You are here

Home

KJC3_000216-T1, KJC3_000216-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000216-T1
Unique NameKJC3_000216-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:272984..273910+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000216-T1 ID=KJC3_000216-T1|Name=KJC3_000216-T1|organism=Aspergillus niger KJC3|type=mRNA|length=927bp|location=Sequence derived from alignment at ch1:272984..273910+ (Aspergillus niger KJC3)
ATGGCCACCTTCAAACCGCTCTTCCCACCCCAAATCGTCCCGCGCGACCG
TGGCGATGGCCCGACTCCCTTCCCGGAGACCACGAGCTCCATCTCCCCCA
TGGTCCGGGACAATCTCACCCTCTCCTCCTGGCTCCTGCTGGGTGGGCTG
ATGCAAGGGGGTGCGTGTCTACTGTTGGGCCCCCTCTCCCTGCTTCCGAC
CGCGGCCATCCTGCTGTACCGGTTCATCGACCATCTGTTGATGGCCTGCC
ACATAACCCCCAACCGGTACATGACCGGATCCATCCCTATCAAGCGCAGT
GCCCAGTATCCCCGGCCCGATGGCACCTTTGGCAGTGAACCGGCGGGCGA
GTCAATCGTGGTCTTCCATCTGGGGGCGCGCTGCCACCATCCACTCGGGA
TGCTCGCCCCAGGCATGAAGGAGTTGGGCGAAAGTGCTGATAAGATGAGT
CGAAACATGCGCGCCAACCCCGTCAAGTACGGTCTGCTGGGCACCTCGCA
CTGGTTGAAGACCGACAGTCCAGCGGGTAACGAGACCATGACCGTCTTCT
ACCTCCGCGATTACGCTGCTCTTCATCAATTCGCTCACGATGACATCCAC
ATGGAAGGGGTGCGCTGGTGGTCTCGCATCGCCAAAGACCATCCACACCT
GGCCATTTATCATGAAACCTACCTGGTGCCCCGCGGGCAGTGGGAGAATA
TCTACATTAACGGGTTTCCGACCGGCATCGCCGATACCTGGTTTCCCGTG
CAGGCCGCTGATGACAACAAAGAGAAAAATCCCGAAGTGGTTGAGAAATG
GGTGCGACCGTTGGTTGACGCGCGTGACGGCGTCTTGCGGTCGGCCAGCA
AGCGGCTGCAGTTGACACGCTTGGAGGGTCGCGAGAAGGAGCACGACGAT
ATGTATAACCAGCCTGACGGCCTGTGA
back to top

Coding sequence (CDS) from alignment at ch1:272984..273910+

>KJC3_000216-T1 ID=KJC3_000216-T1|Name=KJC3_000216-T1|organism=Aspergillus niger KJC3|type=CDS|length=927bp|location=Sequence derived from alignment at ch1:272984..273910+ (Aspergillus niger KJC3)
ATGGCCACCTTCAAACCGCTCTTCCCACCCCAAATCGTCCCGCGCGACCG
TGGCGATGGCCCGACTCCCTTCCCGGAGACCACGAGCTCCATCTCCCCCA
TGGTCCGGGACAATCTCACCCTCTCCTCCTGGCTCCTGCTGGGTGGGCTG
ATGCAAGGGGGTGCGTGTCTACTGTTGGGCCCCCTCTCCCTGCTTCCGAC
CGCGGCCATCCTGCTGTACCGGTTCATCGACCATCTGTTGATGGCCTGCC
ACATAACCCCCAACCGGTACATGACCGGATCCATCCCTATCAAGCGCAGT
GCCCAGTATCCCCGGCCCGATGGCACCTTTGGCAGTGAACCGGCGGGCGA
GTCAATCGTGGTCTTCCATCTGGGGGCGCGCTGCCACCATCCACTCGGGA
TGCTCGCCCCAGGCATGAAGGAGTTGGGCGAAAGTGCTGATAAGATGAGT
CGAAACATGCGCGCCAACCCCGTCAAGTACGGTCTGCTGGGCACCTCGCA
CTGGTTGAAGACCGACAGTCCAGCGGGTAACGAGACCATGACCGTCTTCT
ACCTCCGCGATTACGCTGCTCTTCATCAATTCGCTCACGATGACATCCAC
ATGGAAGGGGTGCGCTGGTGGTCTCGCATCGCCAAAGACCATCCACACCT
GGCCATTTATCATGAAACCTACCTGGTGCCCCGCGGGCAGTGGGAGAATA
TCTACATTAACGGGTTTCCGACCGGCATCGCCGATACCTGGTTTCCCGTG
CAGGCCGCTGATGACAACAAAGAGAAAAATCCCGAAGTGGTTGAGAAATG
GGTGCGACCGTTGGTTGACGCGCGTGACGGCGTCTTGCGGTCGGCCAGCA
AGCGGCTGCAGTTGACACGCTTGGAGGGTCGCGAGAAGGAGCACGACGAT
ATGTATAACCAGCCTGACGGCCTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000216KJC3_000216Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000216-T1.exon1KJC3_000216-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000216-T1.cdsKJC3_000216-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000216-T1KJC3_000216-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1.1
DBxrefInterPro:IPR025444
DBxrefPFAM:PF13826
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:272984..273910 +
Powered by Drupal