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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:541641..542374+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000320-T1 ID=KJC3_000320-T1|Name=KJC3_000320-T1|organism=Aspergillus niger KJC3|type=mRNA|length=734bp|location=Sequence derived from alignment at ch1:541641..542374+ (Aspergillus niger KJC3)
ATGCAACTGGTGGACATGGAGCTACCCCTTGCTCTTGTTGAAACAAGCGT
CGGTATGTCCAATATATCGTTCTCTGGTGTTGAATAGATGACCTTTGCTA
ACCTAACTAAGCTCTCATGTCTGCAATAGCACAGCTCCTAATAGTATTCA
TCACTGGAAAGTACCTTGCAGCTATCATTCCGCTATGCCTGGCAGTATTC
TACTTCCTGCAAAAGTTCTACCTTCGGACATCACGACAGCTACGGTTCAT
GGAGCTTGAAGCCAAATCTCCCCTCTATTCCAACTTCATGGAGACCGTGA
ACGGACTGGTAACCATTCGTGCTTTCGGATGGCAGTCTAACTTTCTTACG
AATATATGTTGCCTAACAGATGCATCGCAACGGCCTTATTACCTGCTCTT
CGTTATCCAGCGATGGCTCACTCTCGTCCTTGACATGGTTGTGGCAGGAA
TGGCGACGCTGATTGTTGGCATTGCTGTCGGCGCTCCCGGGTCCATTGGA
GCCGGTTCTGCAGGACTGGGGTTGCTGAATATCATCAACGTGAGCGAAAG
TTTGAAGCAGCTAATTTCGAATTGGACTGTGTTAGAAACTTCAATTGGAG
CAGTGTCACGTGTCAGGCAGTTTCAGGATCAGGTTCAGCCTGAAGATAGG
CCGGATGGGCACATTGAAGTTCCAGCGCGCTGGCCGGAGAGAGGCGACGT
TAAGTTCTTCAATGTTTTTGCTTCTTACAGGTAA back to topCoding sequence (CDS) from alignment at ch1:541641..542374+ >KJC3_000320-T1 ID=KJC3_000320-T1|Name=KJC3_000320-T1|organism=Aspergillus niger KJC3|type=CDS|length=1350bp|location=Sequence derived from alignment at ch1:541641..542374+ (Aspergillus niger KJC3)
ATGCAACTGGTGGACATGGAGCTACCCCTTGCTCTTGTTGAAACAAGCGT
CGCTCTCATGTCTGCAATAGCACAGCTCCTAATAGTATTCATCACTGGAA
AGTACCTTGCAGCTATCATTCCGCTATGCCTGGCAGTATTCTACTTCCTG
CAAAAGTTCTACCTTCGGACATCACGACAGCTACGGTTCATGGAGCTTGA
AGCCAAATCTCCCCTCTATTCCAACTTCATGGAGACCGTGAACGGACTGG
TAACCATTCGTGCTTTCGGATGGCAGTCTAACTTTCTTACGAATATATGT
TGCCTAACAGATGCATCGCAACGGCCTTATTACCTGCTCTTCGTTATCCA
GCGATGGCTCACTCTCGTCCTTGACATGGTTGTGGCAGGAATGGCGACGC
TGATTGTTGGCATTGCTGTCGGCGCTCCCGGGTCCATTGGAGCCGGTTCT
GCAGGACTGGGGTTGCTGAATATCATCAACGTGAGCGAAAGTTTGAAGCA
GCTAATTTCGAATTGGACTGTGTTAGAAACTTCAATTGGAGCAGTGTCAC
GTGTCAGGCAGTTTCAGGATCAGGTTCAGCCTGAAGATAGGCCGGATGGG
CACATTGAAGTTCCAGCGCGCTGGCCGGAGAGAGGCGACGTTAAGTTCTT
CAATGTTTTTGCTTCTTACAGGTAAATGCAACTGGTGGACATGGAGCTAC
CCCTTGCTCTTGTTGAAACAAGCGTCGCTCTCATGTCTGCAATAGCACAG
CTCCTAATAGTATTCATCACTGGAAAGTACCTTGCAGCTATCATTCCGCT
ATGCCTGGCAGTATTCTACTTCCTGCAAAAGTTCTACCTTCGGACATCAC
GACAGCTACGGTTCATGGAGCTTGAAGCCAAATCTCCCCTCTATTCCAAC
TTCATGGAGACCGTGAACGGACTGGTAACCATTCGTGCTTTCGGATGGCA
GTCTAACTTTCTTACGAATATATGTTGCCTAACAGATGCATCGCAACGGC
CTTATTACCTGCTCTTCGTTATCCAGCGATGGCTCACTCTCGTCCTTGAC
ATGGTTGTGGCAGGAATGGCGACGCTGATTGTTGGCATTGCTGTCGGCGC
TCCCGGGTCCATTGGAGCCGGTTCTGCAGGACTGGGGTTGCTGAATATCA
TCAACGTGAGCGAAAGTTTGAAGCAGCTAATTTCGAATTGGACTGTGTTA
GAAACTTCAATTGGAGCAGTGTCACGTGTCAGGCAGTTTCAGGATCAGGT
TCAGCCTGAAGATAGGCCGGATGGGCACATTGAAGTTCCAGCGCGCTGGC
CGGAGAGAGGCGACGTTAAGTTCTTCAATGTTTTTGCTTCTTACAGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0042626 | ATPase-coupled transmembrane transporter activity |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.2 |
| DBxref | InterPro:IPR036640 |
| DBxref | InterPro:IPR011527 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:541641..542374 + |
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