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KJC3_000272-T1, KJC3_000272-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000272-T1
Unique NameKJC3_000272-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:410590..411621+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000272-T1 ID=KJC3_000272-T1|Name=KJC3_000272-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1032bp|location=Sequence derived from alignment at ch1:410590..411621+ (Aspergillus niger KJC3)
ATGTTCTCCAGCGCCCCTCCTCCCCAAAATCGTCGCCTGAAAGTCACCGC
AGGAACATCCTACGCACCAGAAACCCACGAAACCGTCACCGTAAATAGTA
CCTCTCCTCTGAAATTTAAGAGCGACCACTTAGCCAGTAACCTCTGGGTC
CGCATCAAAGATTATACAGGTATCTACACCCTCACCTCTAACCCGTCACC
ACTCACCCAATTATCCTAACAAACACAGGCTACCCCACCGATTCCCCTAA
AACAAACACCTACTTCGACACACCTCCATTCAGCCAAAACCTCTTCTCCC
TCACCTTCACCCTCAATTTCACCCACGACGTAAACGGCAACGACCTCATC
TTCGGGAATGACTTCGACCACCCGATCCGCTCATACCTCCCAACCGGATT
CAATACCGCGTTAAAGATCGTCAAGTCCACGCTCGACCCCTCGTTGGATG
GCGACGCATATGCCGATAAGCCATATCTATATAGCCCTGGACTAGCATCA
TGGAACCAGTTCGCGATTGGCGATAGGGACGAGGGGGCTGAGAACAATGA
GAATATCATAGTGCAAGAAGGCGGCACAGGATCCGGGGTGGAGGTTCGGA
AAGGGTACAATATACCCGATAGCTCGTCATCACGGAGAACGCATTTCCAG
GGAGAGGCGAAACGACAGGAGTTTGTCTTTGAGAAGGGGAGGACTTATGC
TGCGGATTTTGGTAATGGGTACTTGGATTTTAATGGTACGATATCCGCGT
TACTCCATTTATAGTCGGGTTATTTGGGGTGATCTTCGAAGCTAATACGC
AACAGAATTCGCGATTCGGATACCCGGGTTCAGCTTCCATATTGGCAAAT
ATGTCAGTGAGAAGAATAATGTATTGCGCTACGTCTTGAAAAATCGCGCG
ACGGGGGAGGTCTATTTGGTGATTTGTTTGACGGTTGTGCTGGAAGAAGA
GGCAGGCGATAATAGTGACGAGGGCGAGGGGGACGATATGATAGACGTAG
AAGACGAACAAGAGGTAGATGATGTGGACTAG
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Coding sequence (CDS) from alignment at ch1:410590..411621+

>KJC3_000272-T1 ID=KJC3_000272-T1|Name=KJC3_000272-T1|organism=Aspergillus niger KJC3|type=CDS|length=2709bp|location=Sequence derived from alignment at ch1:410590..411621+ (Aspergillus niger KJC3)
ATGTTCTCCAGCGCCCCTCCTCCCCAAAATCGTCGCCTGAAAGTCACCGC
AGGAACATCCTACGCACCAGAAACCCACGAAACCGTCACCGTAAATAGTA
CCTCTCCTCTGAAATTTAAGAGCGACCACTTAGCCAGTAACCTCTGGGTC
CGCATCAAAGATTATACAGGCTACCCCACCGATTCCCCTAAAACAAACAC
CTACTTCGACACACCTCCATTCAGCCAAAACCTCTTCTCCCTCACCTTCA
CCCTCAATTTCACCCACGACGTAAACGGCAACGACCTCATCTTCGGGAAT
GACTTCGACCACCCGATCCGCTCATACCTCCCAACCGGATTCAATACCGC
GTTAAAGATCGTCAAGTCCACGCTCGACCCCTCGTTGGATGGCGACGCAT
ATGCCGATAAGCCATATCTATATAGCCCTGGACTAGCATCATGGAACCAG
TTCGCGATTGGCGATAGGGACGAGGGGGCTGAGAACAATGAGAATATCAT
AGTGCAAGAAGGCGGCACAGGATCCGGGGTGGAGGTTCGGAAAGGGTACA
ATATACCCGATAGCTCGTCATCACGGAGAACGCATTTCCAGGGAGAGGCG
AAACGACAGGAGTTTGTCTTTGAGAAGGGGAGGACTTATGCTGCGGATTT
TGGTAATGGGTACTTGGATTTTAATGAATTCGCGATTCGGATACCCGGGT
TCAGCTTCCATATTGGCAAATATGTCAGTGAGAAGAATAATGTATTGCGC
TACGTCTTGAAAAATCGCGCGACGGGGGAGGTCTATTTGGTGATTTGTTT
GACGGTTGTGCTGGAAGAAGAGGCAGGCGATAATAGTGACGAGGGCGAGG
GGGACGATATGATAGACGTAGAAGACGAACAAGAGGTAGATGATGTGGAC
TAGATGTTCTCCAGCGCCCCTCCTCCCCAAAATCGTCGCCTGAAAGTCAC
CGCAGGAACATCCTACGCACCAGAAACCCACGAAACCGTCACCGTAAATA
GTACCTCTCCTCTGAAATTTAAGAGCGACCACTTAGCCAGTAACCTCTGG
GTCCGCATCAAAGATTATACAGGCTACCCCACCGATTCCCCTAAAACAAA
CACCTACTTCGACACACCTCCATTCAGCCAAAACCTCTTCTCCCTCACCT
TCACCCTCAATTTCACCCACGACGTAAACGGCAACGACCTCATCTTCGGG
AATGACTTCGACCACCCGATCCGCTCATACCTCCCAACCGGATTCAATAC
CGCGTTAAAGATCGTCAAGTCCACGCTCGACCCCTCGTTGGATGGCGACG
CATATGCCGATAAGCCATATCTATATAGCCCTGGACTAGCATCATGGAAC
CAGTTCGCGATTGGCGATAGGGACGAGGGGGCTGAGAACAATGAGAATAT
CATAGTGCAAGAAGGCGGCACAGGATCCGGGGTGGAGGTTCGGAAAGGGT
ACAATATACCCGATAGCTCGTCATCACGGAGAACGCATTTCCAGGGAGAG
GCGAAACGACAGGAGTTTGTCTTTGAGAAGGGGAGGACTTATGCTGCGGA
TTTTGGTAATGGGTACTTGGATTTTAATGAATTCGCGATTCGGATACCCG
GGTTCAGCTTCCATATTGGCAAATATGTCAGTGAGAAGAATAATGTATTG
CGCTACGTCTTGAAAAATCGCGCGACGGGGGAGGTCTATTTGGTGATTTG
TTTGACGGTTGTGCTGGAAGAAGAGGCAGGCGATAATAGTGACGAGGGCG
AGGGGGACGATATGATAGACGTAGAAGACGAACAAGAGGTAGATGATGTG
GACTAGATGTTCTCCAGCGCCCCTCCTCCCCAAAATCGTCGCCTGAAAGT
CACCGCAGGAACATCCTACGCACCAGAAACCCACGAAACCGTCACCGTAA
ATAGTACCTCTCCTCTGAAATTTAAGAGCGACCACTTAGCCAGTAACCTC
TGGGTCCGCATCAAAGATTATACAGGCTACCCCACCGATTCCCCTAAAAC
AAACACCTACTTCGACACACCTCCATTCAGCCAAAACCTCTTCTCCCTCA
CCTTCACCCTCAATTTCACCCACGACGTAAACGGCAACGACCTCATCTTC
GGGAATGACTTCGACCACCCGATCCGCTCATACCTCCCAACCGGATTCAA
TACCGCGTTAAAGATCGTCAAGTCCACGCTCGACCCCTCGTTGGATGGCG
ACGCATATGCCGATAAGCCATATCTATATAGCCCTGGACTAGCATCATGG
AACCAGTTCGCGATTGGCGATAGGGACGAGGGGGCTGAGAACAATGAGAA
TATCATAGTGCAAGAAGGCGGCACAGGATCCGGGGTGGAGGTTCGGAAAG
GGTACAATATACCCGATAGCTCGTCATCACGGAGAACGCATTTCCAGGGA
GAGGCGAAACGACAGGAGTTTGTCTTTGAGAAGGGGAGGACTTATGCTGC
GGATTTTGGTAATGGGTACTTGGATTTTAATGAATTCGCGATTCGGATAC
CCGGGTTCAGCTTCCATATTGGCAAATATGTCAGTGAGAAGAATAATGTA
TTGCGCTACGTCTTGAAAAATCGCGCGACGGGGGAGGTCTATTTGGTGAT
TTGTTTGACGGTTGTGCTGGAAGAAGAGGCAGGCGATAATAGTGACGAGG
GCGAGGGGGACGATATGATAGACGTAGAAGACGAACAAGAGGTAGATGAT
GTGGACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000272KJC3_000272Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000272-T1.exon1KJC3_000272-T1.exon1Aspergillus niger KJC3exon
KJC3_000272-T1.exon2KJC3_000272-T1.exon2Aspergillus niger KJC3exon
KJC3_000272-T1.exon3KJC3_000272-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000272-T1.cdsKJC3_000272-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000272-T1KJC3_000272-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013897
DBxrefPFAM:PF08588
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:410590..411621 +
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