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KJC3_000194-T2, KJC3_000194-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000194-T2
Unique NameKJC3_000194-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:214443..216447+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000194-T2 ID=KJC3_000194-T2|Name=KJC3_000194-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2005bp|location=Sequence derived from alignment at ch1:214443..216447+ (Aspergillus niger KJC3)
AATCTGCACTATCAAGGCTCTACCAGAGCACAGATGGTGGATCAGATAGA
TCCTTAATGCTGTGTTACGTATTGTCGTCGCTAGTCACGATCTCGTGCAT
TATCACACTCGGAACCGTGCCGCTTATCTTGCCCCAGATCTGATATCAAA
AGCAAATATGCGCTAGCATGGTAAGTTGAGTCAGGTTCAAATCCCGAATT
GTGATGAGAACTCCCGTGCATGCCGGTGGCCAGGCTTCCTATTCGTGGGA
AATCGTGACCTTTCAGGCAATTGGAAATCTCTCGAGCTTGAATAATATCT
CTTGTATCACCATACGCACACATGGCTAACTTATTTAGGAAGTACCATGT
CTATCAGCTATCTCAGCTGAGTCGGCAACTCCGAGGATACGCTCGAACGG
AGTATATTACCCTCTCGTGTGTTCGAAGTAAAGGGTCTCTTTCCACTGTG
ATGGGGACTAACATTATCCACACAACATGGCAGCAGATCAGAACGAGTCA
TCAACTGTTGATGCAGTCACTGAGAGGCCTGCGCCACCGTATACGATCTT
TGATAGATCTCAGAAGCGTCTGTTGGCGGTGCTTGTTTCCGCTGCTGCTA
CATGTAAGTCACTGTCTATCCACATTATAATACTGCAGACACCTCTAATA
ATTCAGTCTCGACACTGGCGTCAAACATTTATTTCCCTGCTATTCCATCC
ATATCCCGCAGTCTCAATGTCTCTACTGAGCTCGTCAACCTTTCCATTAC
CTCCTACCTTATCTTCCAGGGCCTAGCGCCTAGCCTCTGGGGTCCAATCT
CAGACGTCAAAGGTCGCCGAATAGCATACATCGGTACCCTATTTGTAGCA
GTCTGTGCCTGCATTGGTCTCGCAGAGACCAGGAATTATACTATGCTTAT
CATTTTTCGGTGCTTGCAAAGTACTGGGTCTGCTAGTACTGTTGCTATCG
GATCAGGTGTGATTGGCGATATTACGACCCGTGAAGATCGTGGGGGATTC
ATGGGTTTTTTTCAAGGAATGATGTTGGTTTCCATTGCTATTGGGCCTGT
TATCGGGGGAGCGCTTGCAGGGTCGATTGGATGGAGAACTATCTTTTGGT
TTCTCACTGTTTACAGCGGGGTACTGCTTACCATGATAGGGTTGTTGCTT
CCTGAGACGTTGAGGTCAATCGTGGGAAATGGTGGTCAACTTCCTTCCCC
AAGGATCGGGCGTTATCCCCTTGCTCTCTATCAGCGCTTCAGTAAAACGA
ATTGGCGTGAGACTGTGGAATATAACCGGCTGGCCCCCAAGAAACGAACC
GAACTTTTAGGACCCCTCCGCATCTTGATCAGCAAACAGGCCGCCCCGCT
GGTACTTTTCTTTGCCATTTACTTCGCTGTGTGGCAAATGACGATTACGG
CTATGGCAACTCTCTTCAAAGAACACTATGGATTGACAGAAATTCAGTCC
GGATTAACCTTCATCGCTAATGGTGCGGGCTCTATGTTCGGGACCCTCAT
CACAGGTAGGATCCTCGACAAGGATTATCGCCGGTTCAGAGAACAAGAAC
TTGCAGAAACATCACCCTCAAGACAGGAGAAATTATTTCCACTTGAACGA
GCCCGTCTTCGTCTGGTTCCCATCTTCGCTGGCCTACAATGTTTATCAGT
CATGATATTTGGCTGGACTGTTCAATATTCGTCCCACGTCCACATCGCCG
TTCCCATTATCTCAACGTTTATTACCGGGTGGACAGCTGTGTCCAATCAA
TCGATAGTGACGACTTATTTAGTTGATGTATTCCATGATAGTAGTGCAGC
TGCGAGCGCAAGTCTGAATATGGCCCGTTGCTGTCTTGCGGCTGCGGGCT
CGGGATTTGTGATGCCCATGGTGAATCGTGTTGGATGCGGAGTGGCTTTC
ACCGTATGTGTTGCAGCACAGATATTTGCGAATACTGGCTTGTGGATACA
GTGGAGGTATGGTGGTCTTTGGAGGAGTGAGATGGAGAAGAAGTGGAGTC
GGTGA
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Coding sequence (CDS) from alignment at ch1:214443..216447+

>KJC3_000194-T2 ID=KJC3_000194-T2|Name=KJC3_000194-T2|organism=Aspergillus niger KJC3|type=CDS|length=1113bp|location=Sequence derived from alignment at ch1:214443..216447+ (Aspergillus niger KJC3)
ATGCTTATCATTTTTCGGTGCTTGCAAAGTACTGGGTCTGCTAGTACTGT
TGCTATCGGATCAGGTGTGATTGGCGATATTACGACCCGTGAAGATCGTG
GGGGATTCATGGGTTTTTTTCAAGGAATGATGTTGGTTTCCATTGCTATT
GGGCCTGTTATCGGGGGAGCGCTTGCAGGGTCGATTGGATGGAGAACTAT
CTTTTGGTTTCTCACTGTTTACAGCGGGGTACTGCTTACCATGATAGGGT
TGTTGCTTCCTGAGACGTTGAGGTCAATCGTGGGAAATGGTGGTCAACTT
CCTTCCCCAAGGATCGGGCGTTATCCCCTTGCTCTCTATCAGCGCTTCAG
TAAAACGAATTGGCGTGAGACTGTGGAATATAACCGGCTGGCCCCCAAGA
AACGAACCGAACTTTTAGGACCCCTCCGCATCTTGATCAGCAAACAGGCC
GCCCCGCTGGTACTTTTCTTTGCCATTTACTTCGCTGTGTGGCAAATGAC
GATTACGGCTATGGCAACTCTCTTCAAAGAACACTATGGATTGACAGAAA
TTCAGTCCGGATTAACCTTCATCGCTAATGGTGCGGGCTCTATGTTCGGG
ACCCTCATCACAGGTAGGATCCTCGACAAGGATTATCGCCGGTTCAGAGA
ACAAGAACTTGCAGAAACATCACCCTCAAGACAGGAGAAATTATTTCCAC
TTGAACGAGCCCGTCTTCGTCTGGTTCCCATCTTCGCTGGCCTACAATGT
TTATCAGTCATGATATTTGGCTGGACTGTTCAATATTCGTCCCACGTCCA
CATCGCCGTTCCCATTATCTCAACGTTTATTACCGGGTGGACAGCTGTGT
CCAATCAATCGATAGTGACGACTTATTTAGTTGATGTATTCCATGATAGT
AGTGCAGCTGCGAGCGCAAGTCTGAATATGGCCCGTTGCTGTCTTGCGGC
TGCGGGCTCGGGATTTGTGATGCCCATGGTGAATCGTGTTGGATGCGGAG
TGGCTTTCACCGTATGTGTTGCAGCACAGATATTTGCGAATACTGGCTTG
TGGATACAGTGGAGGTATGGTGGTCTTTGGAGGAGTGAGATGGAGAAGAA
GTGGAGTCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000194KJC3_000194Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000194-T2KJC3_000194-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000194-T2.utr5p1KJC3_000194-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000194-T2.utr5p2KJC3_000194-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000194-T2.utr5p3KJC3_000194-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000194-T2.exon1KJC3_000194-T2.exon1Aspergillus niger KJC3exon
KJC3_000194-T2.exon2KJC3_000194-T2.exon2Aspergillus niger KJC3exon
KJC3_000194-T2.exon3KJC3_000194-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000194-T2.cdsKJC3_000194-T2.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:214443..216447 +
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