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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:299225..300166+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000227-T1 ID=KJC3_000227-T1|Name=KJC3_000227-T1|organism=Aspergillus niger KJC3|type=mRNA|length=942bp|location=Sequence derived from alignment at ch1:299225..300166+ (Aspergillus niger KJC3)
ATGGCTCCTGTTATCGTCTTCGGTCCAACAGGCGCGGTCGGCTCGGCCGC
CGCGCGCACCGCCCAGCAGCTGGGAACCACAGTGTATCTCGCCATGCGAG
ACCCCACGAAACTCATTCCTGGTCTCAGTGTGGAGAAGGAACGCGAGGGA
GGTTTCGAACGCGTTCAGGCCAATTTCTCGCAGCCAGATACCATCTCCAC
TGCGGTAGCACAGAGCAAAGCAAAACACGCCTTCATCTACACCGATCTGA
CCTCATCTGACCACATGCGATCAAGCTTCACCGCTCTCAAAGAGGCCGGT
ATCGAATCGGTCGTTCTGCTGAGCAGCTTCGGCATCCAGGAAGATGTTCG
CAATGTGTCGCCTGAGGATCACATCGCCTATGTGCACGCGCAGGCCGAGA
TCTCCCTGCAGGAGGTTTTCGGAGAGAATGGCTATGTAGCGGTTCGGCCG
GGCTTTTACGCGAGTAATACGCTCTGGTGGAAGGCTCCTATTCAAACTGG
ACACGTGAAGCTCGCTTGGCCAGCGGCACCTTTTGACTGGATTTCTCCGG
AAGATATTGGAAGCGTTTGCGGCACGATCCTTGCCCGCAGGGCCCAGGGA
ATCGATCTGTCATTGACCGAGTCGTACGTCAATCTGGTTGGCGCGGAGCA
GATGGGCGTTGGGGATGCCGTCAAGACCATAGGAAAAGTCCTGGACAAGG
AGGTCAACGTCACCGAGGTGGACGTTAATGTAGCCTTGGACAGTCTAGTG
AATGAGTCCGGGCTGCCCGAGCCGATCGCGCGATCAGTGCTTGGATTTTG
CGAGAGCGCTACGACCGGCCAGTCCTTTATTGACAGTCCCCGGTATGGTC
CTGCTGTTGGCAATATTGAAAAGTACCTTGGCCGGCCAGCGACAAGATTG
CATGAGTGGGTAGAGGTGAACCAAGAGAAGTTCAATGCTTGA back to topCoding sequence (CDS) from alignment at ch1:299225..300166+ >KJC3_000227-T1 ID=KJC3_000227-T1|Name=KJC3_000227-T1|organism=Aspergillus niger KJC3|type=CDS|length=942bp|location=Sequence derived from alignment at ch1:299225..300166+ (Aspergillus niger KJC3)
ATGGCTCCTGTTATCGTCTTCGGTCCAACAGGCGCGGTCGGCTCGGCCGC
CGCGCGCACCGCCCAGCAGCTGGGAACCACAGTGTATCTCGCCATGCGAG
ACCCCACGAAACTCATTCCTGGTCTCAGTGTGGAGAAGGAACGCGAGGGA
GGTTTCGAACGCGTTCAGGCCAATTTCTCGCAGCCAGATACCATCTCCAC
TGCGGTAGCACAGAGCAAAGCAAAACACGCCTTCATCTACACCGATCTGA
CCTCATCTGACCACATGCGATCAAGCTTCACCGCTCTCAAAGAGGCCGGT
ATCGAATCGGTCGTTCTGCTGAGCAGCTTCGGCATCCAGGAAGATGTTCG
CAATGTGTCGCCTGAGGATCACATCGCCTATGTGCACGCGCAGGCCGAGA
TCTCCCTGCAGGAGGTTTTCGGAGAGAATGGCTATGTAGCGGTTCGGCCG
GGCTTTTACGCGAGTAATACGCTCTGGTGGAAGGCTCCTATTCAAACTGG
ACACGTGAAGCTCGCTTGGCCAGCGGCACCTTTTGACTGGATTTCTCCGG
AAGATATTGGAAGCGTTTGCGGCACGATCCTTGCCCGCAGGGCCCAGGGA
ATCGATCTGTCATTGACCGAGTCGTACGTCAATCTGGTTGGCGCGGAGCA
GATGGGCGTTGGGGATGCCGTCAAGACCATAGGAAAAGTCCTGGACAAGG
AGGTCAACGTCACCGAGGTGGACGTTAATGTAGCCTTGGACAGTCTAGTG
AATGAGTCCGGGCTGCCCGAGCCGATCGCGCGATCAGTGCTTGGATTTTG
CGAGAGCGCTACGACCGGCCAGTCCTTTATTGACAGTCCCCGGTATGGTC
CTGCTGTTGGCAATATTGAAAAGTACCTTGGCCGGCCAGCGACAAGATTG
CATGAGTGGGTAGAGGTGAACCAAGAGAAGTTCAATGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.1 |
| Note | SMCOG1199:NmrA family protein |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:299225..300166 + |
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