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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:369823..370862- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000251-T1 ID=KJC3_000251-T1|Name=KJC3_000251-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1040bp|location=Sequence derived from alignment at ch1:369823..370862- (Aspergillus niger KJC3)
ATGTCTTCGACCGCAGACCACTTGTCAGCAGCATCCACAAAGGCCATTGC
ACCGTATGTGAACCTCAGGCTTCCCTTATCTTGAAGCGGTAATGACTCCT
ACCTGAGCGTAGACGCTCAAAATCACAGACAGTTCAGGTCGAATTCGGAG
GTCAAAAGGTCGATGTACCCAAAGGAGGTTACTATGACCGCTACCGTATG
AACCCGAACCTGGATGAGGTAGCTCAGGACCCGAACATCGGACACGATAT
CGCATTTCTCCGGAAAATCCCCAAGAAGCTGGTCGATTCGAGGGTCGGTC
AAGTATATGCACCCAATTTCTATTATCGCACTAGCAGCGTCCAGCTCGTC
ATCCTCGCGCCTCTTGACCAATTAAAGTCTAAGCTCCCCGCGCCGTTGGA
GCCTCTTACAGCATTGCCGGGTTACGGCTTAGTTGCCTTGACATTTTATT
CGTATCTGGTCTGCGACAATGATCCTTATAACGAGGTCTCTATCGCCATC
ATCATTCGGCAGCCGGGTAACGCGAGTTATAGTCCCACACAACTGCTCAG
CTCGATATGGAACCGAACTTTCTACGGTTATGTCTTGGCTCTTCCCGTCG
ATACCGAGATTGCTCGGGTGAGGGGAATTTATGGATATCAACTCCCTAAA
TGGCTTGCCAATATTAACCTGAAGATGGACAATCACGACATCAAGGCCGA
CATCACCGCAACAGACGGAACACCCGATTTGAGACTGGATGTACCCCTTC
CCGCGTTGAGGAGCATTCCGTCAGAATCGCAAATTGGGACTAACAATGCA
GTCAATAAGATTGACGGGAAATGGTACCAGGTGGCGGTTCAAACAAACCC
CCTCTTGGCGACACAATCCCTATTTCCTACCAACGTCAAGCTTACTCGGA
ACGAAGGCCCATTGAGCCAACTACTCAACGAGTTGGGCGTTTCGACCATT
GTACGTATGGATGTTATTAAGGACGCCCAGATGGTCTTGAATATGCCCAC
CCCATTGAAGGTGTTCAACAGGGTCGGATCATTAGCTTAA back to topCoding sequence (CDS) from alignment at ch1:369823..370862- >KJC3_000251-T1 ID=KJC3_000251-T1|Name=KJC3_000251-T1|organism=Aspergillus niger KJC3|type=CDS|length=1962bp|location=Sequence derived from alignment at ch1:369823..370862- (Aspergillus niger KJC3)
ACGCTCAAAATCACAGACAGTTCAGGTCGAATTCGGAGGTCAAAAGGTCG
ATGTACCCAAAGGAGGTTACTATGACCGCTACCGTATGAACCCGAACCTG
GATGAGGTAGCTCAGGACCCGAACATCGGACACGATATCGCATTTCTCCG
GAAAATCCCCAAGAAGCTGGTCGATTCGAGGGTCGGTCAAGTATATGCAC
CCAATTTCTATTATCGCACTAGCAGCGTCCAGCTCGTCATCCTCGCGCCT
CTTGACCAATTAAAGTCTAAGCTCCCCGCGCCGTTGGAGCCTCTTACAGC
ATTGCCGGGTTACGGCTTAGTTGCCTTGACATTTTATTCGTATCTGGTCT
GCGACAATGATCCTTATAACGAGGTCTCTATCGCCATCATCATTCGGCAG
CCGGGTAACGCGAGTTATAGTCCCACACAACTGCTCAGCTCGATATGGAA
CCGAACTTTCTACGGTTATGTCTTGGCTCTTCCCGTCGATACCGAGATTG
CTCGGGTGAGGGGAATTTATGGATATCAACTCCCTAAATGGCTTGCCAAT
ATTAACCTGAAGATGGACAATCACGACATCAAGGCCGACATCACCGCAAC
AGACGGAACACCCGATTTGAGACTGGATGTACCCCTTCCCGCGTTGAGGA
GCATTCCGTCAGAATCGCAAATTGGGACTAACAATGCAGTCAATAAGATT
GACGGGAAATGGTACCAGGTGGCGGTTCAAACAAACCCCCTCTTGGCGAC
ACAATCCCTATTTCCTACCAACGTCAAGCTTACTCGGAACGAAGGCCCAT
TGAGCCAACTACTCAACGAGTTGGGCGTTTCGACCATTGTACGTATGGAT
GTTATTAAGGACGCCCAGATGGTCTTGAATATGCCCACCCCATTGAAGGT
GTTCAACAGGGTCGGATCATTAGCTTAAATGTCTTCGACCGCAGACCACT
TGTCAGCAGCATCCACAAAGGCCATTGCACCACGCTCAAAATCACAGACA
GTTCAGGTCGAATTCGGAGGTCAAAAGGTCGATGTACCCAAAGGAGGTTA
CTATGACCGCTACCGTATGAACCCGAACCTGGATGAGGTAGCTCAGGACC
CGAACATCGGACACGATATCGCATTTCTCCGGAAAATCCCCAAGAAGCTG
GTCGATTCGAGGGTCGGTCAAGTATATGCACCCAATTTCTATTATCGCAC
TAGCAGCGTCCAGCTCGTCATCCTCGCGCCTCTTGACCAATTAAAGTCTA
AGCTCCCCGCGCCGTTGGAGCCTCTTACAGCATTGCCGGGTTACGGCTTA
GTTGCCTTGACATTTTATTCGTATCTGGTCTGCGACAATGATCCTTATAA
CGAGGTCTCTATCGCCATCATCATTCGGCAGCCGGGTAACGCGAGTTATA
GTCCCACACAACTGCTCAGCTCGATATGGAACCGAACTTTCTACGGTTAT
GTCTTGGCTCTTCCCGTCGATACCGAGATTGCTCGGGTGAGGGGAATTTA
TGGATATCAACTCCCTAAATGGCTTGCCAATATTAACCTGAAGATGGACA
ATCACGACATCAAGGCCGACATCACCGCAACAGACGGAACACCCGATTTG
AGACTGGATGTACCCCTTCCCGCGTTGAGGAGCATTCCGTCAGAATCGCA
AATTGGGACTAACAATGCAGTCAATAAGATTGACGGGAAATGGTACCAGG
TGGCGGTTCAAACAAACCCCCTCTTGGCGACACAATCCCTATTTCCTACC
AACGTCAAGCTTACTCGGAACGAAGGCCCATTGAGCCAACTACTCAACGA
GTTGGGCGTTTCGACCATTGTACGTATGGATGTTATTAAGGACGCCCAGA
TGGTCTTGAATATGCCCACCCCATTGAAGGTGTTCAACAGGGTCGGATCA
TTAGCTTAAATGTCTTCGACCGCAGACCACTTGTCAGCAGCATCCACAAA
GGCCATTGCACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022272 |
| DBxref | InterPro:IPR010451 |
| DBxref | InterPro:IPR023375 |
| DBxref | PFAM:PF06314 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:369823..370862 - |
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