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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:211968..214211- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000193-T1 ID=KJC3_000193-T1|Name=KJC3_000193-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2244bp|location=Sequence derived from alignment at ch1:211968..214211- (Aspergillus niger KJC3)
CTCATACAGTCAAACATCCTAGTTTCTTCATTCAAAGGCGACCCGCAATT
CATCTTACCACTTTCTTTGGCACACAATTAGTGCCATTTGCCTTACACAA
TTATATCCCACTCCACCTCCCACTCCCCCAAAGAGAAACACCATGTATAT
TCAGCTTGACCTCTCTTCATACTACGGAGCCTACTAGCTAATACGGATTT
TGATGCTCAGGCTATGCACACCGTCAGAAAAATACGATGCTTCCCCCCGG
CCGTACGTCAACAGCAGGAAATGGCCTACTCAAACTTTGACTCAAGCTCC
CCGATGGCTTTCAACCGACCTGAGGGATGGCAATCAGGCATTAGTCCAGG
TACCTCTGACTCCGCATGTACAGCTATCTCAACCTGCTAATCAAACCAGC
CCATGAATGGTGATCTCAAGCTACGCTATTTCCAAACCCTCATTAAGCTG
GGATACAAGGAGATTGAAGTCTCTTATCCCTCTGCCTCACAGACCGAGTT
CGATTTCACGCGATACCTCATAAGTACCCCTGGTATTGTGCCCGATGACA
CGTGGATCCAAGTCATGGCGCCTTGTCGCGACGAACTCATTCAAAGAACG
ATTGAGGCCGTCCGGGGTGCGAGGAAAGTCGTTCTGCACATACATCTCTC
TACATCCGATCTTTTCCGCGAAATCGTCTATCTAATGACAAAGAAAGAGA
TGATAGACCTTGCTGTTCGGTGCATGAGGATGATTCGCGAACTCACGAAA
GACTCCCTAGATGCCGAGATGCGGAAAACTGAATGGACGATGGAATTTAC
CTTGGAAAACTTTCAAGATACATCCGTTGAATTTGCACTTGAAATCTGCG
AAGCTGTGAAAGCAGCCTGGGAGCCGACCACTGAGAATAAAATCATTTTC
AATCTTCCTTCAACTGTCGAGATATCTATGCCGAACGTCTTCGCAGACCA
GATCGAGCTCTTCTGTAGGGGTATCTCCGAGCGAGAAAAGGTTTGTGTAT
CAGTTCATCCTCACAATGACCGGGGATGTGGCGTGGCGGCAGCCGAGATG
GCTCAGCTGGCTGGTGCAGATCGAGTTGAAGGATGTCTATTCGGGAATGG
CGAACGCACTGGAAACGTTGATCTCGTCACGCTGGCTCTGAATTTATATA
CTCAGGGCATATCACCCAGAGTTAACCTGGGCAATTTGAATGAGGTTGTC
GCGATGGTAGAGGACTGCACTAAGATCCCCATCCATCCTAGAGCTCCCTA
TGCAGGAAAGTATGTGTTTTGCACATTTACCGGTACGCACCAGGACGCTA
TTCGAAAGGGATATAACCAGCTCCAAGAGAGTGAGAAACATGATGCTACA
CAGACCCCCAAGTGGAGAATGCCATATTTACCAATGGATCCAGCTGATCT
GGGAAGGCAACACGAAGCTATTGTGAGGGTGAACTCGCAAAGTGGGAAAA
GTGGCGTTGCCTGGCTTCTCGAGGAGAGTTTCCACATTCATATGCCCCGA
GAGTTAGAAATTGAGTTCACAAAGATCGTCAAAACATATGCGAATATGAG
TGGTTTTGAGATTACTCAGGAGACTATCCGTCGCTTGTTCCGGGAACACT
ACATGCATGCTGATTCTGAAAAAGCCAGGCTGTTGGATTGCAGAGCCGAT
GAGACCAAAGGAGATCGGGTTGTTACACAAGTGCAACTTAAAGTTGCAGT
CGAGGGGTCCGAACACGACCTTGAAGCAACTGGAAGTGAACTATTACCGA
CCATACTCGATGCCCTGAAGCCATTGGGCTATGGCTTCGAGGCATTGGAC
AGCCAAATGCAATACACAACCAACCGGGATACAATCACGAGTTTCGTTAG
GCTAGGCACATCCGAGAACTTCGCTGCATGGGGTGTCGGCATGCATAAAG
ACACGGCGTGGGCCGTGTCACTTGCCGTAAGTAAAAAGGGCATGAACAAT
TGAGCACGGCATTAACGGAATTTTAGGTTTTAGCGGCAGGCCAAAAGATG
ATGGCAGAGAAGGTCAACAGCTTCTTCTCCAACTAAAAACTGGGTATTAA
CCGTGTGATGGCAAGTAACCGATGTTGCCAGTGTGTGTTTGAGTAACCAA
ATTATTGGTGATGGGCTTAATCGTATTGACTGTTTATCCTCCCGCCCACC
TGAAAAATAGGTACAGCGTCGGATAGTACCGTGTCAGCCAACAGTGGCAT
AAATGAGAATAAATTACAGCAATGCAATTGACTCTAAGAAGGAA back to topCoding sequence (CDS) from alignment at ch1:211968..214211- >KJC3_000193-T1 ID=KJC3_000193-T1|Name=KJC3_000193-T1|organism=Aspergillus niger KJC3|type=CDS|length=6912bp|location=Sequence derived from alignment at ch1:211968..214211- (Aspergillus niger KJC3)
GTTTTAGCGGCAGGCCAAAAGATGATGGCAGAGAAGGTCAACAGCTTCTT
CTCCAACTAACCCATGAATGGTGATCTCAAGCTACGCTATTTCCAAACCC
TCATTAAGCTGGGATACAAGGAGATTGAAGTCTCTTATCCCTCTGCCTCA
CAGACCGAGTTCGATTTCACGCGATACCTCATAAGTACCCCTGGTATTGT
GCCCGATGACACGTGGATCCAAGTCATGGCGCCTTGTCGCGACGAACTCA
TTCAAAGAACGATTGAGGCCGTCCGGGGTGCGAGGAAAGTCGTTCTGCAC
ATACATCTCTCTACATCCGATCTTTTCCGCGAAATCGTCTATCTAATGAC
AAAGAAAGAGATGATAGACCTTGCTGTTCGGTGCATGAGGATGATTCGCG
AACTCACGAAAGACTCCCTAGATGCCGAGATGCGGAAAACTGAATGGACG
ATGGAATTTACCTTGGAAAACTTTCAAGATACATCCGTTGAATTTGCACT
TGAAATCTGCGAAGCTGTGAAAGCAGCCTGGGAGCCGACCACTGAGAATA
AAATCATTTTCAATCTTCCTTCAACTGTCGAGATATCTATGCCGAACGTC
TTCGCAGACCAGATCGAGCTCTTCTGTAGGGGTATCTCCGAGCGAGAAAA
GGTTTGTGTATCAGTTCATCCTCACAATGACCGGGGATGTGGCGTGGCGG
CAGCCGAGATGGCTCAGCTGGCTGGTGCAGATCGAGTTGAAGGATGTCTA
TTCGGGAATGGCGAACGCACTGGAAACGTTGATCTCGTCACGCTGGCTCT
GAATTTATATACTCAGGGCATATCACCCAGAGTTAACCTGGGCAATTTGA
ATGAGGTTGTCGCGATGGTAGAGGACTGCACTAAGATCCCCATCCATCCT
AGAGCTCCCTATGCAGGAAAGTATGTGTTTTGCACATTTACCGGTACGCA
CCAGGACGCTATTCGAAAGGGATATAACCAGCTCCAAGAGAGTGAGAAAC
ATGATGCTACACAGACCCCCAAGTGGAGAATGCCATATTTACCAATGGAT
CCAGCTGATCTGGGAAGGCAACACGAAGCTATTGTGAGGGTGAACTCGCA
AAGTGGGAAAAGTGGCGTTGCCTGGCTTCTCGAGGAGAGTTTCCACATTC
ATATGCCCCGAGAGTTAGAAATTGAGTTCACAAAGATCGTCAAAACATAT
GCGAATATGAGTGGTTTTGAGATTACTCAGGAGACTATCCGTCGCTTGTT
CCGGGAACACTACATGCATGCTGATTCTGAAAAAGCCAGGCTGTTGGATT
GCAGAGCCGATGAGACCAAAGGAGATCGGGTTGTTACACAAGTGCAACTT
AAAGTTGCAGTCGAGGGGTCCGAACACGACCTTGAAGCAACTGGAAGTGA
ACTATTACCGACCATACTCGATGCCCTGAAGCCATTGGGCTATGGCTTCG
AGGCATTGGACAGCCAAATGCAATACACAACCAACCGGGATACAATCACG
AGTTTCGTTAGGCTAGGCACATCCGAGAACTTCGCTGCATGGGGTGTCGG
CATGCATAAAGACACGGCGTGGGCCGTGTCACTTGCCGCTATGCACACCG
TCAGAAAAATACGATGCTTCCCCCCGGCCGTACGTCAACAGCAGGAAATG
GCCTACTCAAACTTTGACTCAAGCTCCCCGATGGCTTTCAACCGACCTGA
GGGATGGCAATCAGGCATTAGTCCAGATGTTTTAGCGGCAGGCCAAAAGA
TGATGGCAGAGAAGGTCAACAGCTTCTTCTCCAACTAACCCATGAATGGT
GATCTCAAGCTACGCTATTTCCAAACCCTCATTAAGCTGGGATACAAGGA
GATTGAAGTCTCTTATCCCTCTGCCTCACAGACCGAGTTCGATTTCACGC
GATACCTCATAAGTACCCCTGGTATTGTGCCCGATGACACGTGGATCCAA
GTCATGGCGCCTTGTCGCGACGAACTCATTCAAAGAACGATTGAGGCCGT
CCGGGGTGCGAGGAAAGTCGTTCTGCACATACATCTCTCTACATCCGATC
TTTTCCGCGAAATCGTCTATCTAATGACAAAGAAAGAGATGATAGACCTT
GCTGTTCGGTGCATGAGGATGATTCGCGAACTCACGAAAGACTCCCTAGA
TGCCGAGATGCGGAAAACTGAATGGACGATGGAATTTACCTTGGAAAACT
TTCAAGATACATCCGTTGAATTTGCACTTGAAATCTGCGAAGCTGTGAAA
GCAGCCTGGGAGCCGACCACTGAGAATAAAATCATTTTCAATCTTCCTTC
AACTGTCGAGATATCTATGCCGAACGTCTTCGCAGACCAGATCGAGCTCT
TCTGTAGGGGTATCTCCGAGCGAGAAAAGGTTTGTGTATCAGTTCATCCT
CACAATGACCGGGGATGTGGCGTGGCGGCAGCCGAGATGGCTCAGCTGGC
TGGTGCAGATCGAGTTGAAGGATGTCTATTCGGGAATGGCGAACGCACTG
GAAACGTTGATCTCGTCACGCTGGCTCTGAATTTATATACTCAGGGCATA
TCACCCAGAGTTAACCTGGGCAATTTGAATGAGGTTGTCGCGATGGTAGA
GGACTGCACTAAGATCCCCATCCATCCTAGAGCTCCCTATGCAGGAAAGT
ATGTGTTTTGCACATTTACCGGTACGCACCAGGACGCTATTCGAAAGGGA
TATAACCAGCTCCAAGAGAGTGAGAAACATGATGCTACACAGACCCCCAA
GTGGAGAATGCCATATTTACCAATGGATCCAGCTGATCTGGGAAGGCAAC
ACGAAGCTATTGTGAGGGTGAACTCGCAAAGTGGGAAAAGTGGCGTTGCC
TGGCTTCTCGAGGAGAGTTTCCACATTCATATGCCCCGAGAGTTAGAAAT
TGAGTTCACAAAGATCGTCAAAACATATGCGAATATGAGTGGTTTTGAGA
TTACTCAGGAGACTATCCGTCGCTTGTTCCGGGAACACTACATGCATGCT
GATTCTGAAAAAGCCAGGCTGTTGGATTGCAGAGCCGATGAGACCAAAGG
AGATCGGGTTGTTACACAAGTGCAACTTAAAGTTGCAGTCGAGGGGTCCG
AACACGACCTTGAAGCAACTGGAAGTGAACTATTACCGACCATACTCGAT
GCCCTGAAGCCATTGGGCTATGGCTTCGAGGCATTGGACAGCCAAATGCA
ATACACAACCAACCGGGATACAATCACGAGTTTCGTTAGGCTAGGCACAT
CCGAGAACTTCGCTGCATGGGGTGTCGGCATGCATAAAGACACGGCGTGG
GCCGTGTCACTTGCCGCTATGCACACCGTCAGAAAAATACGATGCTTCCC
CCCGGCCGTACGTCAACAGCAGGAAATGGCCTACTCAAACTTTGACTCAA
GCTCCCCGATGGCTTTCAACCGACCTGAGGGATGGCAATCAGGCATTAGT
CCAGATGTTTTAGCGGCAGGCCAAAAGATGATGGCAGAGAAGGTCAACAG
CTTCTTCTCCAACTAACCCATGAATGGTGATCTCAAGCTACGCTATTTCC
AAACCCTCATTAAGCTGGGATACAAGGAGATTGAAGTCTCTTATCCCTCT
GCCTCACAGACCGAGTTCGATTTCACGCGATACCTCATAAGTACCCCTGG
TATTGTGCCCGATGACACGTGGATCCAAGTCATGGCGCCTTGTCGCGACG
AACTCATTCAAAGAACGATTGAGGCCGTCCGGGGTGCGAGGAAAGTCGTT
CTGCACATACATCTCTCTACATCCGATCTTTTCCGCGAAATCGTCTATCT
AATGACAAAGAAAGAGATGATAGACCTTGCTGTTCGGTGCATGAGGATGA
TTCGCGAACTCACGAAAGACTCCCTAGATGCCGAGATGCGGAAAACTGAA
TGGACGATGGAATTTACCTTGGAAAACTTTCAAGATACATCCGTTGAATT
TGCACTTGAAATCTGCGAAGCTGTGAAAGCAGCCTGGGAGCCGACCACTG
AGAATAAAATCATTTTCAATCTTCCTTCAACTGTCGAGATATCTATGCCG
AACGTCTTCGCAGACCAGATCGAGCTCTTCTGTAGGGGTATCTCCGAGCG
AGAAAAGGTTTGTGTATCAGTTCATCCTCACAATGACCGGGGATGTGGCG
TGGCGGCAGCCGAGATGGCTCAGCTGGCTGGTGCAGATCGAGTTGAAGGA
TGTCTATTCGGGAATGGCGAACGCACTGGAAACGTTGATCTCGTCACGCT
GGCTCTGAATTTATATACTCAGGGCATATCACCCAGAGTTAACCTGGGCA
ATTTGAATGAGGTTGTCGCGATGGTAGAGGACTGCACTAAGATCCCCATC
CATCCTAGAGCTCCCTATGCAGGAAAGTATGTGTTTTGCACATTTACCGG
TACGCACCAGGACGCTATTCGAAAGGGATATAACCAGCTCCAAGAGAGTG
AGAAACATGATGCTACACAGACCCCCAAGTGGAGAATGCCATATTTACCA
ATGGATCCAGCTGATCTGGGAAGGCAACACGAAGCTATTGTGAGGGTGAA
CTCGCAAAGTGGGAAAAGTGGCGTTGCCTGGCTTCTCGAGGAGAGTTTCC
ACATTCATATGCCCCGAGAGTTAGAAATTGAGTTCACAAAGATCGTCAAA
ACATATGCGAATATGAGTGGTTTTGAGATTACTCAGGAGACTATCCGTCG
CTTGTTCCGGGAACACTACATGCATGCTGATTCTGAAAAAGCCAGGCTGT
TGGATTGCAGAGCCGATGAGACCAAAGGAGATCGGGTTGTTACACAAGTG
CAACTTAAAGTTGCAGTCGAGGGGTCCGAACACGACCTTGAAGCAACTGG
AAGTGAACTATTACCGACCATACTCGATGCCCTGAAGCCATTGGGCTATG
GCTTCGAGGCATTGGACAGCCAAATGCAATACACAACCAACCGGGATACA
ATCACGAGTTTCGTTAGGCTAGGCACATCCGAGAACTTCGCTGCATGGGG
TGTCGGCATGCATAAAGACACGGCGTGGGCCGTGTCACTTGCCGCTATGC
ACACCGTCAGAAAAATACGATGCTTCCCCCCGGCCGTACGTCAACAGCAG
GAAATGGCCTACTCAAACTTTGACTCAAGCTCCCCGATGGCTTTCAACCG
ACCTGAGGGATGGCAATCAGGCATTAGTCCAGATGTTTTAGCGGCAGGCC
AAAAGATGATGGCAGAGAAGGTCAACAGCTTCTTCTCCAACTAACCCATG
AATGGTGATCTCAAGCTACGCTATTTCCAAACCCTCATTAAGCTGGGATA
CAAGGAGATTGAAGTCTCTTATCCCTCTGCCTCACAGACCGAGTTCGATT
TCACGCGATACCTCATAAGTACCCCTGGTATTGTGCCCGATGACACGTGG
ATCCAAGTCATGGCGCCTTGTCGCGACGAACTCATTCAAAGAACGATTGA
GGCCGTCCGGGGTGCGAGGAAAGTCGTTCTGCACATACATCTCTCTACAT
CCGATCTTTTCCGCGAAATCGTCTATCTAATGACAAAGAAAGAGATGATA
GACCTTGCTGTTCGGTGCATGAGGATGATTCGCGAACTCACGAAAGACTC
CCTAGATGCCGAGATGCGGAAAACTGAATGGACGATGGAATTTACCTTGG
AAAACTTTCAAGATACATCCGTTGAATTTGCACTTGAAATCTGCGAAGCT
GTGAAAGCAGCCTGGGAGCCGACCACTGAGAATAAAATCATTTTCAATCT
TCCTTCAACTGTCGAGATATCTATGCCGAACGTCTTCGCAGACCAGATCG
AGCTCTTCTGTAGGGGTATCTCCGAGCGAGAAAAGGTTTGTGTATCAGTT
CATCCTCACAATGACCGGGGATGTGGCGTGGCGGCAGCCGAGATGGCTCA
GCTGGCTGGTGCAGATCGAGTTGAAGGATGTCTATTCGGGAATGGCGAAC
GCACTGGAAACGTTGATCTCGTCACGCTGGCTCTGAATTTATATACTCAG
GGCATATCACCCAGAGTTAACCTGGGCAATTTGAATGAGGTTGTCGCGAT
GGTAGAGGACTGCACTAAGATCCCCATCCATCCTAGAGCTCCCTATGCAG
GAAAGTATGTGTTTTGCACATTTACCGGTACGCACCAGGACGCTATTCGA
AAGGGATATAACCAGCTCCAAGAGAGTGAGAAACATGATGCTACACAGAC
CCCCAAGTGGAGAATGCCATATTTACCAATGGATCCAGCTGATCTGGGAA
GGCAACACGAAGCTATTGTGAGGGTGAACTCGCAAAGTGGGAAAAGTGGC
GTTGCCTGGCTTCTCGAGGAGAGTTTCCACATTCATATGCCCCGAGAGTT
AGAAATTGAGTTCACAAAGATCGTCAAAACATATGCGAATATGAGTGGTT
TTGAGATTACTCAGGAGACTATCCGTCGCTTGTTCCGGGAACACTACATG
CATGCTGATTCTGAAAAAGCCAGGCTGTTGGATTGCAGAGCCGATGAGAC
CAAAGGAGATCGGGTTGTTACACAAGTGCAACTTAAAGTTGCAGTCGAGG
GGTCCGAACACGACCTTGAAGCAACTGGAAGTGAACTATTACCGACCATA
CTCGATGCCCTGAAGCCATTGGGCTATGGCTTCGAGGCATTGGACAGCCA
AATGCAATACACAACCAACCGGGATACAATCACGAGTTTCGTTAGGCTAG
GCACATCCGAGAACTTCGCTGCATGGGGTGTCGGCATGCATAAAGACACG
GCGTGGGCCGTGTCACTTGCCGCTATGCACACCGTCAGAAAAATACGATG
CTTCCCCCCGGCCGTACGTCAACAGCAGGAAATGGCCTACTCAAACTTTG
ACTCAAGCTCCCCGATGGCTTTCAACCGACCTGAGGGATGGCAATCAGGC
ATTAGTCCAGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
| GO:0009098 | leucine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer |
| GO:0003852 | 2-isopropylmalate synthase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000193-T1.utr3p1 | KJC3_000193-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000193-T1.utr5p1 | KJC3_000193-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR039371 |
| DBxref | InterPro:IPR002034 |
| DBxref | InterPro:IPR013709 |
| DBxref | InterPro:IPR036230 |
| DBxref | InterPro:IPR000891 |
| DBxref | InterPro:IPR013785 |
| DBxref | PFAM:PF08502 |
| DBxref | PFAM:PF00682 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:211968..214211 - |
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