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KJC3_000271-T1, KJC3_000271-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000271-T1
Unique NameKJC3_000271-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:408702..410254-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000271-T1 ID=KJC3_000271-T1|Name=KJC3_000271-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1553bp|location=Sequence derived from alignment at ch1:408702..410254- (Aspergillus niger KJC3)
GTACCAGGCAAGCATGTCAGAATCAAAGTGTCAAGTCTACAGGGCAATGG
CTAGAATGTCCCCTGTTTATTCAGGCCAAGATGGTCCTGAAGCGACCTGA
AATGCAACCCTGTTTTCCTTTTCGCCCCCGGCCATGGCATCGCGGTGACA
CTATCCTGATATCATACTTACGCGCGAAGTCAATTAGCTAGCTCTGCAAC
CTTAATATCCTCCGCCAACGCACCTCTCAACAACATTTCTATCGCTAGTC
AAAACCTCAGAAACATAACAATTTTGAACAGAAACAAAGAATAAAAATGC
AGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGATCTC
ACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGGTCAGT
TTTCTGCCACAGTATATCCAGATAGCAACTAATTCGGGCTTGCAGGTACG
AGATTGCCCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAAC
CGCAAAGAAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGC
CGGCGAGAATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGA
ATGAAATCAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTA
GATCTTGTGCGTTCCCCACACAATATCCCTCGAAGCTGTCAAAACTGACA
TGGGCGGCAGCTTATTCTCTCGGCTGGAATCAACGTCAACCAATACGGTG
AAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGGCCAA
TTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCAAGTT
ACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAGCATC
GCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAACAAC
CCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCATTAT
TCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAACAATG
ACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTAAGTTATATTCCC
ACTGTCCCTTTCTCGAGACAGCCGTGCTAACACGATGCTCAGGTAAACAC
AGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTGGGCAAGC
TTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCACGGCTCC
TTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGAAGGGTTG
GAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAGTCTGCGC
AGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAGTCACCGG
ATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGAATGCCAG
TGCTTGAGGCAGACACGACTTTTAGCGATTAATTGTACGTTATGATAATG
ATGTTGTATATCAGCTTCTAGAATGTAGCTCAATATTGCAAGTTTCTTTC
GAT
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Coding sequence (CDS) from alignment at ch1:408702..410254-

>KJC3_000271-T1 ID=KJC3_000271-T1|Name=KJC3_000271-T1|organism=Aspergillus niger KJC3|type=CDS|length=3996bp|location=Sequence derived from alignment at ch1:408702..410254- (Aspergillus niger KJC3)
GTAAACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTT
GGGCAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGC
ACGGCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAG
AAGGGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGA
GTCTGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCA
GTCACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGG
AATGCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATA
CGGTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGG
GCCAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCC
AAGTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCA
GCATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCA
ACAACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCC
ATTATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAA
CAATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATT
GCCCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAA
AGAAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCG
AGAATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAA
ATCAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCT
TATGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATG
ATCTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGG
TAAACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTG
GGCAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCA
CGGCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGA
AGGGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAG
TCTGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAG
TCACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGA
ATGCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATAC
GGTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGG
CCAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCA
AGTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAG
CATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAA
CAACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCA
TTATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAAC
AATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATTG
CCCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAAA
GAAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCGA
GAATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAAA
TCAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCTT
ATGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGA
TCTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGGT
AAACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTGG
GCAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCAC
GGCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGAA
GGGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAGT
CTGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAGT
CACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGAA
TGCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATACG
GTGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGGC
CAATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCAA
GTTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAGC
ATCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAAC
AACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCAT
TATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAACA
ATGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATTGC
CCGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAAAG
AAGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCGAG
AATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAAAT
CAAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCTTA
TGCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGAT
CTCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGGGTA
AACACAGCAATGCAACAACAATGGAAGGACGCATATCCCGGCCTCTTGGG
CAAGCTTCTAACCACAGTAATGCTGGCAGCCGGTCGAACACCCGAGCACG
GCTCCTTCAGCGCACTGTATGCGGCGACAAGTCCCGAAGTTGAAGAGAAG
GGTTGGAACGGATACTACTTCAGTGACCCTGCACAGCCCGGAAAGGAGTC
TGCGCAGGCGTCAGATCCTTCGTTGGGTGCTGCATTATGGGACCTCAGTC
ACCGGATCATCAAGGAGAAGGTTGGCGATGATGCCATTGTCGACTGGAAT
GCCAGTGCTTGACTTATTCTCTCGGCTGGAATCAACGTCAACCAATACGG
TGAAACACACGACCACATCGATCGCCATTTCGAAGTCAACTGGCTGGGCC
AATTCTATGTCGTGAACCTGGTCTACCCGTTGCTGAGAAAGACGTCCAAG
TTACCGAATACCCCTGCGCCCAGAATCGTCTTCGAGACCTCAGAGCAGCA
TCGCATGGCGCCTAAGAATGTTCATTTCGCTACGCTAGAGGAGATCAACA
ACCCCGAGGTCGGCAACCTGGAGCTTTACGGTCGGACGAAGTTGGCCATT
ATTCTTGGCGTGAAGTACGGACTGTTGGATCGGGTAATCAAGCCTAACAA
TGACAACATCTACGCGCTGTCTGTGCATCCAGGCGCTGTACGAGATTGCC
CGCGCGTTCGTTCTCAATGGCGCCAAGGTATACATGACCAACCGCAAAGA
AGAACAAGGCCAAGCTGCGATCGAACAAATCAAGAAAGAAGCCGGCGAGA
ATGCGCAGATCGAGTGGTTCCCCTGCGACATGGGGAACTTGAATGAAATC
AAGGAAGTGTTTGAAGACTTCCGGAAGAAGGAAGATCGACTAGATCTTAT
GCAGTCCATTCTACAACCCATCCTCGGTCCTCATAAGGAGATCCATGATC
TCACTGGCCGTGTCGCCCTCATCACTGGCGGTGCACTAGGCATAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000271KJC3_000271Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000271-T1KJC3_000271-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000271-T1.cdsKJC3_000271-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000271-T1.utr3p1KJC3_000271-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000271-T1.exon4KJC3_000271-T1.exon4Aspergillus niger KJC3exon
KJC3_000271-T1.exon3KJC3_000271-T1.exon3Aspergillus niger KJC3exon
KJC3_000271-T1.exon2KJC3_000271-T1.exon2Aspergillus niger KJC3exon
KJC3_000271-T1.exon1KJC3_000271-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000271-T1.utr5p1KJC3_000271-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:408702..410254 -
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