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KJC3_000277-T1, KJC3_000277-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000277-T1
Unique NameKJC3_000277-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:423643..425073+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000277-T1 ID=KJC3_000277-T1|Name=KJC3_000277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1431bp|location=Sequence derived from alignment at ch1:423643..425073+ (Aspergillus niger KJC3)
CAGGCCACCTGTAATTCAGAGATTGCACGCGATATCGGACTGTTTCACTC
AAAGTTTGTCTTTTTGATCGATTTACTGACAGGAGAGGATGAGTTGTCCA
GCGGAGTGCCTCGAGCCGAACCTGTGCGATCGCGGAGAGGGTTCAAAAGG
GGAGGGACACCCCGGATTCCCAGCTATCTAAGCAGTCCAACATCGCCTTC
AATCACTCCTCTCGAACTACTCCAAATCCCTTCATTCCCCTCTTCACAAT
GTCGCCAACTTCTACAGATACTGCCTCCGCTGCAGAGGCTAAGAATGGCA
CCTCCACACCCTTTGTCAACACCATGCCCGACTCGACCTTCAGCTGGCAG
GTCACACTCGCGCAAAAGGTGATCGCCATCACCGGCGCCAACCGCGGCAT
TGGTTTGGGCATTGCGGAAGTGTGTCTCGCCAATTCCGCAAAGTTCGTAT
ATTCAATGGATCTCATGGAGCCTGGAGAGGAGACCATTGCCCTTCAGACC
CGCTACCCGAACTTCCGATATATCCAGACCGACGTGACATCCGAGGAGAG
TATCGAGAAGGCAGTGAATCAGATTGTGGAGGAAACCGGGCGAATTGATG
GGCTGGTGGCTAATGCGGGCATGACCAAACACCAACCGGCGCTCAAGTTT
GAGCGCCCGGAATTGGAGCGCATGTTCAACCTAAATGTGAGTGGACCTTT
TGTTTGGTCGCGTCATGCATGCAGCACGCGGGTGCTTACGGGTGCAGGTT
TTCGGTGCATATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCATGGAGCT
TGGTATTAAGGGGTCCATTGTTATGACTGCTAGTATGACTTCTTATCGTC
CGAATCGCGTAAGTACCTTTTCCCCATAGGGGTGTGAGAGTTGTGCTGAT
TGATTCCCAGGCTGCTCCGTCTGCACCCTATGGCGCTACTAAAGCCGCAG
GTAAGTAATCTTATTCTCTTTGATAGCTTCCGCACTATACTAACTGCATC
CCCATTAGTGCGCAACATGTGTCACACCTTGGCGATGGAGTGGAGCAAGC
ACGGCATCCGCGTGAACAGCATCTCCCCTGGTTTTGTCCGCACCGCGATG
ACCTACTACGTGGAAACCGCCCCGGACTGGGATACAAAGATGGAATACTA
CGGAGGAATGCCTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGCTTACG
TGTATCTGCTCAGCGATAGCAGCTCCTACACCACTGGCATTGACATCCCC
ATTGCAGGCATCGTCGGTGCTTGGTAGTGTGCATGAGGCAGATCAGGCTT
GGTGTGGACTTTCAAGAATCGCATTCAGCCCGCGTTTTAATGGAATCATA
TGTACATACACGACCCTTTCTATTAACAGGATAGACGACGACCCCGAATG
ACAGTGAGGCACGGGCTGTGCTTAAGCCAAG
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Coding sequence (CDS) from alignment at ch1:423643..425073+

>KJC3_000277-T1 ID=KJC3_000277-T1|Name=KJC3_000277-T1|organism=Aspergillus niger KJC3|type=CDS|length=3432bp|location=Sequence derived from alignment at ch1:423643..425073+ (Aspergillus niger KJC3)
ATGTCGCCAACTTCTACAGATACTGCCTCCGCTGCAGAGGCTAAGAATGG
CACCTCCACACCCTTTGTCAACACCATGCCCGACTCGACCTTCAGCTGGC
AGGTCACACTCGCGCAAAAGGTGATCGCCATCACCGGCGCCAACCGCGGC
ATTGGTTTGGGCATTGCGGAAGTGTGTCTCGCCAATTCCGCAAAGTTCGT
ATATTCAATGGATCTCATGGAGCCTGGAGAGGAGACCATTGCCCTTCAGA
CCCGCTACCCGAACTTCCGATATATCCAGACCGACGTGACATCCGAGGAG
AGTATCGAGAAGGCAGTGAATCAGATTGTGGAGGAAACCGGGCGAATTGA
TGGGCTGGTGGCTAATGCGGGCATGACCAAACACCAACCGGCGCTCAAGT
TTGAGCGCCCGGAATTGGAGCGCATGTTCAACCTAAATGTTTTCGGTGCA
TATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCATGGAGCTTGGTATTAA
GGGGTCCATTGTTATGACTGCTAGTATGACTTCTTATCGTCCGAATCGCG
CTGCTCCGTCTGCACCCTATGGCGCTACTAAAGCCGCAGTGCGCAACATG
TGTCACACCTTGGCGATGGAGTGGAGCAAGCACGGCATCCGCGTGAACAG
CATCTCCCCTGGTTTTGTCCGCACCGCGATGACCTACTACGTGGAAACCG
CCCCGGACTGGGATACAAAGATGGAATACTACGGAGGAATGCCTCGTCTG
GCCGACCCTCGAGAGCTGGGAGGTGCTTACGTGTATCTGCTCAGCGATAG
CAGCTCCTACACCACTGGCATTGACATCCCCATTGCAGGCATCGTCGGTG
CTTGGTAGATGTCGCCAACTTCTACAGATACTGCCTCCGCTGCAGAGGCT
AAGAATGGCACCTCCACACCCTTTGTCAACACCATGCCCGACTCGACCTT
CAGCTGGCAGGTCACACTCGCGCAAAAGGTGATCGCCATCACCGGCGCCA
ACCGCGGCATTGGTTTGGGCATTGCGGAAGTGTGTCTCGCCAATTCCGCA
AAGTTCGTATATTCAATGGATCTCATGGAGCCTGGAGAGGAGACCATTGC
CCTTCAGACCCGCTACCCGAACTTCCGATATATCCAGACCGACGTGACAT
CCGAGGAGAGTATCGAGAAGGCAGTGAATCAGATTGTGGAGGAAACCGGG
CGAATTGATGGGCTGGTGGCTAATGCGGGCATGACCAAACACCAACCGGC
GCTCAAGTTTGAGCGCCCGGAATTGGAGCGCATGTTCAACCTAAATGTTT
TCGGTGCATATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCATGGAGCTT
GGTATTAAGGGGTCCATTGTTATGACTGCTAGTATGACTTCTTATCGTCC
GAATCGCGCTGCTCCGTCTGCACCCTATGGCGCTACTAAAGCCGCAGTGC
GCAACATGTGTCACACCTTGGCGATGGAGTGGAGCAAGCACGGCATCCGC
GTGAACAGCATCTCCCCTGGTTTTGTCCGCACCGCGATGACCTACTACGT
GGAAACCGCCCCGGACTGGGATACAAAGATGGAATACTACGGAGGAATGC
CTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGCTTACGTGTATCTGCTC
AGCGATAGCAGCTCCTACACCACTGGCATTGACATCCCCATTGCAGGCAT
CGTCGGTGCTTGGTAGATGTCGCCAACTTCTACAGATACTGCCTCCGCTG
CAGAGGCTAAGAATGGCACCTCCACACCCTTTGTCAACACCATGCCCGAC
TCGACCTTCAGCTGGCAGGTCACACTCGCGCAAAAGGTGATCGCCATCAC
CGGCGCCAACCGCGGCATTGGTTTGGGCATTGCGGAAGTGTGTCTCGCCA
ATTCCGCAAAGTTCGTATATTCAATGGATCTCATGGAGCCTGGAGAGGAG
ACCATTGCCCTTCAGACCCGCTACCCGAACTTCCGATATATCCAGACCGA
CGTGACATCCGAGGAGAGTATCGAGAAGGCAGTGAATCAGATTGTGGAGG
AAACCGGGCGAATTGATGGGCTGGTGGCTAATGCGGGCATGACCAAACAC
CAACCGGCGCTCAAGTTTGAGCGCCCGGAATTGGAGCGCATGTTCAACCT
AAATGTTTTCGGTGCATATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCA
TGGAGCTTGGTATTAAGGGGTCCATTGTTATGACTGCTAGTATGACTTCT
TATCGTCCGAATCGCGCTGCTCCGTCTGCACCCTATGGCGCTACTAAAGC
CGCAGTGCGCAACATGTGTCACACCTTGGCGATGGAGTGGAGCAAGCACG
GCATCCGCGTGAACAGCATCTCCCCTGGTTTTGTCCGCACCGCGATGACC
TACTACGTGGAAACCGCCCCGGACTGGGATACAAAGATGGAATACTACGG
AGGAATGCCTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGCTTACGTGT
ATCTGCTCAGCGATAGCAGCTCCTACACCACTGGCATTGACATCCCCATT
GCAGGCATCGTCGGTGCTTGGTAGATGTCGCCAACTTCTACAGATACTGC
CTCCGCTGCAGAGGCTAAGAATGGCACCTCCACACCCTTTGTCAACACCA
TGCCCGACTCGACCTTCAGCTGGCAGGTCACACTCGCGCAAAAGGTGATC
GCCATCACCGGCGCCAACCGCGGCATTGGTTTGGGCATTGCGGAAGTGTG
TCTCGCCAATTCCGCAAAGTTCGTATATTCAATGGATCTCATGGAGCCTG
GAGAGGAGACCATTGCCCTTCAGACCCGCTACCCGAACTTCCGATATATC
CAGACCGACGTGACATCCGAGGAGAGTATCGAGAAGGCAGTGAATCAGAT
TGTGGAGGAAACCGGGCGAATTGATGGGCTGGTGGCTAATGCGGGCATGA
CCAAACACCAACCGGCGCTCAAGTTTGAGCGCCCGGAATTGGAGCGCATG
TTCAACCTAAATGTTTTCGGTGCATATTTCTGCGCCCAGATTGTCGCTCG
CAAGTTCATGGAGCTTGGTATTAAGGGGTCCATTGTTATGACTGCTAGTA
TGACTTCTTATCGTCCGAATCGCGCTGCTCCGTCTGCACCCTATGGCGCT
ACTAAAGCCGCAGTGCGCAACATGTGTCACACCTTGGCGATGGAGTGGAG
CAAGCACGGCATCCGCGTGAACAGCATCTCCCCTGGTTTTGTCCGCACCG
CGATGACCTACTACGTGGAAACCGCCCCGGACTGGGATACAAAGATGGAA
TACTACGGAGGAATGCCTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGC
TTACGTGTATCTGCTCAGCGATAGCAGCTCCTACACCACTGGCATTGACA
TCCCCATTGCAGGCATCGTCGGTGCTTGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000277KJC3_000277Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000277-T1KJC3_000277-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000277-T1.utr5p1KJC3_000277-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000277-T1.exon1KJC3_000277-T1.exon1Aspergillus niger KJC3exon
KJC3_000277-T1.exon2KJC3_000277-T1.exon2Aspergillus niger KJC3exon
KJC3_000277-T1.exon3KJC3_000277-T1.exon3Aspergillus niger KJC3exon
KJC3_000277-T1.exon4KJC3_000277-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000277-T1.cdsKJC3_000277-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000277-T1.utr3p1KJC3_000277-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:423643..425073 +
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