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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:301078..304071- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000228-T1 ID=KJC3_000228-T1|Name=KJC3_000228-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2994bp|location=Sequence derived from alignment at ch1:301078..304071- (Aspergillus niger KJC3)
GTCGAATATATGATTTGGGAAAGGCTCAGCCGCATCGAATCGGGCTATAA
GCAGTACATTGATCGAGTCTTCGTTGTGAGAATTCCAGACTTCTGAAAAC
CGGCACCTCCTTGCCAGCTACGTGTGTGACCTTTCCGACTTTCTCATCCG
AGCACGATGAGGGATTTGTCGCCAGGCGGAACGCGTTTATGGCGTTGGCT
GTCACTCCAGACGAGAACCTATCGACATCTCCGCAACAGCTTGCGGACGG
CGGAAGGCATTGAACCGGTACCTGTACACCATGCCAGCACTAGTGAAATC
ACCCATGATCGCGAACATATCGCACGACCACACCCTTCCCTTTCGTCCTT
AAAACTCTCGACACACCAAGACAGTCGGAGAAGATGGGTACGGGGGTACT
GATATGTACTTATGCCGCCTTTGGCATTCTACTGGTGAATGTCATCCTGA
CCATCGTGGCGGCCGCCGTGGCGGTCGCGCGCCATGACCAGCGGACGATG
AGCTCGGCCACCATCTACAAGGGCAGTTGCGACCGAACAAAGGCGTGGAC
GACGGGTCTGCATCTGCTGATCAACGTCCTCAGCACCATCGTTCTCGGGG
CCAGTAGTTACTGTATGCAGTGCTTAACTTCGCCCTCTCGTGTCGATGTC
GACCGCGCCCATGGGCAGCGTGTGTGGCTGGACATCGGGGTCGCCAGCGT
GCGGAATCTGGCATGGGCGGATTGGCCTCGACGGACCTTGTGGCTGGTAC
TTCTTGTAACCTCTATACCCATTCACTTGATGTATGCCAGTATCCATTCT
CGAGAGAGTTGGCCCTAATGACGGAACATTAGATACAACTCCGCTGTGTT
TTTTGCCTTGGGCACAAGGGAGTACGAAGTCGTGCTGGCATCCGCGAATT
TCGATTTCGATCGCCCACCGGCCCATTATAACTCCTCGTTTGAGGAGTGT
TTTGAGTCTAATACGGCGATGAGCATGTCCACTTTCTATGCGGATCTTCC
TAGCTTCGACAATTTGACCAGAGAGGAATGTATTCGCAGATACGCGATGG
ATTTTCCGACGGACCTCGGCACCCTGATCTTGGTGACCAGCAACCTCACC
GCTGCCAACCAACGCCTGCAGTGGATTTATTGGGGAAACTCAGTCGCAAA
TGATGGGCAAATCATGACAAGCAACTATGACTGGCTCTGCGCTCAATTCG
GCGTGCTTTCATCCTCCTGCACCCCGCCGAAACTCCTAAGTGCTCTTGAT
CAATGGGCCGCCTCGCCCCTCGTGCCCTGGGCTGGTCCAGTAGTCAATGC
CACGGTCGAGCTTCCCAGTGGTTTAGCTACCATAAACGGAAAGGTTCTTT
ACGATTCAGGGAGGGACACCAGGAACTGGTCTAGAAATCTAATGCATGAT
GTCCAAGCTCTTACACAGGAGCTCATGGAGTTCCCATCGACCCGAGTCTT
GCAGCAGTACCTGGATAATTCTACTCATTGGAAGAACGACACGTGGGCTC
AGGCTGTGAGCCTTGTACCGGTTGTGGATGAGGTAGCATGTGCTCCCGAC
TTCCTAAGAATTGAGGTCGAGGGGCCAGAGTATCCTGTCGAATATTGTTT
GAGTCGGAAGCTCACCGAACAATGTGAGCTGCAGTTCAGCCCGGCGATCT
GCCTGGCGGTGATTGTCTGCAATGTGTTCAAGGTTCTGTGTATGTTATTA
ACGGCCCGGAGTGATCGGACGGAAATCTTCCTGACAGTTGGAGATGCTGT
GGCGTCGTTTCTGACTCAACCTGATCCCTCTACCGAGCGGATGTGCCTGA
CCTCCCGATTGAATCTGACCCAAGGGGCACAGCCCTGGCGGTCACGCCGT
GAGGGCTATTTGCAAATCGCGGTAAAGGATGCATCGCGACCCCAGGCACG
GGCAGCTCTTCCGCCTCGCCAGCGATGGATGCGAGCCGTGCATCCGAGCC
AGTGGATAATGACCATTGGTGTGTACGTGAAACCTTTATTGTGCTTGTGT
TGACCTTCACTGACGCATACAGCTGTCTTGTCCTTCTCGGTGTTGGCGGT
TATCTTTTGTCGCTAGCTATCCACGGTCTACAGGAGGAAGGTCACTCCAC
GACCTTCAGTGCGCTGTGGCAGCTGGGATTTGGCTCGGCCACGCCCTATA
CAATCTTCTCACTCCCACATTCAAACGTCGTCTCCATGTCGCTCCTCGCG
AACACGCCCCAGATTGCCGTCTCGATCGGTTACTTCCTGTACAACAACCT
CCTGACGCATATGCTTTTGGCCGCAGAACACGACGACTACGCGAGCCAGC
GGAAGGCCCTCCGCGTGTCTTGGCCTCAGGGATCCCAGCGGTCGTCGTAC
TATCTGAGTCTTCCGTATCGCTACAGCATTCCGCTTATGATTGCTTCGAT
GCTCCTGCATTGGCTGGTATCTGGTAGTTTGTTCTACGTCGCAATCAACC
CAATTGATATGCTAGGAAATACTGTGCATGCGAACCAGGTCATTACCTGC
GGATATGGGCCGATCGCCATTGTGTTCGCGCTTATTCTAGGGGGTGTGAT
GACGAGTACGGTCGTTGGTCTAGGCATGAGACGTTTCGCATCTCAAATGC
CCATTGCAGGCAGTTGCAGTGCGGCAGTCAGTGCTGCATGTCATCCAACA
GGGGGTGACGATCATGCCCTGAAGCCGATCATGTGGGGGGAGATTCCGGT
GGCCGCAGTCCAGCCGAATGGTATAGATGACGCGGATGAAATCATCAGTG
AACATGAAATTGAAGACAGGGAGGAGATTGGGGATGGTTGCTACTCGCCC
CTGAGCAGTGAGACGGCTGGTCAGGATGGTAGCTATGGCCATTGCAGTTT
CACCTCGGAGGAAGTGATCATTCCAAACCCATCACGACTGTATATGTAGA
CCTATGGATCACCGAAGGGCTGAAACCCAGCAGAGTAGCTCTCATGACAC
GTCTTGCGTCCATTATTATACCTCCAACTCATGTTATGTCCCTG back to topCoding sequence (CDS) from alignment at ch1:301078..304071- >KJC3_000228-T1 ID=KJC3_000228-T1|Name=KJC3_000228-T1|organism=Aspergillus niger KJC3|type=CDS|length=7245bp|location=Sequence derived from alignment at ch1:301078..304071- (Aspergillus niger KJC3)
CTGTCTTGTCCTTCTCGGTGTTGGCGGTTATCTTTTGTCGCTAGCTATCC
ACGGTCTACAGGAGGAAGGTCACTCCACGACCTTCAGTGCGCTGTGGCAG
CTGGGATTTGGCTCGGCCACGCCCTATACAATCTTCTCACTCCCACATTC
AAACGTCGTCTCCATGTCGCTCCTCGCGAACACGCCCCAGATTGCCGTCT
CGATCGGTTACTTCCTGTACAACAACCTCCTGACGCATATGCTTTTGGCC
GCAGAACACGACGACTACGCGAGCCAGCGGAAGGCCCTCCGCGTGTCTTG
GCCTCAGGGATCCCAGCGGTCGTCGTACTATCTGAGTCTTCCGTATCGCT
ACAGCATTCCGCTTATGATTGCTTCGATGCTCCTGCATTGGCTGGTATCT
GGTAGTTTGTTCTACGTCGCAATCAACCCAATTGATATGCTAGGAAATAC
TGTGCATGCGAACCAGGTCATTACCTGCGGATATGGGCCGATCGCCATTG
TGTTCGCGCTTATTCTAGGGGGTGTGATGACGAGTACGGTCGTTGGTCTA
GGCATGAGACGTTTCGCATCTCAAATGCCCATTGCAGGCAGTTGCAGTGC
GGCAGTCAGTGCTGCATGTCATCCAACAGGGGGTGACGATCATGCCCTGA
AGCCGATCATGTGGGGGGAGATTCCGGTGGCCGCAGTCCAGCCGAATGGT
ATAGATGACGCGGATGAAATCATCAGTGAACATGAAATTGAAGACAGGGA
GGAGATTGGGGATGGTTGCTACTCGCCCCTGAGCAGTGAGACGGCTGGTC
AGGATGGTAGCTATGGCCATTGCAGTTTCACCTCGGAGGAAGTGATCATT
CCAAACCCATCACGACTGTATATGTAGATACAACTCCGCTGTGTTTTTTG
CCTTGGGCACAAGGGAGTACGAAGTCGTGCTGGCATCCGCGAATTTCGAT
TTCGATCGCCCACCGGCCCATTATAACTCCTCGTTTGAGGAGTGTTTTGA
GTCTAATACGGCGATGAGCATGTCCACTTTCTATGCGGATCTTCCTAGCT
TCGACAATTTGACCAGAGAGGAATGTATTCGCAGATACGCGATGGATTTT
CCGACGGACCTCGGCACCCTGATCTTGGTGACCAGCAACCTCACCGCTGC
CAACCAACGCCTGCAGTGGATTTATTGGGGAAACTCAGTCGCAAATGATG
GGCAAATCATGACAAGCAACTATGACTGGCTCTGCGCTCAATTCGGCGTG
CTTTCATCCTCCTGCACCCCGCCGAAACTCCTAAGTGCTCTTGATCAATG
GGCCGCCTCGCCCCTCGTGCCCTGGGCTGGTCCAGTAGTCAATGCCACGG
TCGAGCTTCCCAGTGGTTTAGCTACCATAAACGGAAAGGTTCTTTACGAT
TCAGGGAGGGACACCAGGAACTGGTCTAGAAATCTAATGCATGATGTCCA
AGCTCTTACACAGGAGCTCATGGAGTTCCCATCGACCCGAGTCTTGCAGC
AGTACCTGGATAATTCTACTCATTGGAAGAACGACACGTGGGCTCAGGCT
GTGAGCCTTGTACCGGTTGTGGATGAGGTAGCATGTGCTCCCGACTTCCT
AAGAATTGAGGTCGAGGGGCCAGAGTATCCTGTCGAATATTGTTTGAGTC
GGAAGCTCACCGAACAATGTGAGCTGCAGTTCAGCCCGGCGATCTGCCTG
GCGGTGATTGTCTGCAATGTGTTCAAGGTTCTGTGTATGTTATTAACGGC
CCGGAGTGATCGGACGGAAATCTTCCTGACAGTTGGAGATGCTGTGGCGT
CGTTTCTGACTCAACCTGATCCCTCTACCGAGCGGATGTGCCTGACCTCC
CGATTGAATCTGACCCAAGGGGCACAGCCCTGGCGGTCACGCCGTGAGGG
CTATTTGCAAATCGCGGTAAAGGATGCATCGCGACCCCAGGCACGGGCAG
CTCTTCCGCCTCGCCAGCGATGGATGCGAGCCGTGCATCCGAGCCAGTGG
ATAATGACCATTGGTGTATGGGTACGGGGGTACTGATATGTACTTATGCC
GCCTTTGGCATTCTACTGGTGAATGTCATCCTGACCATCGTGGCGGCCGC
CGTGGCGGTCGCGCGCCATGACCAGCGGACGATGAGCTCGGCCACCATCT
ACAAGGGCAGTTGCGACCGAACAAAGGCGTGGACGACGGGTCTGCATCTG
CTGATCAACGTCCTCAGCACCATCGTTCTCGGGGCCAGTAGTTACTGTAT
GCAGTGCTTAACTTCGCCCTCTCGTGTCGATGTCGACCGCGCCCATGGGC
AGCGTGTGTGGCTGGACATCGGGGTCGCCAGCGTGCGGAATCTGGCATGG
GCGGATTGGCCTCGACGGACCTTGTGGCTGGTACTTCTTGTAACCTCTAT
ACCCATTCACTTGATCTGTCTTGTCCTTCTCGGTGTTGGCGGTTATCTTT
TGTCGCTAGCTATCCACGGTCTACAGGAGGAAGGTCACTCCACGACCTTC
AGTGCGCTGTGGCAGCTGGGATTTGGCTCGGCCACGCCCTATACAATCTT
CTCACTCCCACATTCAAACGTCGTCTCCATGTCGCTCCTCGCGAACACGC
CCCAGATTGCCGTCTCGATCGGTTACTTCCTGTACAACAACCTCCTGACG
CATATGCTTTTGGCCGCAGAACACGACGACTACGCGAGCCAGCGGAAGGC
CCTCCGCGTGTCTTGGCCTCAGGGATCCCAGCGGTCGTCGTACTATCTGA
GTCTTCCGTATCGCTACAGCATTCCGCTTATGATTGCTTCGATGCTCCTG
CATTGGCTGGTATCTGGTAGTTTGTTCTACGTCGCAATCAACCCAATTGA
TATGCTAGGAAATACTGTGCATGCGAACCAGGTCATTACCTGCGGATATG
GGCCGATCGCCATTGTGTTCGCGCTTATTCTAGGGGGTGTGATGACGAGT
ACGGTCGTTGGTCTAGGCATGAGACGTTTCGCATCTCAAATGCCCATTGC
AGGCAGTTGCAGTGCGGCAGTCAGTGCTGCATGTCATCCAACAGGGGGTG
ACGATCATGCCCTGAAGCCGATCATGTGGGGGGAGATTCCGGTGGCCGCA
GTCCAGCCGAATGGTATAGATGACGCGGATGAAATCATCAGTGAACATGA
AATTGAAGACAGGGAGGAGATTGGGGATGGTTGCTACTCGCCCCTGAGCA
GTGAGACGGCTGGTCAGGATGGTAGCTATGGCCATTGCAGTTTCACCTCG
GAGGAAGTGATCATTCCAAACCCATCACGACTGTATATGTAGATACAACT
CCGCTGTGTTTTTTGCCTTGGGCACAAGGGAGTACGAAGTCGTGCTGGCA
TCCGCGAATTTCGATTTCGATCGCCCACCGGCCCATTATAACTCCTCGTT
TGAGGAGTGTTTTGAGTCTAATACGGCGATGAGCATGTCCACTTTCTATG
CGGATCTTCCTAGCTTCGACAATTTGACCAGAGAGGAATGTATTCGCAGA
TACGCGATGGATTTTCCGACGGACCTCGGCACCCTGATCTTGGTGACCAG
CAACCTCACCGCTGCCAACCAACGCCTGCAGTGGATTTATTGGGGAAACT
CAGTCGCAAATGATGGGCAAATCATGACAAGCAACTATGACTGGCTCTGC
GCTCAATTCGGCGTGCTTTCATCCTCCTGCACCCCGCCGAAACTCCTAAG
TGCTCTTGATCAATGGGCCGCCTCGCCCCTCGTGCCCTGGGCTGGTCCAG
TAGTCAATGCCACGGTCGAGCTTCCCAGTGGTTTAGCTACCATAAACGGA
AAGGTTCTTTACGATTCAGGGAGGGACACCAGGAACTGGTCTAGAAATCT
AATGCATGATGTCCAAGCTCTTACACAGGAGCTCATGGAGTTCCCATCGA
CCCGAGTCTTGCAGCAGTACCTGGATAATTCTACTCATTGGAAGAACGAC
ACGTGGGCTCAGGCTGTGAGCCTTGTACCGGTTGTGGATGAGGTAGCATG
TGCTCCCGACTTCCTAAGAATTGAGGTCGAGGGGCCAGAGTATCCTGTCG
AATATTGTTTGAGTCGGAAGCTCACCGAACAATGTGAGCTGCAGTTCAGC
CCGGCGATCTGCCTGGCGGTGATTGTCTGCAATGTGTTCAAGGTTCTGTG
TATGTTATTAACGGCCCGGAGTGATCGGACGGAAATCTTCCTGACAGTTG
GAGATGCTGTGGCGTCGTTTCTGACTCAACCTGATCCCTCTACCGAGCGG
ATGTGCCTGACCTCCCGATTGAATCTGACCCAAGGGGCACAGCCCTGGCG
GTCACGCCGTGAGGGCTATTTGCAAATCGCGGTAAAGGATGCATCGCGAC
CCCAGGCACGGGCAGCTCTTCCGCCTCGCCAGCGATGGATGCGAGCCGTG
CATCCGAGCCAGTGGATAATGACCATTGGTGTATGGGTACGGGGGTACTG
ATATGTACTTATGCCGCCTTTGGCATTCTACTGGTGAATGTCATCCTGAC
CATCGTGGCGGCCGCCGTGGCGGTCGCGCGCCATGACCAGCGGACGATGA
GCTCGGCCACCATCTACAAGGGCAGTTGCGACCGAACAAAGGCGTGGACG
ACGGGTCTGCATCTGCTGATCAACGTCCTCAGCACCATCGTTCTCGGGGC
CAGTAGTTACTGTATGCAGTGCTTAACTTCGCCCTCTCGTGTCGATGTCG
ACCGCGCCCATGGGCAGCGTGTGTGGCTGGACATCGGGGTCGCCAGCGTG
CGGAATCTGGCATGGGCGGATTGGCCTCGACGGACCTTGTGGCTGGTACT
TCTTGTAACCTCTATACCCATTCACTTGATCTGTCTTGTCCTTCTCGGTG
TTGGCGGTTATCTTTTGTCGCTAGCTATCCACGGTCTACAGGAGGAAGGT
CACTCCACGACCTTCAGTGCGCTGTGGCAGCTGGGATTTGGCTCGGCCAC
GCCCTATACAATCTTCTCACTCCCACATTCAAACGTCGTCTCCATGTCGC
TCCTCGCGAACACGCCCCAGATTGCCGTCTCGATCGGTTACTTCCTGTAC
AACAACCTCCTGACGCATATGCTTTTGGCCGCAGAACACGACGACTACGC
GAGCCAGCGGAAGGCCCTCCGCGTGTCTTGGCCTCAGGGATCCCAGCGGT
CGTCGTACTATCTGAGTCTTCCGTATCGCTACAGCATTCCGCTTATGATT
GCTTCGATGCTCCTGCATTGGCTGGTATCTGGTAGTTTGTTCTACGTCGC
AATCAACCCAATTGATATGCTAGGAAATACTGTGCATGCGAACCAGGTCA
TTACCTGCGGATATGGGCCGATCGCCATTGTGTTCGCGCTTATTCTAGGG
GGTGTGATGACGAGTACGGTCGTTGGTCTAGGCATGAGACGTTTCGCATC
TCAAATGCCCATTGCAGGCAGTTGCAGTGCGGCAGTCAGTGCTGCATGTC
ATCCAACAGGGGGTGACGATCATGCCCTGAAGCCGATCATGTGGGGGGAG
ATTCCGGTGGCCGCAGTCCAGCCGAATGGTATAGATGACGCGGATGAAAT
CATCAGTGAACATGAAATTGAAGACAGGGAGGAGATTGGGGATGGTTGCT
ACTCGCCCCTGAGCAGTGAGACGGCTGGTCAGGATGGTAGCTATGGCCAT
TGCAGTTTCACCTCGGAGGAAGTGATCATTCCAAACCCATCACGACTGTA
TATGTAGATACAACTCCGCTGTGTTTTTTGCCTTGGGCACAAGGGAGTAC
GAAGTCGTGCTGGCATCCGCGAATTTCGATTTCGATCGCCCACCGGCCCA
TTATAACTCCTCGTTTGAGGAGTGTTTTGAGTCTAATACGGCGATGAGCA
TGTCCACTTTCTATGCGGATCTTCCTAGCTTCGACAATTTGACCAGAGAG
GAATGTATTCGCAGATACGCGATGGATTTTCCGACGGACCTCGGCACCCT
GATCTTGGTGACCAGCAACCTCACCGCTGCCAACCAACGCCTGCAGTGGA
TTTATTGGGGAAACTCAGTCGCAAATGATGGGCAAATCATGACAAGCAAC
TATGACTGGCTCTGCGCTCAATTCGGCGTGCTTTCATCCTCCTGCACCCC
GCCGAAACTCCTAAGTGCTCTTGATCAATGGGCCGCCTCGCCCCTCGTGC
CCTGGGCTGGTCCAGTAGTCAATGCCACGGTCGAGCTTCCCAGTGGTTTA
GCTACCATAAACGGAAAGGTTCTTTACGATTCAGGGAGGGACACCAGGAA
CTGGTCTAGAAATCTAATGCATGATGTCCAAGCTCTTACACAGGAGCTCA
TGGAGTTCCCATCGACCCGAGTCTTGCAGCAGTACCTGGATAATTCTACT
CATTGGAAGAACGACACGTGGGCTCAGGCTGTGAGCCTTGTACCGGTTGT
GGATGAGGTAGCATGTGCTCCCGACTTCCTAAGAATTGAGGTCGAGGGGC
CAGAGTATCCTGTCGAATATTGTTTGAGTCGGAAGCTCACCGAACAATGT
GAGCTGCAGTTCAGCCCGGCGATCTGCCTGGCGGTGATTGTCTGCAATGT
GTTCAAGGTTCTGTGTATGTTATTAACGGCCCGGAGTGATCGGACGGAAA
TCTTCCTGACAGTTGGAGATGCTGTGGCGTCGTTTCTGACTCAACCTGAT
CCCTCTACCGAGCGGATGTGCCTGACCTCCCGATTGAATCTGACCCAAGG
GGCACAGCCCTGGCGGTCACGCCGTGAGGGCTATTTGCAAATCGCGGTAA
AGGATGCATCGCGACCCCAGGCACGGGCAGCTCTTCCGCCTCGCCAGCGA
TGGATGCGAGCCGTGCATCCGAGCCAGTGGATAATGACCATTGGTGTATG
GGTACGGGGGTACTGATATGTACTTATGCCGCCTTTGGCATTCTACTGGT
GAATGTCATCCTGACCATCGTGGCGGCCGCCGTGGCGGTCGCGCGCCATG
ACCAGCGGACGATGAGCTCGGCCACCATCTACAAGGGCAGTTGCGACCGA
ACAAAGGCGTGGACGACGGGTCTGCATCTGCTGATCAACGTCCTCAGCAC
CATCGTTCTCGGGGCCAGTAGTTACTGTATGCAGTGCTTAACTTCGCCCT
CTCGTGTCGATGTCGACCGCGCCCATGGGCAGCGTGTGTGGCTGGACATC
GGGGTCGCCAGCGTGCGGAATCTGGCATGGGCGGATTGGCCTCGACGGAC
CTTGTGGCTGGTACTTCTTGTAACCTCTATACCCATTCACTTGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000228-T1.utr3p1 | KJC3_000228-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000228-T1.utr5p1 | KJC3_000228-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:301078..304071 - |
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