|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:219291..220304+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000196-T1 ID=KJC3_000196-T1|Name=KJC3_000196-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1014bp|location=Sequence derived from alignment at ch1:219291..220304+ (Aspergillus niger KJC3)
CTGAACTTCCGCCCGCAACCTTCGGTCTCGTGGGCATGAGAGGACTGTTA
CTCTCATCAATTTTCGCCTCCCTATCGACGCATTACACGAGTCTACCACT
ATCCAGACGCAATCAACTCAACAAAAACCATATCGGTCAAAGTTCCTTAG
CAGAGCGTTATTGTTGTAACAGCCAAAAGCTGGGGAGCTTCCCAAGCGGG
GCCAATGACCTGGCCCGAAACAGTCCGTTCCATCCTCTGTGAAGAGGCAT
GGAGTTGGAATGACGGATCAAGTCAAATTACCTTTCACGAGGATGGAACA
GGCAAGGTGAGTTCGACAACTGAGTAGCCTTCTTTTCTCGTTGATTGACG
TTTAACATATAGCTATTTTGCTCAACCGAGTACACTTGTTGGATTTTCGC
CGAAATTGAATGGAAGCCGCACGATTCCGCGTATCTCGATCGGGTCATCG
ACCTAGGTAACAATAGACAGCGGTCTAAGGTAATCAGTGACTTTACCATT
GAAATGACCCTCACAAAGCGACGACCACCCGATATCTGGTATAAAGGCAG
AGTCAATGAGACTTGGCTAGATGAAGAGGCATTTTGCTCAAGAATGTATC
ATATAACACTTGAGCACGGCCGCTTCAGGAACCAATTCGACGTCAATCAT
AAGATTTTGGATGGCTCACTATATGCCCTGCGCATAGTCTTCGATCCCTC
GCCGTTTCCGCCAGAGGAGAGGTGGAATGATGAAAGTTGCGGACCGCATG
TGATGCGACTCTGGGCGTGTACAGAATTCAACGCTAGAAGGTATCCCGAA
GAAAGACTGGGCTTATGGGGAAGATTGATGGCTTGGTGCAACGATTGGAC
CAGGTGACTCGAGATGAGGAAATGTGAGGTCATTATCTGTAGAGAAGCTT
CACTCTCTGGAGCTGCCCCGGTGCAAATTTTGACTCTCCTTGCTCAACGT
AATCGAAACTTGAACATTACATAAGTATCTAATGAAATGTGATTTCGTCA
TTTTTCCAGGTCGG back to topCoding sequence (CDS) from alignment at ch1:219291..220304+ >KJC3_000196-T1 ID=KJC3_000196-T1|Name=KJC3_000196-T1|organism=Aspergillus niger KJC3|type=CDS|length=1194bp|location=Sequence derived from alignment at ch1:219291..220304+ (Aspergillus niger KJC3)
ATGACCTGGCCCGAAACAGTCCGTTCCATCCTCTGTGAAGAGGCATGGAG
TTGGAATGACGGATCAAGTCAAATTACCTTTCACGAGGATGGAACAGGCA
AGCTATTTTGCTCAACCGAGTACACTTGTTGGATTTTCGCCGAAATTGAA
TGGAAGCCGCACGATTCCGCGTATCTCGATCGGGTCATCGACCTAGGTAA
CAATAGACAGCGGTCTAAGGTAATCAGTGACTTTACCATTGAAATGACCC
TCACAAAGCGACGACCACCCGATATCTGGTATAAAGGCAGAGTCAATGAG
ACTTGGCTAGATGAAGAGGCATTTTGCTCAAGAATGTATCATATAACACT
TGAGCACGGCCGCTTCAGGAACCAATTCGACGTCAATCATAAGATTTTGG
ATGGCTCACTATATGCCCTGCGCATAGTCTTCGATCCCTCGCCGTTTCCG
CCAGAGGAGAGGTGGAATGATGAAAGTTGCGGACCGCATGTGATGCGACT
CTGGGCGTGTACAGAATTCAACGCTAGAAGGTATCCCGAAGAAAGACTGG
GCTTATGGGGAAGATTGATGGCTTGGTGCAACGATTGGACCAGGTGAATG
ACCTGGCCCGAAACAGTCCGTTCCATCCTCTGTGAAGAGGCATGGAGTTG
GAATGACGGATCAAGTCAAATTACCTTTCACGAGGATGGAACAGGCAAGC
TATTTTGCTCAACCGAGTACACTTGTTGGATTTTCGCCGAAATTGAATGG
AAGCCGCACGATTCCGCGTATCTCGATCGGGTCATCGACCTAGGTAACAA
TAGACAGCGGTCTAAGGTAATCAGTGACTTTACCATTGAAATGACCCTCA
CAAAGCGACGACCACCCGATATCTGGTATAAAGGCAGAGTCAATGAGACT
TGGCTAGATGAAGAGGCATTTTGCTCAAGAATGTATCATATAACACTTGA
GCACGGCCGCTTCAGGAACCAATTCGACGTCAATCATAAGATTTTGGATG
GCTCACTATATGCCCTGCGCATAGTCTTCGATCCCTCGCCGTTTCCGCCA
GAGGAGAGGTGGAATGATGAAAGTTGCGGACCGCATGTGATGCGACTCTG
GGCGTGTACAGAATTCAACGCTAGAAGGTATCCCGAAGAAAGACTGGGCT
TATGGGGAAGATTGATGGCTTGGTGCAACGATTGGACCAGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000196-T1.utr5p1 | KJC3_000196-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000196-T1.utr3p1 | KJC3_000196-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:219291..220304 + |
|
