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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:306395..307584+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000230-T1 ID=KJC3_000230-T1|Name=KJC3_000230-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1190bp|location=Sequence derived from alignment at ch1:306395..307584+ (Aspergillus niger KJC3)
AAAAGCTCCCCAAAGAGTTCAGACTCTGCCCCGAGCTGTCAATCGGGCGC
ATATAAAGCCAGCCCACCGAGGGTTACTCCCGTTGTGATTAAAGCAAAAC
TCGAATGAGCTTGAGCCACCATGGCGCCCCTCCAGACTGTCTTGATCACC
GGCTGCTCCGCCAACGGCATCGGATCGGCCCTGGCCGTCGCGCTCGCCAA
TCAAGGCCACCACGTCTTCGCCACTGCGCGCTCACCATCCAAGATTCCGT
CGTCTCTCACCACTTTGTCCAATGTCACCCCTCTCCAGCTCGACGTCACG
TCATCAGAGTCTGTGGCTGCTGCCGTTCAGGCAGTCGAGCAGCATGGAAC
AGGCCTAGATATTCTCATCAACAATGCGGGCTCCGGTTACACCATGCCGC
TGCTGGACGTCGACCTCACCCAAGCCCAGCAGGTCTACGAGACCAACATC
TGGGGTCCGCTGCGTCTCGTTCAAGCACTAGCACCATTGCTAATATCCCG
TGGTGGACGCGTCGTCAACATAAGCAGCGTCGGCGCGGTAGTCCCCACAC
CATGGATCGGTACATCAGTCCTCTCCCTCTCGGTCGGCATGCAGTGTCAC
ATTAACAACGTGATACAGGAATCTACTCATCATCAAAATCCGCCTTGAGC
AATCTCTCTGAGACCCTCCGTCTCGAAGTAGCACCACTAGGTGTATCCGT
GGCCACGCTCATGATCGGCACCGTCACGACGCCGTTTCATGCAAACGAGC
CCCGATTCACCCTCCCACCAAACTCTCGATATGCAGCTATCGCGGAGACC
ATCTCCCGCTGGGCGTCAGGTGAGGCAAGTCCCAAGGGATGCTCAGCCCA
AGAGCTGGCGGATTTGATCCTGCCTGATGTACTTGGTACGACGGGACATG
GCATGTTCTGGCGCGGGCCGAATAGTGGTGCGGTGAAATTTGTTGCTCAA
TGGGTGCCTGGGTGGTTAGCTGTGAGTTTGTCCTCTCCTACCGAGGGTAT
TATTGCTAATGTTGGAATAGGATCGCATGATGAGCACTGGTCAGGGATTG
GATGAGCTCGCGGCGAGTCAGTCAAAGTGAAGGATGGGCCAGGCTCGCAT
AATTGTTTGGCTATATGTAAAATTATAGAAAGTAATTGCAGACCATTGGT
ACTCGCTATTTAGCCAGCTACATACATCCTTTTAAGGGGC back to topCoding sequence (CDS) from alignment at ch1:306395..307584+ >KJC3_000230-T1 ID=KJC3_000230-T1|Name=KJC3_000230-T1|organism=Aspergillus niger KJC3|type=CDS|length=2556bp|location=Sequence derived from alignment at ch1:306395..307584+ (Aspergillus niger KJC3)
ATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACGGCAT
CGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTCTTCG
CCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTTGTCC
AATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGGCTGC
TGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTCATCA
ACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCTCACC
CAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTCTCGT
TCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTCAACA
TAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGAATCTACTCA
TCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCGTCTCGAAGT
AGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCACCGTCACGA
CGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCAAACTCTCGA
TATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGGTGAGGCAAG
TCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCCTGCCTGATG
TACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCGAATAGTGGT
GCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGCTGATCGCAT
GATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCAGTCAAAGT
GAATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACGGC
ATCGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTCTT
CGCCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTTGT
CCAATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGGCT
GCTGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTCAT
CAACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCTCA
CCCAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTCTC
GTTCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTCAA
CATAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGAATCTACT
CATCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCGTCTCGAA
GTAGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCACCGTCAC
GACGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCAAACTCTC
GATATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGGTGAGGCA
AGTCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCCTGCCTGA
TGTACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCGAATAGTG
GTGCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGCTGATCGC
ATGATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCAGTCAAA
GTGAATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACG
GCATCGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTC
TTCGCCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTT
GTCCAATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGG
CTGCTGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTC
ATCAACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCT
CACCCAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTC
TCGTTCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTC
AACATAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGAATCTA
CTCATCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCGTCTCG
AAGTAGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCACCGTC
ACGACGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCAAACTC
TCGATATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGGTGAGG
CAAGTCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCCTGCCT
GATGTACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCGAATAG
TGGTGCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGCTGATC
GCATGATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCAGTCA
AAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000230-T1.utr5p1 | KJC3_000230-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000230-T1.utr3p1 | KJC3_000230-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF08643 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:306395..307584 + |
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