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KJC3_000220-T1, KJC3_000220-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000220-T1
Unique NameKJC3_000220-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:282816..284441+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000220-T1 ID=KJC3_000220-T1|Name=KJC3_000220-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1626bp|location=Sequence derived from alignment at ch1:282816..284441+ (Aspergillus niger KJC3)
TCGAAGTCGTCTAGAATCACCTTATTTGCCTATAAATAACACACTTTGCA
CGTCCTAACCGATTACTTTCCCAACCACATCCACTTCCATCCATCTTCTC
CAACTTCATCTCCATCTCAGACACATCAACCTTCATAATGGCTCCTCCTA
AGATTGCAATCATCGGTGGTGAGTCTATTCCTTTGCCAATGTGATAGTTC
AGGGCTGACTTTTACTAGCGGGCCCTGCCGGTCTTACTTTGGCCCGTCTG
CTGCAACACAACGGCATCCCCTGCATCGTCTACGAGGCAGAGGAGAACCG
CCATGCTCGCACACAGGGTGGTTGCTTGGACATCCACGAGGGGTCTGCAC
AGGTAGCTCTGCGCGAGTGTGGTCTTTTCGAAGAGTTCATGGCTGTTGCC
CGCACGGAGGGTGAGGTGTTGAAGATCTACCAGCCCGACGGCGCACTGCT
GCTCGACGAAGGTTCCGACTACGGCGAGAAGCGCCCAGACTCATTCAATG
GACGCCCAGAAGTCGACCGGGTGAAGCTGCGCAGCATGCTGATTGACTCT
CTCGAATGGGGCAGTCTTCGCTGGGGCCACAAACTCAAGAAGGTCACCAC
TGAAGCCACGGGCACCCGTCTGCAATACGACCTGCACTTCCAAGACCACA
CAGAGACCGGGTTCGACTTGGTGGTGGGCGCCGACGGGGCCTGGAGCAAG
GTACGCCATTTGCTTACGGACACCCGGCCCATCTTCTCGGGGATCTCTGG
CGTGGATTTCAAGTACAGCGCCATCGACGAGGCGGACCCGGCTCTGGCCC
AGCGTGTCGGCAAGGGCATGTGTCTGACCCTGGGCAGCCACACAACTGTG
CTGTCGCAGCGGAACGGTGACGGCTGCGTCCGGACCTACGGGTTCATGCG
GCTGCCGGAGGACTGGCACACGACGTGCGGCATCGACTGGACCCAGCCGC
AGCAGGCCAAGCGGGAGTTCGTCGATCGTTACTATGAAGGGTTCAACGAT
GACTCCAAGAACCTTATGCTCGACGCCGACGATGATTTGGTGCCTCGCCC
CATGTACATGCTTCCTATTGGTCACAAGTGGCAGCACCGTGCCGGGTAAG
TTTTCCGTCTGTGCTTTTATTCCTGTTCCTTATCTGACATGTTGGATCTG
AGCTAATTTTGGTCTCAGTTTGACTCTTATTGGCGATGCTGCCCACTTAA
TGACACCATTTGCGGGAGTTGGCGTGAACGTGGGGATGGAGGACGCTCTG
GAGCTGGCACGGGCCATCATCGCGCGCAAGACCAGCTGGGAAGATGGCCA
GCCTTTCGCAGGTGCGAATAGTCTCTCCGCCGCAGTGGGGCAATACGAAC
AGGCCATGTTCCCTCGTGCTGAGGGCTACGCCCGCGAGACGTGGATGTAT
CTCAACTTGTTCTTCAATGAGCGGGGTGGTCATGCCATGTGTGAGCACTT
TGCTAAAGCGAAGGAGCAGGCCAAGGTGGAGGCTGCGGTGGAGAAGAAGC
CTGAAGAGACGGAGAAGACTGCGGAGGTGAAGCAGACGGTGGTGGTGGAG
CAGGCCATTCCTGTGGAGTAAATCTGTTATTTCATGTTTGTTTCTAGAGC
TATACCCAATTTAAACTTTCTCTTCA
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Coding sequence (CDS) from alignment at ch1:282816..284441+

>KJC3_000220-T1 ID=KJC3_000220-T1|Name=KJC3_000220-T1|organism=Aspergillus niger KJC3|type=CDS|length=3933bp|location=Sequence derived from alignment at ch1:282816..284441+ (Aspergillus niger KJC3)
ATGGCTCCTCCTAAGATTGCAATCATCGGTGCGGGCCCTGCCGGTCTTAC
TTTGGCCCGTCTGCTGCAACACAACGGCATCCCCTGCATCGTCTACGAGG
CAGAGGAGAACCGCCATGCTCGCACACAGGGTGGTTGCTTGGACATCCAC
GAGGGGTCTGCACAGGTAGCTCTGCGCGAGTGTGGTCTTTTCGAAGAGTT
CATGGCTGTTGCCCGCACGGAGGGTGAGGTGTTGAAGATCTACCAGCCCG
ACGGCGCACTGCTGCTCGACGAAGGTTCCGACTACGGCGAGAAGCGCCCA
GACTCATTCAATGGACGCCCAGAAGTCGACCGGGTGAAGCTGCGCAGCAT
GCTGATTGACTCTCTCGAATGGGGCAGTCTTCGCTGGGGCCACAAACTCA
AGAAGGTCACCACTGAAGCCACGGGCACCCGTCTGCAATACGACCTGCAC
TTCCAAGACCACACAGAGACCGGGTTCGACTTGGTGGTGGGCGCCGACGG
GGCCTGGAGCAAGGTACGCCATTTGCTTACGGACACCCGGCCCATCTTCT
CGGGGATCTCTGGCGTGGATTTCAAGTACAGCGCCATCGACGAGGCGGAC
CCGGCTCTGGCCCAGCGTGTCGGCAAGGGCATGTGTCTGACCCTGGGCAG
CCACACAACTGTGCTGTCGCAGCGGAACGGTGACGGCTGCGTCCGGACCT
ACGGGTTCATGCGGCTGCCGGAGGACTGGCACACGACGTGCGGCATCGAC
TGGACCCAGCCGCAGCAGGCCAAGCGGGAGTTCGTCGATCGTTACTATGA
AGGGTTCAACGATGACTCCAAGAACCTTATGCTCGACGCCGACGATGATT
TGGTGCCTCGCCCCATGTACATGCTTCCTATTGGTCACAAGTGGCAGCAC
CGTGCCGGTTTGACTCTTATTGGCGATGCTGCCCACTTAATGACACCATT
TGCGGGAGTTGGCGTGAACGTGGGGATGGAGGACGCTCTGGAGCTGGCAC
GGGCCATCATCGCGCGCAAGACCAGCTGGGAAGATGGCCAGCCTTTCGCA
GGTGCGAATAGTCTCTCCGCCGCAGTGGGGCAATACGAACAGGCCATGTT
CCCTCGTGCTGAGGGCTACGCCCGCGAGACGTGGATGTATCTCAACTTGT
TCTTCAATGAGCGGGGTGGTCATGCCATGTGTGAGCACTTTGCTAAAGCG
AAGGAGCAGGCCAAGGTGGAGGCTGCGGTGGAGAAGAAGCCTGAAGAGAC
GGAGAAGACTGCGGAGGTGAAGCAGACGGTGGTGGTGGAGCAGGCCATTC
CTGTGGAGTAAATGGCTCCTCCTAAGATTGCAATCATCGGTGCGGGCCCT
GCCGGTCTTACTTTGGCCCGTCTGCTGCAACACAACGGCATCCCCTGCAT
CGTCTACGAGGCAGAGGAGAACCGCCATGCTCGCACACAGGGTGGTTGCT
TGGACATCCACGAGGGGTCTGCACAGGTAGCTCTGCGCGAGTGTGGTCTT
TTCGAAGAGTTCATGGCTGTTGCCCGCACGGAGGGTGAGGTGTTGAAGAT
CTACCAGCCCGACGGCGCACTGCTGCTCGACGAAGGTTCCGACTACGGCG
AGAAGCGCCCAGACTCATTCAATGGACGCCCAGAAGTCGACCGGGTGAAG
CTGCGCAGCATGCTGATTGACTCTCTCGAATGGGGCAGTCTTCGCTGGGG
CCACAAACTCAAGAAGGTCACCACTGAAGCCACGGGCACCCGTCTGCAAT
ACGACCTGCACTTCCAAGACCACACAGAGACCGGGTTCGACTTGGTGGTG
GGCGCCGACGGGGCCTGGAGCAAGGTACGCCATTTGCTTACGGACACCCG
GCCCATCTTCTCGGGGATCTCTGGCGTGGATTTCAAGTACAGCGCCATCG
ACGAGGCGGACCCGGCTCTGGCCCAGCGTGTCGGCAAGGGCATGTGTCTG
ACCCTGGGCAGCCACACAACTGTGCTGTCGCAGCGGAACGGTGACGGCTG
CGTCCGGACCTACGGGTTCATGCGGCTGCCGGAGGACTGGCACACGACGT
GCGGCATCGACTGGACCCAGCCGCAGCAGGCCAAGCGGGAGTTCGTCGAT
CGTTACTATGAAGGGTTCAACGATGACTCCAAGAACCTTATGCTCGACGC
CGACGATGATTTGGTGCCTCGCCCCATGTACATGCTTCCTATTGGTCACA
AGTGGCAGCACCGTGCCGGTTTGACTCTTATTGGCGATGCTGCCCACTTA
ATGACACCATTTGCGGGAGTTGGCGTGAACGTGGGGATGGAGGACGCTCT
GGAGCTGGCACGGGCCATCATCGCGCGCAAGACCAGCTGGGAAGATGGCC
AGCCTTTCGCAGGTGCGAATAGTCTCTCCGCCGCAGTGGGGCAATACGAA
CAGGCCATGTTCCCTCGTGCTGAGGGCTACGCCCGCGAGACGTGGATGTA
TCTCAACTTGTTCTTCAATGAGCGGGGTGGTCATGCCATGTGTGAGCACT
TTGCTAAAGCGAAGGAGCAGGCCAAGGTGGAGGCTGCGGTGGAGAAGAAG
CCTGAAGAGACGGAGAAGACTGCGGAGGTGAAGCAGACGGTGGTGGTGGA
GCAGGCCATTCCTGTGGAGTAAATGGCTCCTCCTAAGATTGCAATCATCG
GTGCGGGCCCTGCCGGTCTTACTTTGGCCCGTCTGCTGCAACACAACGGC
ATCCCCTGCATCGTCTACGAGGCAGAGGAGAACCGCCATGCTCGCACACA
GGGTGGTTGCTTGGACATCCACGAGGGGTCTGCACAGGTAGCTCTGCGCG
AGTGTGGTCTTTTCGAAGAGTTCATGGCTGTTGCCCGCACGGAGGGTGAG
GTGTTGAAGATCTACCAGCCCGACGGCGCACTGCTGCTCGACGAAGGTTC
CGACTACGGCGAGAAGCGCCCAGACTCATTCAATGGACGCCCAGAAGTCG
ACCGGGTGAAGCTGCGCAGCATGCTGATTGACTCTCTCGAATGGGGCAGT
CTTCGCTGGGGCCACAAACTCAAGAAGGTCACCACTGAAGCCACGGGCAC
CCGTCTGCAATACGACCTGCACTTCCAAGACCACACAGAGACCGGGTTCG
ACTTGGTGGTGGGCGCCGACGGGGCCTGGAGCAAGGTACGCCATTTGCTT
ACGGACACCCGGCCCATCTTCTCGGGGATCTCTGGCGTGGATTTCAAGTA
CAGCGCCATCGACGAGGCGGACCCGGCTCTGGCCCAGCGTGTCGGCAAGG
GCATGTGTCTGACCCTGGGCAGCCACACAACTGTGCTGTCGCAGCGGAAC
GGTGACGGCTGCGTCCGGACCTACGGGTTCATGCGGCTGCCGGAGGACTG
GCACACGACGTGCGGCATCGACTGGACCCAGCCGCAGCAGGCCAAGCGGG
AGTTCGTCGATCGTTACTATGAAGGGTTCAACGATGACTCCAAGAACCTT
ATGCTCGACGCCGACGATGATTTGGTGCCTCGCCCCATGTACATGCTTCC
TATTGGTCACAAGTGGCAGCACCGTGCCGGTTTGACTCTTATTGGCGATG
CTGCCCACTTAATGACACCATTTGCGGGAGTTGGCGTGAACGTGGGGATG
GAGGACGCTCTGGAGCTGGCACGGGCCATCATCGCGCGCAAGACCAGCTG
GGAAGATGGCCAGCCTTTCGCAGGTGCGAATAGTCTCTCCGCCGCAGTGG
GGCAATACGAACAGGCCATGTTCCCTCGTGCTGAGGGCTACGCCCGCGAG
ACGTGGATGTATCTCAACTTGTTCTTCAATGAGCGGGGTGGTCATGCCAT
GTGTGAGCACTTTGCTAAAGCGAAGGAGCAGGCCAAGGTGGAGGCTGCGG
TGGAGAAGAAGCCTGAAGAGACGGAGAAGACTGCGGAGGTGAAGCAGACG
GTGGTGGTGGAGCAGGCCATTCCTGTGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000220KJC3_000220Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000220-T1KJC3_000220-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000220-T1.utr5p1KJC3_000220-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000220-T1.exon1KJC3_000220-T1.exon1Aspergillus niger KJC3exon
KJC3_000220-T1.exon2KJC3_000220-T1.exon2Aspergillus niger KJC3exon
KJC3_000220-T1.exon3KJC3_000220-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000220-T1.cdsKJC3_000220-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000220-T1.utr3p1KJC3_000220-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.1
NoteSMCOG1087:hypothetical protein
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:282816..284441 +
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