAAGACTTCAGCAAACAGGTGGGCCATACTGT
CTTTGGATCAAAGCCTGGCTGGTATATCCCGAAACTATATCTGGTTGGCG
AGGACATCGACCCGACAGATCTCCGAGATGTAATCTGGGCAGAATCTACT
CGCTGCCAGCCTTTGACAAATGAATTCTTTTTTGAGGAATACGGAAATAT
TCCCTTGATTCCGTACGTCGGGTATGGCATCAAGCCGGAGCATGGCAATC
ACCCGAAGGTTGTACGCTGCTGCATGTTTCCTTGCGAGTTTGTGGATGAG
AAACTATGCTGGAAAGAAGGATCTTTCCGCGGATCTTACCCCTCTCATAT
TCAGAACAAGGTCACGCGTAAATGGAAGGCATATGGATTTGATAGTGAGT
GAATAGTCTTATTGGCTATCGACAGGGAATCTACGCAGAGGCTCTGTGCT
GCTCAGGGATAAAATTCCTAAAAAATGGAAGGGGGTATCGGGTCGACAAA
TTTGATCTTTGTCCTGCCATGTTAAATTTATTAGCGACCAGTGGATAGAT
AGACTTTGGTTAAAGTGACTTTCCATGAGCTGCAGGATACTGTACACAGC
GAGA back to topCoding sequence (CDS) from alignment at ch1:188155..190058+ >KJC3_000185-T1 ID=KJC3_000185-T1|Name=KJC3_000185-T1|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch1:188155..190058+ (Aspergillus niger KJC3)
ATGTATATAAGGGTAGAAACAATGGAGACAACTAGCGTCGAAACAGTGGG
TGCGGCAGATGACTTTCGCCAATTTATCAAGGAGCTGGAAGATGAAAATG
ACCTGATTGTCATTACCAAAGAGGTTGACCCCCATCTGGAACTTGCGGCT
ATTACACGCAAAGTCTACGAGACCGAGGAGAAGGCCCCCCTGTTTGAGAA
TATTAGAGGTCGTCAGGGTAGCGGCCTTTTTCGTATTCTAGGAGCTCCCA
TCGGATTGAGTCGCATTCCTGGCCATCGATTCGGCCGTATCGCGAAATCG
CTGGGGCTACATTCTACTGCGACTGGCGAAGAAATTATCGACAAGATCAA
GAAGTGCAAAAGCATGTTGCCTTTATCTCCTGTCGAAGTTACGCCTGATA
AAGCACCCGTTAAACAGTACAAACTCTTTGGTGACGACATCGACCTGAAC
GCTCTGCCAGTCCCCTTCCATCACGACGGAGATGGTGGGAAGTACCTGCA
AACTTTTGGTATGCATATTGTGAGAACCCCCGATGGGTGCTGGACCAATT
GGTCAATCACTCGGGGGATGGTTCATGATAAACGTTCACTTGTTGGACCT
GTTATTCTAAAACAGGACATTGGTGTAATATGGCAGATGTGGAAAGAGAG
AGGGCAGGACATGCCATGGGCTCTTTGCTTTGGAGTCCCTCCGGCTGCCA
TAATGGCAGGTGGCATGCCAATTCCCAAGTGGACGGATGAAGCTGGATTC
GTAGGTGTGTTGTCTGGAAAGCCCGTGAAAGTAGTGAAGTGCGAGACAAA
CGACCTCTACGTCCCCATGAATGCAGAATTTGTCCTAGAAGGTGTGGTAT
CTACTACCGAAGTTGGCCCTGAAGGCCCAATGGCGGAGTATCATGGTATG
ATCTTCCCAGGAGAGGCAAAGAACAAATCTCTCTTCAAGGTGAATGCAAT
TACCTACAGACATGATCCGATCTTGCCACTCTGTGTGGCAGGAAGAGCTA
CGGAAGAAAATCACACTGTATGGGGCATCATGCAGGCTGCTGAGGTTTTG
AACGTGTGTCAAGCCGCAGGACTGCCAATCAAGATGGTTTGGTGTCCCTT
TGAGTCCCATTGTCTGTGGTTTGTCCTCCAGGTTGACCGGCAGAGGTTGA
GAGCCTTGAACACAAACATCCAAGACTTCAGCAAACAGGTGGGCCATACT
GTCTTTGGATCAAAGCCTGGCTGGTATATCCCGAAACTATATCTGGTTGG
CGAGGACATCGACCCGACAGATCTCCGAGATGTAATCTGGGCAGAATCTA
CTCGCTGCCAGCCTTTGACAAATGAATTCTTTTTTGAGGAATACGGAAAT
ATTCCCTTGATTCCGTACGTCGGGTATGGCATCAAGCCGGAGCATGGCAA
TCACCCGAAGGTTGTACGCTGCTGCATGTTTCCTTGCGAGTTTGTGGATG
AGAAACTATGCTGGAAAGAAGGATCTTTCCGCGGATCTTACCCCTCTCAT
ATTCAGAACAAGGTCACGCGTAAATGGAAGGCATATGGATTTGATAGTGA
GTGAATGTATATAAGGGTAGAAACAATGGAGACAACTAGCGTCGAAACAG
TGGGTGCGGCAGATGACTTTCGCCAATTTATCAAGGAGCTGGAAGATGAA
AATGACCTGATTGTCATTACCAAAGAGGTTGACCCCCATCTGGAACTTGC
GGCTATTACACGCAAAGTCTACGAGACCGAGGAGAAGGCCCCCCTGTTTG
AGAATATTAGAGGTCGTCAGGGTAGCGGCCTTTTTCGTATTCTAGGAGCT
CCCATCGGATTGAGTCGCATTCCTGGCCATCGATTCGGCCGTATCGCGAA
ATCGCTGGGGCTACATTCTACTGCGACTGGCGAAGAAATTATCGACAAGA
TCAAGAAGTGCAAAAGCATGTTGCCTTTATCTCCTGTCGAAGTTACGCCT
GATAAAGCACCCGTTAAACAGTACAAACTCTTTGGTGACGACATCGACCT
GAACGCTCTGCCAGTCCCCTTCCATCACGACGGAGATGGTGGGAAGTACC
TGCAAACTTTTGGTATGCATATTGTGAGAACCCCCGATGGGTGCTGGACC
AATTGGTCAATCACTCGGGGGATGGTTCATGATAAACGTTCACTTGTTGG
ACCTGTTATTCTAAAACAGGACATTGGTGTAATATGGCAGATGTGGAAAG
AGAGAGGGCAGGACATGCCATGGGCTCTTTGCTTTGGAGTCCCTCCGGCT
GCCATAATGGCAGGTGGCATGCCAATTCCCAAGTGGACGGATGAAGCTGG
ATTCGTAGGTGTGTTGTCTGGAAAGCCCGTGAAAGTAGTGAAGTGCGAGA
CAAACGACCTCTACGTCCCCATGAATGCAGAATTTGTCCTAGAAGGTGTG
GTATCTACTACCGAAGTTGGCCCTGAAGGCCCAATGGCGGAGTATCATGG
TATGATCTTCCCAGGAGAGGCAAAGAACAAATCTCTCTTCAAGGTGAATG
CAATTACCTACAGACATGATCCGATCTTGCCACTCTGTGTGGCAGGAAGA
GCTACGGAAGAAAATCACACTGTATGGGGCATCATGCAGGCTGCTGAGGT
TTTGAACGTGTGTCAAGCCGCAGGACTGCCAATCAAGATGGTTTGGTGTC
CCTTTGAGTCCCATTGTCTGTGGTTTGTCCTCCAGGTTGACCGGCAGAGG
TTGAGAGCCTTGAACACAAACATCCAAGACTTCAGCAAACAGGTGGGCCA
TACTGTCTTTGGATCAAAGCCTGGCTGGTATATCCCGAAACTATATCTGG
TTGGCGAGGACATCGACCCGACAGATCTCCGAGATGTAATCTGGGCAGAA
TCTACTCGCTGCCAGCCTTTGACAAATGAATTCTTTTTTGAGGAATACGG
AAATATTCCCTTGATTCCGTACGTCGGGTATGGCATCAAGCCGGAGCATG
GCAATCACCCGAAGGTTGTACGCTGCTGCATGTTTCCTTGCGAGTTTGTG
GATGAGAAACTATGCTGGAAAGAAGGATCTTTCCGCGGATCTTACCCCTC
TCATATTCAGAACAAGGTCACGCGTAAATGGAAGGCATATGGATTTGATA
GTGAGTGAATGTATATAAGGGTAGAAACAATGGAGACAACTAGCGTCGAA
ACAGTGGGTGCGGCAGATGACTTTCGCCAATTTATCAAGGAGCTGGAAGA
TGAAAATGACCTGATTGTCATTACCAAAGAGGTTGACCCCCATCTGGAAC
TTGCGGCTATTACACGCAAAGTCTACGAGACCGAGGAGAAGGCCCCCCTG
TTTGAGAATATTAGAGGTCGTCAGGGTAGCGGCCTTTTTCGTATTCTAGG
AGCTCCCATCGGATTGAGTCGCATTCCTGGCCATCGATTCGGCCGTATCG
CGAAATCGCTGGGGCTACATTCTACTGCGACTGGCGAAGAAATTATCGAC
AAGATCAAGAAGTGCAAAAGCATGTTGCCTTTATCTCCTGTCGAAGTTAC
GCCTGATAAAGCACCCGTTAAACAGTACAAACTCTTTGGTGACGACATCG
ACCTGAACGCTCTGCCAGTCCCCTTCCATCACGACGGAGATGGTGGGAAG
TACCTGCAAACTTTTGGTATGCATATTGTGAGAACCCCCGATGGGTGCTG
GACCAATTGGTCAATCACTCGGGGGATGGTTCATGATAAACGTTCACTTG
TTGGACCTGTTATTCTAAAACAGGACATTGGTGTAATATGGCAGATGTGG
AAAGAGAGAGGGCAGGACATGCCATGGGCTCTTTGCTTTGGAGTCCCTCC
GGCTGCCATAATGGCAGGTGGCATGCCAATTCCCAAGTGGACGGATGAAG
CTGGATTCGTAGGTGTGTTGTCTGGAAAGCCCGTGAAAGTAGTGAAGTGC
GAGACAAACGACCTCTACGTCCCCATGAATGCAGAATTTGTCCTAGAAGG
TGTGGTATCTACTACCGAAGTTGGCCCTGAAGGCCCAATGGCGGAGTATC
ATGGTATGATCTTCCCAGGAGAGGCAAAGAACAAATCTCTCTTCAAGGTG
AATGCAATTACCTACAGACATGATCCGATCTTGCCACTCTGTGTGGCAGG
AAGAGCTACGGAAGAAAATCACACTGTATGGGGCATCATGCAGGCTGCTG
AGGTTTTGAACGTGTGTCAAGCCGCAGGACTGCCAATCAAGATGGTTTGG
TGTCCCTTTGAGTCCCATTGTCTGTGGTTTGTCCTCCAGGTTGACCGGCA
GAGGTTGAGAGCCTTGAACACAAACATCCAAGACTTCAGCAAACAGGTGG
GCCATACTGTCTTTGGATCAAAGCCTGGCTGGTATATCCCGAAACTATAT
CTGGTTGGCGAGGACATCGACCCGACAGATCTCCGAGATGTAATCTGGGC
AGAATCTACTCGCTGCCAGCCTTTGACAAATGAATTCTTTTTTGAGGAAT
ACGGAAATATTCCCTTGATTCCGTACGTCGGGTATGGCATCAAGCCGGAG
CATGGCAATCACCCGAAGGTTGTACGCTGCTGCATGTTTCCTTGCGAGTT
TGTGGATGAGAAACTATGCTGGAAAGAAGGATCTTTCCGCGGATCTTACC
CCTCTCATATTCAGAACAAGGTCACGCGTAAATGGAAGGCATATGGATTT
GATAGTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016831 | carboxy-lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000185-T1.utr5p1 | KJC3_000185-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000185-T1.utr3p1 | KJC3_000185-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032903 |
| DBxref | InterPro:IPR002830 |
| DBxref | PFAM:PF01977 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:188155..190058 + |
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