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KJC3_000317-T1, KJC3_000317-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000317-T1
Unique NameKJC3_000317-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:525962..527236-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000317-T1 ID=KJC3_000317-T1|Name=KJC3_000317-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1275bp|location=Sequence derived from alignment at ch1:525962..527236- (Aspergillus niger KJC3)
CTATCGGTGGCATACTACTGCTACTATATACAGTGCCGCTAACTACATGG
CGCATTAGACGAACACCACCCGCCCACGCTACGAGCAGATATCGCAGTAA
TAGTACTGCAGTGCCAGGAAGTCTTGTTTCTGGCACTCACTCAACAGCTG
ACTTTGACAATCGTGCCTCTACATAAACACCTTCACGTCCCAAAATACTC
ACCATGACCACCGTCACGGCCCCCGCGCCCTGGATCACCAGCAGCCAACA
ATGTACCCTAGAGACATGTCCGCTATCATATGCCCATATCACCTATCTCC
CTAACCTAGGCGGCAATGCCTTCTACATCGCTCTATTCGCCCTCTTCATC
CCCGTCCAACTCTACCTCGGCATCCGACACCGTACCTGGGGGTACCTCTT
CGGCGCCATCTGCGGCCTTATCCTCGAAGTCCTGGGCTACATAGCACGCA
TTTACATGCGACACAACCCATTCATTGACCGGTGGTTCATCATGTATGTT
CATCCCAACAACCCCTCATCTCCCCTCCACCACTAACCAAATTAAATACA
GGTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCTCAGCGGCGCCATC
TACGTTTCCCTAGCCCGGATTGTCGGCGCCTACTCGTCCCAATTATCCCG
GATAAAACAGCGTAACTACTCCCTGATCTTCATCAGCTTCGACATCATCT
CCCTCCTGCTACAAGCCGCCGGAGGCGCCATCACTACCTCGAACTCCGCC
TCCGAAGTACAAGACGGGATCAACATCATGATAGCCGGTCTCAGCTCCCA
AGTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTCGACTACGCCTTCC
GAGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACCATCGAACATGTTC
CGCATGGCAAACCACACGAAGCAGGAATCCGAAAGCCAGGATCTAGTCTC
GGGTTCCAGGGACTTGGTGACCCTGAACCCGGACTTCGCTAGTCTCCGGG
CGAGTAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGGGTTGGCGGTCGTG
TGTATTTACATTCGGAGTTGTTTCCGGGTTGCAGAGCTGTGTGGTGGGTT
TAGTAGCCATTTGGCGAATGATCAGACGACGTTCATGGTGTTGGAGGGGG
CGATGATTAGTATTGCGGTTATTGCGATGAGTAGTTGGGGGCATCCGGGA
GTTGGGTTCCATGGGAGATGGGATGCGTTGAATTATCCGATGTTTCAAAG
GACGAAGAAGGGGGTGGATGTTTAG
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Coding sequence (CDS) from alignment at ch1:525962..527236-

>KJC3_000317-T1 ID=KJC3_000317-T1|Name=KJC3_000317-T1|organism=Aspergillus niger KJC3|type=CDS|length=2028bp|location=Sequence derived from alignment at ch1:525962..527236- (Aspergillus niger KJC3)
GTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCTCAGCGGCGCCATCT
ACGTTTCCCTAGCCCGGATTGTCGGCGCCTACTCGTCCCAATTATCCCGG
ATAAAACAGCGTAACTACTCCCTGATCTTCATCAGCTTCGACATCATCTC
CCTCCTGCTACAAGCCGCCGGAGGCGCCATCACTACCTCGAACTCCGCCT
CCGAAGTACAAGACGGGATCAACATCATGATAGCCGGTCTCAGCTCCCAA
GTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTCGACTACGCCTTCCG
AGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACCATCGAACATGTTCC
GCATGGCAAACCACACGAAGCAGGAATCCGAAAGCCAGGATCTAGTCTCG
GGTTCCAGGGACTTGGTGACCCTGAACCCGGACTTCGCTAGTCTCCGGGC
GAGTAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGGGTTGGCGGTCGTGT
GTATTTACATTCGGAGTTGTTTCCGGGTTGCAGAGCTGTGTGGTGGGTTT
AGTAGCCATTTGGCGAATGATCAGACGACGTTCATGGTGTTGGAGGGGGC
GATGATTAGTATTGCGGTTATTGCGATGAGTAGTTGGGGGCATCCGGGAG
TTGGGTTCCATGGGAGATGGGATGCGTTGAATTATCCGATGTTTCAAAGG
ACGAAGAAGGGGGTGGATGTTTAGATGACCACCGTCACGGCCCCCGCGCC
CTGGATCACCAGCAGCCAACAATGTACCCTAGAGACATGTCCGCTATCAT
ATGCCCATATCACCTATCTCCCTAACCTAGGCGGCAATGCCTTCTACATC
GCTCTATTCGCCCTCTTCATCCCCGTCCAACTCTACCTCGGCATCCGACA
CCGTACCTGGGGGTACCTCTTCGGCGCCATCTGCGGCCTTATCCTCGAAG
TCCTGGGCTACATAGCACGCATTTACATGCGACACAACCCATTCATTGAC
CGGTGGTTCATCATGTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCT
CAGCGGCGCCATCTACGTTTCCCTAGCCCGGATTGTCGGCGCCTACTCGT
CCCAATTATCCCGGATAAAACAGCGTAACTACTCCCTGATCTTCATCAGC
TTCGACATCATCTCCCTCCTGCTACAAGCCGCCGGAGGCGCCATCACTAC
CTCGAACTCCGCCTCCGAAGTACAAGACGGGATCAACATCATGATAGCCG
GTCTCAGCTCCCAAGTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTC
GACTACGCCTTCCGAGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACC
ATCGAACATGTTCCGCATGGCAAACCACACGAAGCAGGAATCCGAAAGCC
AGGATCTAGTCTCGGGTTCCAGGGACTTGGTGACCCTGAACCCGGACTTC
GCTAGTCTCCGGGCGAGTAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGG
GTTGGCGGTCGTGTGTATTTACATTCGGAGTTGTTTCCGGGTTGCAGAGC
TGTGTGGTGGGTTTAGTAGCCATTTGGCGAATGATCAGACGACGTTCATG
GTGTTGGAGGGGGCGATGATTAGTATTGCGGTTATTGCGATGAGTAGTTG
GGGGCATCCGGGAGTTGGGTTCCATGGGAGATGGGATGCGTTGAATTATC
CGATGTTTCAAAGGACGAAGAAGGGGGTGGATGTTTAGATGACCACCGTC
ACGGCCCCCGCGCCCTGGATCACCAGCAGCCAACAATGTACCCTAGAGAC
ATGTCCGCTATCATATGCCCATATCACCTATCTCCCTAACCTAGGCGGCA
ATGCCTTCTACATCGCTCTATTCGCCCTCTTCATCCCCGTCCAACTCTAC
CTCGGCATCCGACACCGTACCTGGGGGTACCTCTTCGGCGCCATCTGCGG
CCTTATCCTCGAAGTCCTGGGCTACATAGCACGCATTTACATGCGACACA
ACCCATTCATTGACCGGTGGTTCATCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000317KJC3_000317Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000317-T1KJC3_000317-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000317-T1.cdsKJC3_000317-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000317-T1.exon2KJC3_000317-T1.exon2Aspergillus niger KJC3exon
KJC3_000317-T1.exon1KJC3_000317-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000317-T1.utr5p1KJC3_000317-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.2
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:525962..527236 -
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