You are here

Home

KJC3_000226-T1, KJC3_000226-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000226-T1
Unique NameKJC3_000226-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:297218..298934+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000226-T1 ID=KJC3_000226-T1|Name=KJC3_000226-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1717bp|location=Sequence derived from alignment at ch1:297218..298934+ (Aspergillus niger KJC3)
CATCAGTCAGCCAACACTGTCACTGTCCGTGTAACACTTCCCCTATACTC
CATTATGTGCTGGCATCGGACAGCTGGGTAATCCCGAGATGAGTCGGGCC
ACCGGGTTAAGGGGCGGAAACTTGAAACTGGACGCCTTGTGAACGGCGTA
TGTGGTATATAAGGAACCAAGTCCCGCTGTAGTCTTCGGTTCATCAGACC
CAGCACAGCACAGCAACACAACATTACAGCATAGCAAGCACTTCTCTATA
TTTCTACACATCACAGCACATTTCTATACAGTTTACGTCTAATTATCTCC
TGCAACTACCATGTCCACCCACGTCGCCATCATCGGCACCGGTCTCTCCG
GCCTGGCCCTAGCCCTCTCCCTGCACCAACAATCCATCCCCTGCACTCTC
TACGAGGCCCGCTCCGCTCCACTGAACATCGGCGGAGCCATCATGCTCTC
CCCCAACGCCCTCCGCATCCTCGACACCCTAGGCGTCTACTCCCGGATCC
GCTCGGAAGCCTACGACTTCGACCACCTGTACTTCCGCTCTCCCGCCGAC
ACTCCCCTCGACACATACGAGTTCGGCAGCGCCGCCAAATACGGCTACAG
CGGGATGCGCATCTACCGCCATGTACTGATCCGGGAACTCTCCGCCATGG
TAGCGGAAGCCGGTGTGCCCATCCACTACCACAAGAAATTCAGCCGGGTG
ATCACGGAGACCGAATCATCCATCACCTGGGAATTCGAAGACGGGACCAC
CGAGACAGCTACCTGTCTCGTCGGCGCCGACGGCATCCACTCCAAAGTGC
GGAAGTACCTGTACCCTGAGCTGGAACCGAAGTTCATGAACGCCATGGCC
GTCACGGCCGCCGTACCGACGGCTCAACTCGCCGTTCCGGAGGGGTACAA
CATGCCCGTGACGATCATGAACAAGACGCACGGCGCGTTTGTGATCGCGC
CGCAGCTACGGGATGGATCCGAGGTGTTGATTGGACGACAGAAGCGGTCC
GCGCAGCTCGACCGCGAGGGATGGAATAAGCTGATGAACGACAAGGACTG
GTGTGTGGATTTCCTGCGCGAGGGAGCGGACGAGTTCCCTGAGATTGTGC
AGCGGGCTGTGTCGGATATCTCGGCGGAGAAAATCAACCTGTGGCCGTTT
TATATGGTTCCGAAGTTGGAGAAGTGGAGTTCGGAGCACTCGAGGGTGGT
GATTCTGGGTGATGCGGCACATGCGATCCCGCCGTCTGCCGGGCAGGGGA
TTAACCAGGCGTTTGAGGATGTGTATACTTATGCGTTGATTCTGGCGAAG
TGTGAGAAGGCTGGGTTGCAGCGGGCGCTGAAGATCTGGCAGCAGGGGAG
ACAGGAGAGGGTGGATAAGGTGTTGGCTTTGAATGCGCGGATTGATAAGC
GGAGGATGCCGAAGCCTGCTGGGGGTGAGGAGAAGGAGGCTGAGGATGAG
AAGCCGTTTGAGTTGGGGTGGTTGTATAAGCCGGACTTTGGGGCTATGGT
GGAGGAGTGGTTGGCGAGGGAATGACTGCATGGTTGTGGGACTGGCAGTT
GGAAGTATTGGGTGAAATTGGGTGCTATTTCGGGTGTTTTGGGCTTGTTG
ATGATGAAATTGAGAGCGTGATTGTGTTATTGTTCGCTTTCATGATGTTT
ATTGCTTGAAAAGTGTTTGGATGGTAATATAGGGATTTAATGGCATTTGC
TTGTTCTACTACGATTT
back to top

Coding sequence (CDS) from alignment at ch1:297218..298934+

>KJC3_000226-T1 ID=KJC3_000226-T1|Name=KJC3_000226-T1|organism=Aspergillus niger KJC3|type=CDS|length=1215bp|location=Sequence derived from alignment at ch1:297218..298934+ (Aspergillus niger KJC3)
ATGTCCACCCACGTCGCCATCATCGGCACCGGTCTCTCCGGCCTGGCCCT
AGCCCTCTCCCTGCACCAACAATCCATCCCCTGCACTCTCTACGAGGCCC
GCTCCGCTCCACTGAACATCGGCGGAGCCATCATGCTCTCCCCCAACGCC
CTCCGCATCCTCGACACCCTAGGCGTCTACTCCCGGATCCGCTCGGAAGC
CTACGACTTCGACCACCTGTACTTCCGCTCTCCCGCCGACACTCCCCTCG
ACACATACGAGTTCGGCAGCGCCGCCAAATACGGCTACAGCGGGATGCGC
ATCTACCGCCATGTACTGATCCGGGAACTCTCCGCCATGGTAGCGGAAGC
CGGTGTGCCCATCCACTACCACAAGAAATTCAGCCGGGTGATCACGGAGA
CCGAATCATCCATCACCTGGGAATTCGAAGACGGGACCACCGAGACAGCT
ACCTGTCTCGTCGGCGCCGACGGCATCCACTCCAAAGTGCGGAAGTACCT
GTACCCTGAGCTGGAACCGAAGTTCATGAACGCCATGGCCGTCACGGCCG
CCGTACCGACGGCTCAACTCGCCGTTCCGGAGGGGTACAACATGCCCGTG
ACGATCATGAACAAGACGCACGGCGCGTTTGTGATCGCGCCGCAGCTACG
GGATGGATCCGAGGTGTTGATTGGACGACAGAAGCGGTCCGCGCAGCTCG
ACCGCGAGGGATGGAATAAGCTGATGAACGACAAGGACTGGTGTGTGGAT
TTCCTGCGCGAGGGAGCGGACGAGTTCCCTGAGATTGTGCAGCGGGCTGT
GTCGGATATCTCGGCGGAGAAAATCAACCTGTGGCCGTTTTATATGGTTC
CGAAGTTGGAGAAGTGGAGTTCGGAGCACTCGAGGGTGGTGATTCTGGGT
GATGCGGCACATGCGATCCCGCCGTCTGCCGGGCAGGGGATTAACCAGGC
GTTTGAGGATGTGTATACTTATGCGTTGATTCTGGCGAAGTGTGAGAAGG
CTGGGTTGCAGCGGGCGCTGAAGATCTGGCAGCAGGGGAGACAGGAGAGG
GTGGATAAGGTGTTGGCTTTGAATGCGCGGATTGATAAGCGGAGGATGCC
GAAGCCTGCTGGGGGTGAGGAGAAGGAGGCTGAGGATGAGAAGCCGTTTG
AGTTGGGGTGGTTGTATAAGCCGGACTTTGGGGCTATGGTGGAGGAGTGG
TTGGCGAGGGAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000226KJC3_000226Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000226-T1.utr5p1KJC3_000226-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000226-T1.exon1KJC3_000226-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000226-T1.cdsKJC3_000226-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000226-T1.utr3p1KJC3_000226-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000226-T1KJC3_000226-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1.1
NoteSECRETED:SignalP(1-18)
NoteSMCOG1087:hypothetical protein
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:297218..298934 +
Powered by Drupal