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KJC3_000258-T1, KJC3_000258-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000258-T1
Unique NameKJC3_000258-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:385007..387190+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000258-T1 ID=KJC3_000258-T1|Name=KJC3_000258-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2184bp|location=Sequence derived from alignment at ch1:385007..387190+ (Aspergillus niger KJC3)
GCTATCATTCACTATTTCGATAGCCATCTACTAAATATAATGAAATAGTA
TCCAAAAGAGGAGTGAATCTAGAGCGGTTATTGGCGGTCAGCGGCGCTCC
CACCGGACCGGATATCGGAGAGTCGGCGAGTCGGAGAGAAAGGGTCACGG
GGCGGGGTAACCTTGATAAGTTGATAAGAACCGCGGTTCCTGACGGATTC
CTTTGCTCTTCTCCATCTGCCACCATTTCGACATGCCTTCAATCAAAGTT
GCTGAGTACCTCTTCCGTCGGCTCAAAGACCTGGGCGTAGCTTCCGTCCA
CGGTGTGCCGGGCGATTTTAACCTCACTTTGCTCGACTATGTGGAGCCCG
CCGGTTTGCGATGGGTCGGTAACGCGAACGAGCTAAACGCCGCCTACGCC
GCCGACGGGTACGCCCGAATCAAAGGCATTGGCGCGGTTGTCACCACCTT
CGGTGTTGGGGAGCTGTCTGCTGTGAACGCGATCGCTGGAGCCTACACTG
AACGTGCGCCCGTCGTGCACATTGTGGGAACACCAGCCCGGGATTTGCAG
GAGGGACGGAAATTGGTCCACCATACCTTCAATGATGGCGAATATGGGCG
GTTTGCTAAGATCTACGAACACTTGACTATCGCTCAGGCCAGCCTGCGAG
ATCCACGAACCGCGCCTGCGCAGATCGACGAGGTACTGCGACAATGTCTC
CTTCACAGCCGACCGGTCTATATCGAGGTGCCAATGGATATGGTGCACCA
GTATGTGTCAGATGAAAGACTCGCGCTCGCCGTCAGCACACCCGACCCTG
TTCCCTCCCAGACCCACGATGATGTCGTGGTGCGAATTCTGGAACGTATA
TATGCAGCAAAGCAGCCGATCATTCTCGTCGATGGCGAAATCAGACCCAT
AGGAATCTTGGAAGAGGTCCAGAAGATCATCAATGCCACGAACTTCCCGA
CCTGGACGACCAATTTCGGAAAAGGCCTGGTGGATGATACACGGCCAAAC
TTCCATGGCATCTACCGCGGCAACTATGACCCCACTGAAGTGCAAGACTT
CTACAATGGGGCAGACTTGGTGTTGTGTTTCGGGCCACACTTCAGCTCCA
CCAATTCCTACTTCTATCAGATTATTCCTAAGCCCGAAGTTGCTATTTTG
TTCACCGATACCGAAGTTAAGTTTGGAACGGAGATCATTCGTGACATTCC
CGCCAAGCTTACCACGTCTCGCCTCATCGAGACGATCGACCTCAACCGAA
TTCATCGCTATGACCCCTACCCTAGTTTGCCCCGTGACGAACTCGTTCCA
TTCTCCGAAGTAGAAGGAGATAAACCACTTTCCCAAGATAAATTGTGGCG
AGTGTTTGCGAACTTCCTTCGTCCAGGCGACATCCTACTGGGAGAAACAG
GCACGGCAGGATATGGTGTCCGCGAGATGGCGTTTCCCAAGCACACCCGC
CTTTTCGCACCCGTGACCTGGCTATCTATCGGGTATATGCTACCAGGAGC
ACAGGGAGCCGCACTTGCGCAAGAAGAATTGATGGCATCAGACAACTACC
ACGGCATTAAAGATGCGCGCACAGTCCTTCTCATCGGCGATGGCAGTTTT
CAAATGACCGCGCAGGAATTATCAACAATCATTCGACTCAAGCTGAACGT
CGTGGTCTTCCTCATCAATAACGACGGATACACGATCGAGCGCTGCATCC
ATGGCCGGAAACAGGGATACAACGATGTGTCGCGATGGAGATATCTACAG
GCCCCCAGCTTCTTTGGAGCGAGTGAAGACACGTTCACTGCCTCAGTTAG
AACCTGGAAGGAGCTACAGGATGTTTTCTCGAATGATGTTGTCAGTAACG
GGAAAGAGCTGCGGATGGTTGAGATAATGCTAGACCGTGAGGACGCTCCT
ATTGGACCTTTGTCGATGCTTATAGATCAGCAAAGACGTACCGGCGCTTA
GGTAGAGTGGATACATGAAGATCAATACATGCACAAATGTCGAAGTTATT
TTGGCAGTGGTATTATCGAAGAGGACAGTATCTAAACCCCTTCTTGTTCG
CTACACATAAACTTGCCCATCATGCCCGCACATCTCATGACTGCAAAATC
CACACGCCATTTTATTAGATACCCTTTGGTTCCCAAAATTCCAAATAGAC
CCTTGATATATCATAACCTCACCCACCACAGTAC
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Coding sequence (CDS) from alignment at ch1:385007..387190+

>KJC3_000258-T1 ID=KJC3_000258-T1|Name=KJC3_000258-T1|organism=Aspergillus niger KJC3|type=CDS|length=1719bp|location=Sequence derived from alignment at ch1:385007..387190+ (Aspergillus niger KJC3)
ATGCCTTCAATCAAAGTTGCTGAGTACCTCTTCCGTCGGCTCAAAGACCT
GGGCGTAGCTTCCGTCCACGGTGTGCCGGGCGATTTTAACCTCACTTTGC
TCGACTATGTGGAGCCCGCCGGTTTGCGATGGGTCGGTAACGCGAACGAG
CTAAACGCCGCCTACGCCGCCGACGGGTACGCCCGAATCAAAGGCATTGG
CGCGGTTGTCACCACCTTCGGTGTTGGGGAGCTGTCTGCTGTGAACGCGA
TCGCTGGAGCCTACACTGAACGTGCGCCCGTCGTGCACATTGTGGGAACA
CCAGCCCGGGATTTGCAGGAGGGACGGAAATTGGTCCACCATACCTTCAA
TGATGGCGAATATGGGCGGTTTGCTAAGATCTACGAACACTTGACTATCG
CTCAGGCCAGCCTGCGAGATCCACGAACCGCGCCTGCGCAGATCGACGAG
GTACTGCGACAATGTCTCCTTCACAGCCGACCGGTCTATATCGAGGTGCC
AATGGATATGGTGCACCAGTATGTGTCAGATGAAAGACTCGCGCTCGCCG
TCAGCACACCCGACCCTGTTCCCTCCCAGACCCACGATGATGTCGTGGTG
CGAATTCTGGAACGTATATATGCAGCAAAGCAGCCGATCATTCTCGTCGA
TGGCGAAATCAGACCCATAGGAATCTTGGAAGAGGTCCAGAAGATCATCA
ATGCCACGAACTTCCCGACCTGGACGACCAATTTCGGAAAAGGCCTGGTG
GATGATACACGGCCAAACTTCCATGGCATCTACCGCGGCAACTATGACCC
CACTGAAGTGCAAGACTTCTACAATGGGGCAGACTTGGTGTTGTGTTTCG
GGCCACACTTCAGCTCCACCAATTCCTACTTCTATCAGATTATTCCTAAG
CCCGAAGTTGCTATTTTGTTCACCGATACCGAAGTTAAGTTTGGAACGGA
GATCATTCGTGACATTCCCGCCAAGCTTACCACGTCTCGCCTCATCGAGA
CGATCGACCTCAACCGAATTCATCGCTATGACCCCTACCCTAGTTTGCCC
CGTGACGAACTCGTTCCATTCTCCGAAGTAGAAGGAGATAAACCACTTTC
CCAAGATAAATTGTGGCGAGTGTTTGCGAACTTCCTTCGTCCAGGCGACA
TCCTACTGGGAGAAACAGGCACGGCAGGATATGGTGTCCGCGAGATGGCG
TTTCCCAAGCACACCCGCCTTTTCGCACCCGTGACCTGGCTATCTATCGG
GTATATGCTACCAGGAGCACAGGGAGCCGCACTTGCGCAAGAAGAATTGA
TGGCATCAGACAACTACCACGGCATTAAAGATGCGCGCACAGTCCTTCTC
ATCGGCGATGGCAGTTTTCAAATGACCGCGCAGGAATTATCAACAATCAT
TCGACTCAAGCTGAACGTCGTGGTCTTCCTCATCAATAACGACGGATACA
CGATCGAGCGCTGCATCCATGGCCGGAAACAGGGATACAACGATGTGTCG
CGATGGAGATATCTACAGGCCCCCAGCTTCTTTGGAGCGAGTGAAGACAC
GTTCACTGCCTCAGTTAGAACCTGGAAGGAGCTACAGGATGTTTTCTCGA
ATGATGTTGTCAGTAACGGGAAAGAGCTGCGGATGGTTGAGATAATGCTA
GACCGTGAGGACGCTCCTATTGGACCTTTGTCGATGCTTATAGATCAGCA
AAGACGTACCGGCGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0003824catalytic activity
GO:0016831carboxy-lyase activity
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000258KJC3_000258Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000258-T1.utr5p1KJC3_000258-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000258-T1.exon1KJC3_000258-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000258-T1.cdsKJC3_000258-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000258-T1.utr3p1KJC3_000258-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000258-T1KJC3_000258-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR012000
DBxrefInterPro:IPR011766
DBxrefInterPro:IPR012110
DBxrefInterPro:IPR012001
DBxrefPFAM:PF02776
DBxrefPFAM:PF00205
DBxrefPFAM:PF02775
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:385007..387190 +
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