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KJC3_000259-T1, KJC3_000259-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000259-T1
Unique NameKJC3_000259-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:387969..389035-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000259-T1 ID=KJC3_000259-T1|Name=KJC3_000259-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1067bp|location=Sequence derived from alignment at ch1:387969..389035- (Aspergillus niger KJC3)
CTTGATTCAACCGTCTGTCATATCTCTACGGGCTACTCACTATCGTTTTT
TGCAGACTTACACTTCACACACGCACAATCACACATTAACAAATATGGGT
GACTTGGGTCCATATCTCGAATACGATGGTGAGGACTATATATGTTCTAT
ATGCGACAGGTATTTCAGGACTGATGGTGCACTTTTCGCCCACTGCAGAG
CGACTACACGACATGAATGGTGTGAGAGATGTCGTCGGGTATTTATATCA
GAGGCCTCGAAAAATGCACATATTCAAGCATCCAACAAACATCATATTTG
TCGTTCCTGTCGTGAAGCAACAGACTTTGAATCCAATCAAGATCTTCGAG
ACCATCTAGTGGGTTATCATCATGCTTGTCTCGAATGCAATATTTTCCTC
GAGTCTGCTGAAGGTCTCCGAAGCCATGATATCTCTGACCACTGTCTTTG
CGATGTGTGCGACAAGTATTTCAGCAATGAAAACAATCTGAGAATGGTAA
GCTGACCAACATGATGGTTGTTGTATGAAGGTTTCTCATACTTTTCTTCT
TTCTAGCATCGGCAGAAGCACCAAGCCAAGACGTTGGAATGTTATGGCTG
CTATCACAACTTCAAGTCATTTTCCGGGATGTTGATTCATCTGGAATCCG
GGGCGTGTCAATAGGGGGTTACTGAAGACACGATTGATGATTTAGCAAAA
GAGTGCTATCAGAGCAGGAGATATACTGTTGAGACAGATGGAGGTTGGCG
ATATGAGTGTCCAGAATGTGAGAAGGAATTCACGAAGCTATCTGCGCTGT
ACCAGCATGTTGAGGATGTCCCTGCCTGCTCCCATCTTGCGAATGGAAAT
GGTTGTCTGGCTAAGCTCGAACGTTTCATGGCTTCCAGGTTATGATAGCT
GACATGCTAACTTTCTTGTATGCGGAGGTTCACTTTTTATTTCGGCTGGA
GACAAATTATGCTCATTTGCGTGATTTGATCCTTCAGGTGAACACGGTAC
CATATCATCGGTTAATTTCAGGTGCATAGAAGTCACAAGGGCCCCGTGTT
AACGACTGTTCCTCCTG
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Coding sequence (CDS) from alignment at ch1:387969..389035-

>KJC3_000259-T1 ID=KJC3_000259-T1|Name=KJC3_000259-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch1:387969..389035- (Aspergillus niger KJC3)
CATCGGCAGAAGCACCAAGCCAAGACGTTGGAATGTTATGGCTGCTATCA
CAACTTCAAGTCATTTTCCGGGATGTTGATTCATCTGGAATCCGGGGCGT
GTCAATAGCCATGATATCTCTGACCACTGTCTTTGCGATGTGTGCGACAA
GTATTTCAGCAATGAAAACAATCTGAGAATGAGCGACTACACGACATGAA
TGGTGTGAGAGATGTCGTCGGGTATTTATATCAGAGGCCTCGAAAAATGC
ACATATTCAAGCATCCAACAAACATCATATTTGTCGTTCCTGTCGTGAAG
CAACAGACTTTGAATCCAATCAAGATCTTCGAGACCATCTAATGGGTGAC
TTGGGTCCATATCTCGAATACGATGCATCGGCAGAAGCACCAAGCCAAGA
CGTTGGAATGTTATGGCTGCTATCACAACTTCAAGTCATTTTCCGGGATG
TTGATTCATCTGGAATCCGGGGCGTGTCAATAGCCATGATATCTCTGACC
ACTGTCTTTGCGATGTGTGCGACAAGTATTTCAGCAATGAAAACAATCTG
AGAATGAGCGACTACACGACATGAATGGTGTGAGAGATGTCGTCGGGTAT
TTATATCAGAGGCCTCGAAAAATGCACATATTCAAGCATCCAACAAACAT
CATATTTGTCGTTCCTGTCGTGAAGCAACAGACTTTGAATCCAATCAAGA
TCTTCGAGACCATCTAATGGGTGACTTGGGTCCATATCTCGAATACGATG
CATCGGCAGAAGCACCAAGCCAAGACGTTGGAATGTTATGGCTGCTATCA
CAACTTCAAGTCATTTTCCGGGATGTTGATTCATCTGGAATCCGGGGCGT
GTCAATAGCCATGATATCTCTGACCACTGTCTTTGCGATGTGTGCGACAA
GTATTTCAGCAATGAAAACAATCTGAGAATGAGCGACTACACGACATGAA
TGGTGTGAGAGATGTCGTCGGGTATTTATATCAGAGGCCTCGAAAAATGC
ACATATTCAAGCATCCAACAAACATCATATTTGTCGTTCCTGTCGTGAAG
CAACAGACTTTGAATCCAATCAAGATCTTCGAGACCATCTAATGGGTGAC
TTGGGTCCATATCTCGAATACGATGCATCGGCAGAAGCACCAAGCCAAGA
CGTTGGAATGTTATGGCTGCTATCACAACTTCAAGTCATTTTCCGGGATG
TTGATTCATCTGGAATCCGGGGCGTGTCAATAGCCATGATATCTCTGACC
ACTGTCTTTGCGATGTGTGCGACAAGTATTTCAGCAATGAAAACAATCTG
AGAATGAGCGACTACACGACATGAATGGTGTGAGAGATGTCGTCGGGTAT
TTATATCAGAGGCCTCGAAAAATGCACATATTCAAGCATCCAACAAACAT
CATATTTGTCGTTCCTGTCGTGAAGCAACAGACTTTGAATCCAATCAAGA
TCTTCGAGACCATCTAATGGGTGACTTGGGTCCATATCTCGAATACGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000259KJC3_000259Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000259-T1KJC3_000259-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000259-T1.cdsKJC3_000259-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000259-T1.utr3p1KJC3_000259-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000259-T1.exon4KJC3_000259-T1.exon4Aspergillus niger KJC3exon
KJC3_000259-T1.exon3KJC3_000259-T1.exon3Aspergillus niger KJC3exon
KJC3_000259-T1.exon2KJC3_000259-T1.exon2Aspergillus niger KJC3exon
KJC3_000259-T1.exon1KJC3_000259-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000259-T1.utr5p1KJC3_000259-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:387969..389035 -
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