You are here

Home

KJC3_000296-T1, KJC3_000296-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000296-T1
Unique NameKJC3_000296-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:473336..474942-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000296-T1 ID=KJC3_000296-T1|Name=KJC3_000296-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1607bp|location=Sequence derived from alignment at ch1:473336..474942- (Aspergillus niger KJC3)
GCTGGGAACATCACATTACGTCGCCCGGTGGATCGATTGGTTCGGCAAGC
CAATCTGAGCAACCGTGTATTGCCTTCTTGGTGAATAGTGTGCAATAGGA
GTGTCACATGGCTGCGATGCAGATAAAATGAGCTACTCCAGGCGAGTGTA
CATGTTAATATGCAGTGCAACAAGCCGTGATATATAACGACGTGTTTGTG
CCTGCCGCAAGCAAGCCATCCTGCATTTTCAATATCCGGTCTTGTCCTTG
CTTCCATCCGAGGTTCTATCCGAATCATGTCTGAAAACCACGCGATAGTG
TTTGGTGAGTATCTGACTAGTAACTATTCTTAACTACCACCGAAATTCAC
TAATATACGGGCCTAGGCGCCAGTGGAGTCAATGGTTGGGCTGTGGTGAA
CGCTCTATTGCAAGGATATCCATCCGAGGATGCCTTTGCATCTGTCACAG
CATTGACAAACAGACCAGTTAGCTTGCAAGACACACTATGGCCAAAATCA
CCCAAGCTAGATCTCGTCAGCGGAATCGATCTGCTCGCCGACGCAAAACT
AGAGACCTTAGAGGATGAATTGAAAAGGAAGGTGGCAAACGCCGACAAAA
TAACCCATGTCTACTTTTTTGGTGCGTACTCCCTTATCAGTAACCACCTT
GCGAGCGCTAATCCATTTAGCGTATATTATGGATGCCGATCCGAAGGCGG
AGGTACATAAAAATACAGAGCTAGTGAAACGAAGCGTGCTTGCCATCCAG
AATGTTTCGTCCCACCTCAAGTTCGTTGTTCTTGGGACTGGGGCCAAATC
ATATGGATCTCACCTTCTGGAGCAGTTCCCATTCCGCGATCAGGTTCCGC
TCAAAGAGTCACTACCGCGAATGCCCGAACCATTCGCATCGCAGATATTC
TATTATCACCAAGTCGACCAGCTGTCTTGGATTTCTCAGGGAAAAAGTTG
GTCCTTCTGCGAGCTGATGCCTGACCTGGTTGTCGGCTTCGTACCTAACA
ACAATTATTATTGCATGGCCCAGATACTTGCTACATATTTGGCTCTCTAC
GCCAAGATAAATGGCAAAGGTAGTGAAGTGGTCTTTCCAGGGACACAACG
GTCATGGGAATGTTTGTCACAGGACAGCAGCCAGGATGTCATAGCAAAGA
CGGCCATATATGCATCCCTCCACCCACAAGAAACTGCAGGACAACGGTAC
AATGTGACAGACAGCGCTAGACCGGCATCTTGGAGTGAGAAGTGGCCAGT
AATTTGCGAGTACTTCGGGTTAAGGGGCACAGGCCCTCGTGATGGTGTTG
CCGGGCCTGTGCCGAACGAGTACCTAGTTGAGCACTACAATGAGTGGAGG
GAACTGGAGAAAGAAGAGGGCCTTAAGACGGGAAGAGTTGGCAACAACAA
GAGCTACGGCGATTTTGCGCGTGTTATGATGACCTTATGTGATTTAGATC
GACAGCTAGATATGAGCAAAACTCATGCGATGATGGGCAGTGCTAAGGTC
GAGACGGACAGCAGAGGAGCTTGGTGGACGGCATTCGATCGCTTCCGCCG
CGCAAAGATTATTCCATGAGTAACGCGCGGATGTACCTACGTTTATTTAG
TATTTGG
back to top

Coding sequence (CDS) from alignment at ch1:473336..474942-

>KJC3_000296-T1 ID=KJC3_000296-T1|Name=KJC3_000296-T1|organism=Aspergillus niger KJC3|type=CDS|length=3546bp|location=Sequence derived from alignment at ch1:473336..474942- (Aspergillus niger KJC3)
CGTATATTATGGATGCCGATCCGAAGGCGGAGGTACATAAAAATACAGAG
CTAGTGAAACGAAGCGTGCTTGCCATCCAGAATGTTTCGTCCCACCTCAA
GTTCGTTGTTCTTGGGACTGGGGCCAAATCATATGGATCTCACCTTCTGG
AGCAGTTCCCATTCCGCGATCAGGTTCCGCTCAAAGAGTCACTACCGCGA
ATGCCCGAACCATTCGCATCGCAGATATTCTATTATCACCAAGTCGACCA
GCTGTCTTGGATTTCTCAGGGAAAAAGTTGGTCCTTCTGCGAGCTGATGC
CTGACCTGGTTGTCGGCTTCGTACCTAACAACAATTATTATTGCATGGCC
CAGATACTTGCTACATATTTGGCTCTCTACGCCAAGATAAATGGCAAAGG
TAGTGAAGTGGTCTTTCCAGGGACACAACGGTCATGGGAATGTTTGTCAC
AGGACAGCAGCCAGGATGTCATAGCAAAGACGGCCATATATGCATCCCTC
CACCCACAAGAAACTGCAGGACAACGGTACAATGTGACAGACAGCGCTAG
ACCGGCATCTTGGAGTGAGAAGTGGCCAGTAATTTGCGAGTACTTCGGGT
TAAGGGGCACAGGCCCTCGTGATGGTGTTGCCGGGCCTGTGCCGAACGAG
TACCTAGTTGAGCACTACAATGAGTGGAGGGAACTGGAGAAAGAAGAGGG
CCTTAAGACGGGAAGAGTTGGCAACAACAAGAGCTACGGCGATTTTGCGC
GTGTTATGATGACCTTATGTGATTTAGATCGACAGCTAGATATGAGCAAA
ACTCATGCGATGATGGGCAGTGCTAAGGTCGAGACGGACAGCAGAGGAGC
TTGGTGGACGGCATTCGATCGCTTCCGCCGCGCAAAGATTATTCCATGAG
CGCCAGTGGAGTCAATGGTTGGGCTGTGGTGAACGCTCTATTGCAAGGAT
ATCCATCCGAGGATGCCTTTGCATCTGTCACAGCATTGACAAACAGACCA
GTTAGCTTGCAAGACACACTATGGCCAAAATCACCCAAGCTAGATCTCGT
CAGCGGAATCGATCTGCTCGCCGACGCAAAACTAGAGACCTTAGAGGATG
AATTGAAAAGGAAGGTGGCAAACGCCGACAAAATAACCCATGTCTACTTT
TTTGATGTCTGAAAACCACGCGATAGTGTTTGCGTATATTATGGATGCCG
ATCCGAAGGCGGAGGTACATAAAAATACAGAGCTAGTGAAACGAAGCGTG
CTTGCCATCCAGAATGTTTCGTCCCACCTCAAGTTCGTTGTTCTTGGGAC
TGGGGCCAAATCATATGGATCTCACCTTCTGGAGCAGTTCCCATTCCGCG
ATCAGGTTCCGCTCAAAGAGTCACTACCGCGAATGCCCGAACCATTCGCA
TCGCAGATATTCTATTATCACCAAGTCGACCAGCTGTCTTGGATTTCTCA
GGGAAAAAGTTGGTCCTTCTGCGAGCTGATGCCTGACCTGGTTGTCGGCT
TCGTACCTAACAACAATTATTATTGCATGGCCCAGATACTTGCTACATAT
TTGGCTCTCTACGCCAAGATAAATGGCAAAGGTAGTGAAGTGGTCTTTCC
AGGGACACAACGGTCATGGGAATGTTTGTCACAGGACAGCAGCCAGGATG
TCATAGCAAAGACGGCCATATATGCATCCCTCCACCCACAAGAAACTGCA
GGACAACGGTACAATGTGACAGACAGCGCTAGACCGGCATCTTGGAGTGA
GAAGTGGCCAGTAATTTGCGAGTACTTCGGGTTAAGGGGCACAGGCCCTC
GTGATGGTGTTGCCGGGCCTGTGCCGAACGAGTACCTAGTTGAGCACTAC
AATGAGTGGAGGGAACTGGAGAAAGAAGAGGGCCTTAAGACGGGAAGAGT
TGGCAACAACAAGAGCTACGGCGATTTTGCGCGTGTTATGATGACCTTAT
GTGATTTAGATCGACAGCTAGATATGAGCAAAACTCATGCGATGATGGGC
AGTGCTAAGGTCGAGACGGACAGCAGAGGAGCTTGGTGGACGGCATTCGA
TCGCTTCCGCCGCGCAAAGATTATTCCATGAGCGCCAGTGGAGTCAATGG
TTGGGCTGTGGTGAACGCTCTATTGCAAGGATATCCATCCGAGGATGCCT
TTGCATCTGTCACAGCATTGACAAACAGACCAGTTAGCTTGCAAGACACA
CTATGGCCAAAATCACCCAAGCTAGATCTCGTCAGCGGAATCGATCTGCT
CGCCGACGCAAAACTAGAGACCTTAGAGGATGAATTGAAAAGGAAGGTGG
CAAACGCCGACAAAATAACCCATGTCTACTTTTTTGATGTCTGAAAACCA
CGCGATAGTGTTTGCGTATATTATGGATGCCGATCCGAAGGCGGAGGTAC
ATAAAAATACAGAGCTAGTGAAACGAAGCGTGCTTGCCATCCAGAATGTT
TCGTCCCACCTCAAGTTCGTTGTTCTTGGGACTGGGGCCAAATCATATGG
ATCTCACCTTCTGGAGCAGTTCCCATTCCGCGATCAGGTTCCGCTCAAAG
AGTCACTACCGCGAATGCCCGAACCATTCGCATCGCAGATATTCTATTAT
CACCAAGTCGACCAGCTGTCTTGGATTTCTCAGGGAAAAAGTTGGTCCTT
CTGCGAGCTGATGCCTGACCTGGTTGTCGGCTTCGTACCTAACAACAATT
ATTATTGCATGGCCCAGATACTTGCTACATATTTGGCTCTCTACGCCAAG
ATAAATGGCAAAGGTAGTGAAGTGGTCTTTCCAGGGACACAACGGTCATG
GGAATGTTTGTCACAGGACAGCAGCCAGGATGTCATAGCAAAGACGGCCA
TATATGCATCCCTCCACCCACAAGAAACTGCAGGACAACGGTACAATGTG
ACAGACAGCGCTAGACCGGCATCTTGGAGTGAGAAGTGGCCAGTAATTTG
CGAGTACTTCGGGTTAAGGGGCACAGGCCCTCGTGATGGTGTTGCCGGGC
CTGTGCCGAACGAGTACCTAGTTGAGCACTACAATGAGTGGAGGGAACTG
GAGAAAGAAGAGGGCCTTAAGACGGGAAGAGTTGGCAACAACAAGAGCTA
CGGCGATTTTGCGCGTGTTATGATGACCTTATGTGATTTAGATCGACAGC
TAGATATGAGCAAAACTCATGCGATGATGGGCAGTGCTAAGGTCGAGACG
GACAGCAGAGGAGCTTGGTGGACGGCATTCGATCGCTTCCGCCGCGCAAA
GATTATTCCATGAGCGCCAGTGGAGTCAATGGTTGGGCTGTGGTGAACGC
TCTATTGCAAGGATATCCATCCGAGGATGCCTTTGCATCTGTCACAGCAT
TGACAAACAGACCAGTTAGCTTGCAAGACACACTATGGCCAAAATCACCC
AAGCTAGATCTCGTCAGCGGAATCGATCTGCTCGCCGACGCAAAACTAGA
GACCTTAGAGGATGAATTGAAAAGGAAGGTGGCAAACGCCGACAAAATAA
CCCATGTCTACTTTTTTGATGTCTGAAAACCACGCGATAGTGTTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000296KJC3_000296Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000296-T1KJC3_000296-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000296-T1.cdsKJC3_000296-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000296-T1.utr3p1KJC3_000296-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000296-T1.exon3KJC3_000296-T1.exon3Aspergillus niger KJC3exon
KJC3_000296-T1.exon2KJC3_000296-T1.exon2Aspergillus niger KJC3exon
KJC3_000296-T1.exon1KJC3_000296-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000296-T1.utr5p1KJC3_000296-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:473336..474942 -
Powered by Drupal