You are here

Home

KJC3_000300-T1, KJC3_000300-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000300-T1
Unique NameKJC3_000300-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:483120..484541+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000300-T1 ID=KJC3_000300-T1|Name=KJC3_000300-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1422bp|location=Sequence derived from alignment at ch1:483120..484541+ (Aspergillus niger KJC3)
ATGTATTCTCACACTATCTCTTGGAGCCATGCGGCTTTACTCTTCCTGTC
CCTTTCTTCTTTTCAATTCGGTACTGCCACGCCAATTGACAACCAGCTCG
TCGAACGCTCGGGTGTAGCCTCTCCGGGTATCGGCGTTGAGTTCGAGTCC
GGGAGTATCTATTTCACCAAAGATGTGCACAAATTGTCAGAGAAAGAGAA
AGAGGCGGTCAAAGAAGCTGGTATCGACGCAAAAGGCAAGGCTGTTACAT
TGCGAACGGCCAAGGACGGCAATGGTGCCAAGTTGTCTGGTAAAGACTGG
GAGTTGACAGCGGATGCCACGGGAGGCACGGTGGGACATCTACCTGCAGA
GTATATCCTAGATGGGAAGAAGATCAAATTGGGAACAGGGAGACTTGCAA
TTGCAGCAGAGGAGGTCTATGAAGATCTGGTATGATAGCTACACAGCATC
TGAGTGGGAGACGTATGGGGCAGACTAACTGACCACCCTCTGATACAGAA
AAAGTGGAACCCGAAGAGCGGCCAGGAGGTTGAAATCGCCGGCAATAAGA
AAAACCCTTGGAGTCTCAAGGTGGGCACAAATCCAGTGAACTCAGCCTGG
TCTCGTCAGATCACCTCCCCAATGCCACTTGGGGCCATCAACGACCTGAT
AAAGCAAGCCAAACTCAACAAGCCCTCACCCCTCATGACCTACGCAAGTA
GCAAGATCCAGAACAAGGTCTGGGTTAATGATTTCTTCTTCGAAGAGAAC
CCTGGTGGCCTTACCAAGGATGTTGGCGAAGATGTTCGCGGATTCCTTTC
GCTTCTTCTTTCCTATGCAAAGGCTGGCAGCCAGGTCCGAAACAGTGAGA
GCGCTAAGGAACTGACATCGATCATGCCGCGAACAAGTTTCTCCAAGATG
TACAAGCTCATTGAGAAGAAGCTTGAAAAGAAGGATCTGTGGACTATTGT
GAACAAGCTTGCTTGCTATGAAAACCCTATCGACGATGCACATGAATATG
CCGCGTAAGTTTGGTGCAACTACGTTACCTGAGGTGAAATCTTGATTAAC
ACTATCTGATTTAGTGTTGATGAGCGGTATTGCTCTGGGCACCCTGGGCA
GACGACAATCAATGGCAAGTTCGAGAAACTGCAGATTAACATCTGCTACG
GCTCACAGTCTTGCCCTGTCAATGTCAAGGCCTGGATCCAAGGTCTGAAG
GATGGCAAAGATCTGCTTAAAGATGCTGATAAGGAAATGATTGATGGCCA
AGTTGGAGGATATGGAGACTTGACCGAGCATCGCCTGGACCATCCTACGG
AGCAACTGCCCCTTTTCGAATTCCGTGATCTTCCTTCATGCTCGGCTTCA
GACTGGAAGAAATGTTTGGAGAAGGCCGAAACTGAGATTGTCAACTATCA
CAAGAAGTTTCCTGGAAACTAG
back to top

Coding sequence (CDS) from alignment at ch1:483120..484541+

>KJC3_000300-T1 ID=KJC3_000300-T1|Name=KJC3_000300-T1|organism=Aspergillus niger KJC3|type=CDS|length=3879bp|location=Sequence derived from alignment at ch1:483120..484541+ (Aspergillus niger KJC3)
ATGTATTCTCACACTATCTCTTGGAGCCATGCGGCTTTACTCTTCCTGTC
CCTTTCTTCTTTTCAATTCGGTACTGCCACGCCAATTGACAACCAGCTCG
TCGAACGCTCGGGTGTAGCCTCTCCGGGTATCGGCGTTGAGTTCGAGTCC
GGGAGTATCTATTTCACCAAAGATGTGCACAAATTGTCAGAGAAAGAGAA
AGAGGCGGTCAAAGAAGCTGGTATCGACGCAAAAGGCAAGGCTGTTACAT
TGCGAACGGCCAAGGACGGCAATGGTGCCAAGTTGTCTGGTAAAGACTGG
GAGTTGACAGCGGATGCCACGGGAGGCACGGTGGGACATCTACCTGCAGA
GTATATCCTAGATGGGAAGAAGATCAAATTGGGAACAGGGAGACTTGCAA
TTGCAGCAGAGGAGGTCTATGAAGATCTGAAAAAGTGGAACCCGAAGAGC
GGCCAGGAGGTTGAAATCGCCGGCAATAAGAAAAACCCTTGGAGTCTCAA
GGTGGGCACAAATCCAGTGAACTCAGCCTGGTCTCGTCAGATCACCTCCC
CAATGCCACTTGGGGCCATCAACGACCTGATAAAGCAAGCCAAACTCAAC
AAGCCCTCACCCCTCATGACCTACGCAAGTAGCAAGATCCAGAACAAGGT
CTGGGTTAATGATTTCTTCTTCGAAGAGAACCCTGGTGGCCTTACCAAGG
ATGTTGGCGAAGATGTTCGCGGATTCCTTTCGCTTCTTCTTTCCTATGCA
AAGGCTGGCAGCCAGGTCCGAAACAGTGAGAGCGCTAAGGAACTGACATC
GATCATGCCGCGAACAAGTTTCTCCAAGATGTACAAGCTCATTGAGAAGA
AGCTTGAAAAGAAGGATCTGTGGACTATTGTGAACAAGCTTGCTTGCTAT
GAAAACCCTATCGACGATGCACATGAATATGCCGCTGTTGATGAGCGGTA
TTGCTCTGGGCACCCTGGGCAGACGACAATCAATGGCAAGTTCGAGAAAC
TGCAGATTAACATCTGCTACGGCTCACAGTCTTGCCCTGTCAATGTCAAG
GCCTGGATCCAAGGTCTGAAGGATGGCAAAGATCTGCTTAAAGATGCTGA
TAAGGAAATGATTGATGGCCAAGTTGGAGGATATGGAGACTTGACCGAGC
ATCGCCTGGACCATCCTACGGAGCAACTGCCCCTTTTCGAATTCCGTGAT
CTTCCTTCATGCTCGGCTTCAGACTGGAAGAAATGTTTGGAGAAGGCCGA
AACTGAGATTGTCAACTATCACAAGAAGTTTCCTGGAAACTAGATGTATT
CTCACACTATCTCTTGGAGCCATGCGGCTTTACTCTTCCTGTCCCTTTCT
TCTTTTCAATTCGGTACTGCCACGCCAATTGACAACCAGCTCGTCGAACG
CTCGGGTGTAGCCTCTCCGGGTATCGGCGTTGAGTTCGAGTCCGGGAGTA
TCTATTTCACCAAAGATGTGCACAAATTGTCAGAGAAAGAGAAAGAGGCG
GTCAAAGAAGCTGGTATCGACGCAAAAGGCAAGGCTGTTACATTGCGAAC
GGCCAAGGACGGCAATGGTGCCAAGTTGTCTGGTAAAGACTGGGAGTTGA
CAGCGGATGCCACGGGAGGCACGGTGGGACATCTACCTGCAGAGTATATC
CTAGATGGGAAGAAGATCAAATTGGGAACAGGGAGACTTGCAATTGCAGC
AGAGGAGGTCTATGAAGATCTGAAAAAGTGGAACCCGAAGAGCGGCCAGG
AGGTTGAAATCGCCGGCAATAAGAAAAACCCTTGGAGTCTCAAGGTGGGC
ACAAATCCAGTGAACTCAGCCTGGTCTCGTCAGATCACCTCCCCAATGCC
ACTTGGGGCCATCAACGACCTGATAAAGCAAGCCAAACTCAACAAGCCCT
CACCCCTCATGACCTACGCAAGTAGCAAGATCCAGAACAAGGTCTGGGTT
AATGATTTCTTCTTCGAAGAGAACCCTGGTGGCCTTACCAAGGATGTTGG
CGAAGATGTTCGCGGATTCCTTTCGCTTCTTCTTTCCTATGCAAAGGCTG
GCAGCCAGGTCCGAAACAGTGAGAGCGCTAAGGAACTGACATCGATCATG
CCGCGAACAAGTTTCTCCAAGATGTACAAGCTCATTGAGAAGAAGCTTGA
AAAGAAGGATCTGTGGACTATTGTGAACAAGCTTGCTTGCTATGAAAACC
CTATCGACGATGCACATGAATATGCCGCTGTTGATGAGCGGTATTGCTCT
GGGCACCCTGGGCAGACGACAATCAATGGCAAGTTCGAGAAACTGCAGAT
TAACATCTGCTACGGCTCACAGTCTTGCCCTGTCAATGTCAAGGCCTGGA
TCCAAGGTCTGAAGGATGGCAAAGATCTGCTTAAAGATGCTGATAAGGAA
ATGATTGATGGCCAAGTTGGAGGATATGGAGACTTGACCGAGCATCGCCT
GGACCATCCTACGGAGCAACTGCCCCTTTTCGAATTCCGTGATCTTCCTT
CATGCTCGGCTTCAGACTGGAAGAAATGTTTGGAGAAGGCCGAAACTGAG
ATTGTCAACTATCACAAGAAGTTTCCTGGAAACTAGATGTATTCTCACAC
TATCTCTTGGAGCCATGCGGCTTTACTCTTCCTGTCCCTTTCTTCTTTTC
AATTCGGTACTGCCACGCCAATTGACAACCAGCTCGTCGAACGCTCGGGT
GTAGCCTCTCCGGGTATCGGCGTTGAGTTCGAGTCCGGGAGTATCTATTT
CACCAAAGATGTGCACAAATTGTCAGAGAAAGAGAAAGAGGCGGTCAAAG
AAGCTGGTATCGACGCAAAAGGCAAGGCTGTTACATTGCGAACGGCCAAG
GACGGCAATGGTGCCAAGTTGTCTGGTAAAGACTGGGAGTTGACAGCGGA
TGCCACGGGAGGCACGGTGGGACATCTACCTGCAGAGTATATCCTAGATG
GGAAGAAGATCAAATTGGGAACAGGGAGACTTGCAATTGCAGCAGAGGAG
GTCTATGAAGATCTGAAAAAGTGGAACCCGAAGAGCGGCCAGGAGGTTGA
AATCGCCGGCAATAAGAAAAACCCTTGGAGTCTCAAGGTGGGCACAAATC
CAGTGAACTCAGCCTGGTCTCGTCAGATCACCTCCCCAATGCCACTTGGG
GCCATCAACGACCTGATAAAGCAAGCCAAACTCAACAAGCCCTCACCCCT
CATGACCTACGCAAGTAGCAAGATCCAGAACAAGGTCTGGGTTAATGATT
TCTTCTTCGAAGAGAACCCTGGTGGCCTTACCAAGGATGTTGGCGAAGAT
GTTCGCGGATTCCTTTCGCTTCTTCTTTCCTATGCAAAGGCTGGCAGCCA
GGTCCGAAACAGTGAGAGCGCTAAGGAACTGACATCGATCATGCCGCGAA
CAAGTTTCTCCAAGATGTACAAGCTCATTGAGAAGAAGCTTGAAAAGAAG
GATCTGTGGACTATTGTGAACAAGCTTGCTTGCTATGAAAACCCTATCGA
CGATGCACATGAATATGCCGCTGTTGATGAGCGGTATTGCTCTGGGCACC
CTGGGCAGACGACAATCAATGGCAAGTTCGAGAAACTGCAGATTAACATC
TGCTACGGCTCACAGTCTTGCCCTGTCAATGTCAAGGCCTGGATCCAAGG
TCTGAAGGATGGCAAAGATCTGCTTAAAGATGCTGATAAGGAAATGATTG
ATGGCCAAGTTGGAGGATATGGAGACTTGACCGAGCATCGCCTGGACCAT
CCTACGGAGCAACTGCCCCTTTTCGAATTCCGTGATCTTCCTTCATGCTC
GGCTTCAGACTGGAAGAAATGTTTGGAGAAGGCCGAAACTGAGATTGTCA
ACTATCACAAGAAGTTTCCTGGAAACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000300KJC3_000300Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000300-T1.exon1KJC3_000300-T1.exon1Aspergillus niger KJC3exon
KJC3_000300-T1.exon2KJC3_000300-T1.exon2Aspergillus niger KJC3exon
KJC3_000300-T1.exon3KJC3_000300-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000300-T1.cdsKJC3_000300-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000300-T1KJC3_000300-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:483120..484541 +
Powered by Drupal