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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:438479..439354+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000284-T1 ID=KJC3_000284-T1|Name=KJC3_000284-T1|organism=Aspergillus niger KJC3|type=mRNA|length=876bp|location=Sequence derived from alignment at ch1:438479..439354+ (Aspergillus niger KJC3)
AACTTTTCGAACCCTATTTTAAGGGGCACCTAAAACGTAGAATATCTGTT
GCCAATTCAGTGAGTCCACATTCAGCAAATGCAAGGGTATCGTTTCGATG
ATTCATCCTTGGACCAAGAATACACTTCCAAAGGCATTATGTCTTCCGTA
TCCATAAGATATATCTCCAGTATCTTGTTTTCATTCAGGTTAATCCACTC
TCATCACCTCTCAAAGCAAAGGCACTACGTCAACTTTCTAATCACTCCTC
GCTATGACGGGCTCGATCCCCTTTGTAGGAGCATTTGCTCCACGGTCTCC
AGGAAAGCCTTATGCTTCGACAGCGGACATGGTTATGGAAATGAATATGC
TCACGGAATCCATGAAGAATATTGCCACCCAAATTGAACAGTACCAGGGT
GGTATGAGCAATCTGCTTTACTTGACTCGAGGCACCTATAAGGTCTACGA
TAGCGCCATGAATGCACGGAAAAGAATCGCATCTACCGAGGTCACGGGCG
GTCGGGACGAGGAAGACAAAGTCTTGACTGCTACATACGAAATGATCAAC
GCCCTGACTCAAGCTATTGTGGCTACTTCAAGCAAGGTATACTGCCTGGA
GGGCTTCATTTATCATGACGAATGCTAATATAAGTAGACGATCTTCGTGA
AGAAGATCCCTAGCGGATCATCAATCGTCCAAGCTGTTTTGTGCAAAATG
CATGATGCGAAGGAAGGACTGCAGGCAGCACTTCTCAGGCACTGCCCGAA
TGGATTCACGCCGGGAATATTGGAACAGTTCTGTGATTTTGACCAGAGGT
ACACAGATCTGATGTCAGATCTCAGAGCTTAGCAGATGTGATTCAATACA
GAGCAAATACAATTGGAATTCCTCAT back to topCoding sequence (CDS) from alignment at ch1:438479..439354+ >KJC3_000284-T1 ID=KJC3_000284-T1|Name=KJC3_000284-T1|organism=Aspergillus niger KJC3|type=CDS|length=1056bp|location=Sequence derived from alignment at ch1:438479..439354+ (Aspergillus niger KJC3)
ATGACGGGCTCGATCCCCTTTGTAGGAGCATTTGCTCCACGGTCTCCAGG
AAAGCCTTATGCTTCGACAGCGGACATGGTTATGGAAATGAATATGCTCA
CGGAATCCATGAAGAATATTGCCACCCAAATTGAACAGTACCAGGGTGGT
ATGAGCAATCTGCTTTACTTGACTCGAGGCACCTATAAGGTCTACGATAG
CGCCATGAATGCACGGAAAAGAATCGCATCTACCGAGGTCACGGGCGGTC
GGGACGAGGAAGACAAAGTCTTGACTGCTACATACGAAATGATCAACGCC
CTGACTCAAGCTATTGTGGCTACTTCAAGCAAGACGATCTTCGTGAAGAA
GATCCCTAGCGGATCATCAATCGTCCAAGCTGTTTTGTGCAAAATGCATG
ATGCGAAGGAAGGACTGCAGGCAGCACTTCTCAGGCACTGCCCGAATGGA
TTCACGCCGGGAATATTGGAACAGTTCTGTGATTTTGACCAGAGGTACAC
AGATCTGATGTCAGATCTCAGAGCTTAGATGACGGGCTCGATCCCCTTTG
TAGGAGCATTTGCTCCACGGTCTCCAGGAAAGCCTTATGCTTCGACAGCG
GACATGGTTATGGAAATGAATATGCTCACGGAATCCATGAAGAATATTGC
CACCCAAATTGAACAGTACCAGGGTGGTATGAGCAATCTGCTTTACTTGA
CTCGAGGCACCTATAAGGTCTACGATAGCGCCATGAATGCACGGAAAAGA
ATCGCATCTACCGAGGTCACGGGCGGTCGGGACGAGGAAGACAAAGTCTT
GACTGCTACATACGAAATGATCAACGCCCTGACTCAAGCTATTGTGGCTA
CTTCAAGCAAGACGATCTTCGTGAAGAAGATCCCTAGCGGATCATCAATC
GTCCAAGCTGTTTTGTGCAAAATGCATGATGCGAAGGAAGGACTGCAGGC
AGCACTTCTCAGGCACTGCCCGAATGGATTCACGCCGGGAATATTGGAAC
AGTTCTGTGATTTTGACCAGAGGTACACAGATCTGATGTCAGATCTCAGA
GCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000284-T1.utr5p1 | KJC3_000284-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000284-T1.utr3p1 | KJC3_000284-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:438479..439354 + |
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