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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:516125..518129- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000312-T1 ID=KJC3_000312-T1|Name=KJC3_000312-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2005bp|location=Sequence derived from alignment at ch1:516125..518129- (Aspergillus niger KJC3)
AGCAAAAGCAATGGAACCGAACGCAGGAACCGCGTGGTCGGTGCTTGGCC
TGTCAAAATTCCCCGATCGTCGATCCGATAGTCACGATGATGGACCCCGA
AGACAACCCGCCAGCTTCTTGTTTGTCAACTATCAGGCCCAGACTTCGCA
GGGCTCCACGGTTTCCAAAAAGAAGCATGCTTTCATCAAGACGATGTATC
ATCGATCCAAAAAGGAACAGCGACTGCAAAAGCTGAAAGCTTCCATCGGC
CCGTTGCCGACCCAACGATCCAACCCATCAATCCTCCCGTCAACACCGGG
ATCCACCACATTCCCCATAGACGCGGAGGCGAGGGTCGAAGAATACGAGG
CATGCTCCTTCGACCGGGCGTTGCGGCCCGCTGGGATTGACCCCTTTGCT
TCGCTCTGTGTGCCTGCCAAGTCCAGCGTGGATTTCTACTTTGACCACTG
TAAGATCGAGTCTACCTCGTCCGGTCGCATCAACGCCACTGACCTCTCTG
ATCATGCTTCCAGACCGGACCGAATGTTCCTGGTCAATCTATCCCTTTGG
GGCGACAGGCGTCAGCATCTGGTGGTGGCAGCAATCAATCGAGCAGCCGG
CCCTATTGTATATCATCCTGGCAACCAGTGCCTCCCACAGGGCGGGCCGA
GGGCTCATCGCGCAGGCCCCCAAGGCCGCCCAAGATTCTCACCGGGCCTC
CCTAGAGTACCGGCAAAAAACTATCTCAGGACTCCAGAGCATGATGAAAA
TTCCAGGCACAAGTTTGCTTCGGTCTATGGCGGTCATCATCGCCCACTTG
ATCTGCGTAGAGGTTGGTTCCTCTCCTTTTCCAATCTCATCTTGTTTCAT
CACACCGAGCGCGTTTTGAATGAGAGGATTAACCACACAATGATCGAGCT
CCATACCTTAGGCCGCAGACACCAATTTGGAAGCCGTCGACGGCCATGTG
CGCGGCCTGATCAAGATCGTACATCTCGTGGGTGGTCTTGATACGTTCAG
TGAGGCTGACGCCCCCATTATTTACAGGTGGGTTGCGAACACGAATGTAC
TACCACATCGACAGTACTGTCTAGTATTAACCAGTGGGGTTTATCCCTCT
TTCTAGTGCCAATTTCATGAGCGCAGCTGCCAGAGGCTCGGCGCCGCCCT
TGCCAATAACCGTAGCTTGGAGAGCCAGAGTACTTGAAAGTTTGTCTAAT
CTCACTGCGACCGACGACGCCCTGCATGCTTCTTCAATCGGTTTCCGCTT
CTTCAACTCATCGTGGTCACAAGCAATTCTCCCTAGTTTGCGATCTATAA
TTAAGCTGTTTCGAAGAACCACGCATTACATGTGTACTACTGGACCAGTT
GAGGAAGCCCCTGTACTCAACGACTGGTTGGTCTACACAGCCCAACAGTT
GTTGTTGATCGCCCCGGACTGTGTGCTTTCTGACTTGCAGGAATGCTTGC
GACTGTCAGTTCTGCTCTTTGCTGCAGTCCAGGTCTGGGGCTTTCAGGGC
TTGTTGTTCCTGAATCGACCCGTACTGGCCTTCCACTGTCGCTTGGAAGC
CGCGCTTCTCCCTATTCGACGCTTGGCAGTCGATCTATCTTTCTGGATGC
TCTTTACCGGTGGAATTGCAGCAATGGGTCATCCCAGTCGCGCGTGGTTC
GTGGACCGTCTCGCCGAGGTGGCCGGTCAATTGTCTCTCGCAACATGGGA
CAGCGCGCGGGCCTTGTTGGAACAGTTTCTCTTCTTCTCTCGGCCTACTG
ATACCCGAGCTGAAATTCTCTGGAAGGAAGTAGAAAGGCAACAAGATGTG
ATGCAGGATATAGAGAATCCATACAGTGCGCAACGATGCATCACAGTCGG
ATTAGACCCATGATTTCAACCACTACTACTATCAGCTTGTTGGTATAGGA
GGAATGGAGGGAGCGAGGGACGGATATATGGAGAGCCGTCATGCGCAGGA
AGAAGAACACCACTAAATAGCGCATACAGGCAGTTTTATCAACAGTTCAT
GTGAG back to topCoding sequence (CDS) from alignment at ch1:516125..518129- >KJC3_000312-T1 ID=KJC3_000312-T1|Name=KJC3_000312-T1|organism=Aspergillus niger KJC3|type=CDS|length=6444bp|location=Sequence derived from alignment at ch1:516125..518129- (Aspergillus niger KJC3)
TGCCAATTTCATGAGCGCAGCTGCCAGAGGCTCGGCGCCGCCCTTGCCAA
TAACCGTAGCTTGGAGAGCCAGAGTACTTGAAAGTTTGTCTAATCTCACT
GCGACCGACGACGCCCTGCATGCTTCTTCAATCGGTTTCCGCTTCTTCAA
CTCATCGTGGTCACAAGCAATTCTCCCTAGTTTGCGATCTATAATTAAGC
TGTTTCGAAGAACCACGCATTACATGTGTACTACTGGACCAGTTGAGGAA
GCCCCTGTACTCAACGACTGGTTGGTCTACACAGCCCAACAGTTGTTGTT
GATCGCCCCGGACTGTGTGCTTTCTGACTTGCAGGAATGCTTGCGACTGT
CAGTTCTGCTCTTTGCTGCAGTCCAGGTCTGGGGCTTTCAGGGCTTGTTG
TTCCTGAATCGACCCGTACTGGCCTTCCACTGTCGCTTGGAAGCCGCGCT
TCTCCCTATTCGACGCTTGGCAGTCGATCTATCTTTCTGGATGCTCTTTA
CCGGTGGAATTGCAGCAATGGGTCATCCCAGTCGCGCGTGGTTCGTGGAC
CGTCTCGCCGAGGTGGCCGGTCAATTGTCTCTCGCAACATGGGACAGCGC
GCGGGCCTTGTTGGAACAGTTTCTCTTCTTCTCTCGGCCTACTGATACCC
GAGCTGAAATTCTCTGGAAGGAAGTAGAAAGGCAACAAGATGTGATGCAG
GATATAGAGAATCCATACAGTGCGCAACGATGCATCACAGTCGGATTAGA
CCCATGAGCCGCAGACACCAATTTGGAAGCCGTCGACGGCCATGTGCGCG
GCCTGATCAAGATCGTACATCTCGTGGGTGGTCTTGATACGTTCAGTGAG
GCTGACGCCCCCATTATTTACAGACCGGACCGAATGTTCCTGGTCAATCT
ATCCCTTTGGGGCGACAGGCGTCAGCATCTGGTGGTGGCAGCAATCAATC
GAGCAGCCGGCCCTATTGTATATCATCCTGGCAACCAGTGCCTCCCACAG
GGCGGGCCGAGGGCTCATCGCGCAGGCCCCCAAGGCCGCCCAAGATTCTC
ACCGGGCCTCCCTAGAGTACCGGCAAAAAACTATCTCAGGACTCCAGAGC
ATGATGAAAATTCCAGGCACAAGTTTGCTTCGGTCTATGGCGGTCATCAT
CGCCCACTTGATCTGCGTAGAGATGGAACCGAACGCAGGAACCGCGTGGT
CGGTGCTTGGCCTGTCAAAATTCCCCGATCGTCGATCCGATAGTCACGAT
GATGGACCCCGAAGACAACCCGCCAGCTTCTTGTTTGTCAACTATCAGGC
CCAGACTTCGCAGGGCTCCACGGTTTCCAAAAAGAAGCATGCTTTCATCA
AGACGATGTATCATCGATCCAAAAAGGAACAGCGACTGCAAAAGCTGAAA
GCTTCCATCGGCCCGTTGCCGACCCAACGATCCAACCCATCAATCCTCCC
GTCAACACCGGGATCCACCACATTCCCCATAGACGCGGAGGCGAGGGTCG
AAGAATACGAGGCATGCTCCTTCGACCGGGCGTTGCGGCCCGCTGGGATT
GACCCCTTTGCTTCGCTCTGTGTGCCTGCCAAGTCCAGCGTGGATTTCTA
CTTTGACCACTTGCCAATTTCATGAGCGCAGCTGCCAGAGGCTCGGCGCC
GCCCTTGCCAATAACCGTAGCTTGGAGAGCCAGAGTACTTGAAAGTTTGT
CTAATCTCACTGCGACCGACGACGCCCTGCATGCTTCTTCAATCGGTTTC
CGCTTCTTCAACTCATCGTGGTCACAAGCAATTCTCCCTAGTTTGCGATC
TATAATTAAGCTGTTTCGAAGAACCACGCATTACATGTGTACTACTGGAC
CAGTTGAGGAAGCCCCTGTACTCAACGACTGGTTGGTCTACACAGCCCAA
CAGTTGTTGTTGATCGCCCCGGACTGTGTGCTTTCTGACTTGCAGGAATG
CTTGCGACTGTCAGTTCTGCTCTTTGCTGCAGTCCAGGTCTGGGGCTTTC
AGGGCTTGTTGTTCCTGAATCGACCCGTACTGGCCTTCCACTGTCGCTTG
GAAGCCGCGCTTCTCCCTATTCGACGCTTGGCAGTCGATCTATCTTTCTG
GATGCTCTTTACCGGTGGAATTGCAGCAATGGGTCATCCCAGTCGCGCGT
GGTTCGTGGACCGTCTCGCCGAGGTGGCCGGTCAATTGTCTCTCGCAACA
TGGGACAGCGCGCGGGCCTTGTTGGAACAGTTTCTCTTCTTCTCTCGGCC
TACTGATACCCGAGCTGAAATTCTCTGGAAGGAAGTAGAAAGGCAACAAG
ATGTGATGCAGGATATAGAGAATCCATACAGTGCGCAACGATGCATCACA
GTCGGATTAGACCCATGAGCCGCAGACACCAATTTGGAAGCCGTCGACGG
CCATGTGCGCGGCCTGATCAAGATCGTACATCTCGTGGGTGGTCTTGATA
CGTTCAGTGAGGCTGACGCCCCCATTATTTACAGACCGGACCGAATGTTC
CTGGTCAATCTATCCCTTTGGGGCGACAGGCGTCAGCATCTGGTGGTGGC
AGCAATCAATCGAGCAGCCGGCCCTATTGTATATCATCCTGGCAACCAGT
GCCTCCCACAGGGCGGGCCGAGGGCTCATCGCGCAGGCCCCCAAGGCCGC
CCAAGATTCTCACCGGGCCTCCCTAGAGTACCGGCAAAAAACTATCTCAG
GACTCCAGAGCATGATGAAAATTCCAGGCACAAGTTTGCTTCGGTCTATG
GCGGTCATCATCGCCCACTTGATCTGCGTAGAGATGGAACCGAACGCAGG
AACCGCGTGGTCGGTGCTTGGCCTGTCAAAATTCCCCGATCGTCGATCCG
ATAGTCACGATGATGGACCCCGAAGACAACCCGCCAGCTTCTTGTTTGTC
AACTATCAGGCCCAGACTTCGCAGGGCTCCACGGTTTCCAAAAAGAAGCA
TGCTTTCATCAAGACGATGTATCATCGATCCAAAAAGGAACAGCGACTGC
AAAAGCTGAAAGCTTCCATCGGCCCGTTGCCGACCCAACGATCCAACCCA
TCAATCCTCCCGTCAACACCGGGATCCACCACATTCCCCATAGACGCGGA
GGCGAGGGTCGAAGAATACGAGGCATGCTCCTTCGACCGGGCGTTGCGGC
CCGCTGGGATTGACCCCTTTGCTTCGCTCTGTGTGCCTGCCAAGTCCAGC
GTGGATTTCTACTTTGACCACTTGCCAATTTCATGAGCGCAGCTGCCAGA
GGCTCGGCGCCGCCCTTGCCAATAACCGTAGCTTGGAGAGCCAGAGTACT
TGAAAGTTTGTCTAATCTCACTGCGACCGACGACGCCCTGCATGCTTCTT
CAATCGGTTTCCGCTTCTTCAACTCATCGTGGTCACAAGCAATTCTCCCT
AGTTTGCGATCTATAATTAAGCTGTTTCGAAGAACCACGCATTACATGTG
TACTACTGGACCAGTTGAGGAAGCCCCTGTACTCAACGACTGGTTGGTCT
ACACAGCCCAACAGTTGTTGTTGATCGCCCCGGACTGTGTGCTTTCTGAC
TTGCAGGAATGCTTGCGACTGTCAGTTCTGCTCTTTGCTGCAGTCCAGGT
CTGGGGCTTTCAGGGCTTGTTGTTCCTGAATCGACCCGTACTGGCCTTCC
ACTGTCGCTTGGAAGCCGCGCTTCTCCCTATTCGACGCTTGGCAGTCGAT
CTATCTTTCTGGATGCTCTTTACCGGTGGAATTGCAGCAATGGGTCATCC
CAGTCGCGCGTGGTTCGTGGACCGTCTCGCCGAGGTGGCCGGTCAATTGT
CTCTCGCAACATGGGACAGCGCGCGGGCCTTGTTGGAACAGTTTCTCTTC
TTCTCTCGGCCTACTGATACCCGAGCTGAAATTCTCTGGAAGGAAGTAGA
AAGGCAACAAGATGTGATGCAGGATATAGAGAATCCATACAGTGCGCAAC
GATGCATCACAGTCGGATTAGACCCATGAGCCGCAGACACCAATTTGGAA
GCCGTCGACGGCCATGTGCGCGGCCTGATCAAGATCGTACATCTCGTGGG
TGGTCTTGATACGTTCAGTGAGGCTGACGCCCCCATTATTTACAGACCGG
ACCGAATGTTCCTGGTCAATCTATCCCTTTGGGGCGACAGGCGTCAGCAT
CTGGTGGTGGCAGCAATCAATCGAGCAGCCGGCCCTATTGTATATCATCC
TGGCAACCAGTGCCTCCCACAGGGCGGGCCGAGGGCTCATCGCGCAGGCC
CCCAAGGCCGCCCAAGATTCTCACCGGGCCTCCCTAGAGTACCGGCAAAA
AACTATCTCAGGACTCCAGAGCATGATGAAAATTCCAGGCACAAGTTTGC
TTCGGTCTATGGCGGTCATCATCGCCCACTTGATCTGCGTAGAGATGGAA
CCGAACGCAGGAACCGCGTGGTCGGTGCTTGGCCTGTCAAAATTCCCCGA
TCGTCGATCCGATAGTCACGATGATGGACCCCGAAGACAACCCGCCAGCT
TCTTGTTTGTCAACTATCAGGCCCAGACTTCGCAGGGCTCCACGGTTTCC
AAAAAGAAGCATGCTTTCATCAAGACGATGTATCATCGATCCAAAAAGGA
ACAGCGACTGCAAAAGCTGAAAGCTTCCATCGGCCCGTTGCCGACCCAAC
GATCCAACCCATCAATCCTCCCGTCAACACCGGGATCCACCACATTCCCC
ATAGACGCGGAGGCGAGGGTCGAAGAATACGAGGCATGCTCCTTCGACCG
GGCGTTGCGGCCCGCTGGGATTGACCCCTTTGCTTCGCTCTGTGTGCCTG
CCAAGTCCAGCGTGGATTTCTACTTTGACCACTTGCCAATTTCATGAGCG
CAGCTGCCAGAGGCTCGGCGCCGCCCTTGCCAATAACCGTAGCTTGGAGA
GCCAGAGTACTTGAAAGTTTGTCTAATCTCACTGCGACCGACGACGCCCT
GCATGCTTCTTCAATCGGTTTCCGCTTCTTCAACTCATCGTGGTCACAAG
CAATTCTCCCTAGTTTGCGATCTATAATTAAGCTGTTTCGAAGAACCACG
CATTACATGTGTACTACTGGACCAGTTGAGGAAGCCCCTGTACTCAACGA
CTGGTTGGTCTACACAGCCCAACAGTTGTTGTTGATCGCCCCGGACTGTG
TGCTTTCTGACTTGCAGGAATGCTTGCGACTGTCAGTTCTGCTCTTTGCT
GCAGTCCAGGTCTGGGGCTTTCAGGGCTTGTTGTTCCTGAATCGACCCGT
ACTGGCCTTCCACTGTCGCTTGGAAGCCGCGCTTCTCCCTATTCGACGCT
TGGCAGTCGATCTATCTTTCTGGATGCTCTTTACCGGTGGAATTGCAGCA
ATGGGTCATCCCAGTCGCGCGTGGTTCGTGGACCGTCTCGCCGAGGTGGC
CGGTCAATTGTCTCTCGCAACATGGGACAGCGCGCGGGCCTTGTTGGAAC
AGTTTCTCTTCTTCTCTCGGCCTACTGATACCCGAGCTGAAATTCTCTGG
AAGGAAGTAGAAAGGCAACAAGATGTGATGCAGGATATAGAGAATCCATA
CAGTGCGCAACGATGCATCACAGTCGGATTAGACCCATGAGCCGCAGACA
CCAATTTGGAAGCCGTCGACGGCCATGTGCGCGGCCTGATCAAGATCGTA
CATCTCGTGGGTGGTCTTGATACGTTCAGTGAGGCTGACGCCCCCATTAT
TTACAGACCGGACCGAATGTTCCTGGTCAATCTATCCCTTTGGGGCGACA
GGCGTCAGCATCTGGTGGTGGCAGCAATCAATCGAGCAGCCGGCCCTATT
GTATATCATCCTGGCAACCAGTGCCTCCCACAGGGCGGGCCGAGGGCTCA
TCGCGCAGGCCCCCAAGGCCGCCCAAGATTCTCACCGGGCCTCCCTAGAG
TACCGGCAAAAAACTATCTCAGGACTCCAGAGCATGATGAAAATTCCAGG
CACAAGTTTGCTTCGGTCTATGGCGGTCATCATCGCCCACTTGATCTGCG
TAGAGATGGAACCGAACGCAGGAACCGCGTGGTCGGTGCTTGGCCTGTCA
AAATTCCCCGATCGTCGATCCGATAGTCACGATGATGGACCCCGAAGACA
ACCCGCCAGCTTCTTGTTTGTCAACTATCAGGCCCAGACTTCGCAGGGCT
CCACGGTTTCCAAAAAGAAGCATGCTTTCATCAAGACGATGTATCATCGA
TCCAAAAAGGAACAGCGACTGCAAAAGCTGAAAGCTTCCATCGGCCCGTT
GCCGACCCAACGATCCAACCCATCAATCCTCCCGTCAACACCGGGATCCA
CCACATTCCCCATAGACGCGGAGGCGAGGGTCGAAGAATACGAGGCATGC
TCCTTCGACCGGGCGTTGCGGCCCGCTGGGATTGACCCCTTTGCTTCGCT
CTGTGTGCCTGCCAAGTCCAGCGTGGATTTCTACTTTGACCACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000312-T1.utr3p1 | KJC3_000312-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000312-T1.utr5p1 | KJC3_000312-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.2 |
| DBxref | InterPro:IPR021858 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:516125..518129 - |
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