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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:543590..544699+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000322-T1 ID=KJC3_000322-T1|Name=KJC3_000322-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1110bp|location=Sequence derived from alignment at ch1:543590..544699+ (Aspergillus niger KJC3)
ACGTCTCCCAACGGTTGAGCATAAAATATAAGATTTATGTTTTTTCTATA
CAATTCTCTACATTAGATCAGCATAACACTTCACTTTGGGTGTATCAAGA
CCATACTCAGCATGGCGTCCCACTATCTCAGCACGTCGCCGGATACCAAC
ATCCATTTCACCATTACTAAAGCACAGTCTCCATCTTCACCTACGCCCCT
TCTTCTCTTTCTCCACTACTGGGGTGGTTCGAGCGCAACATGGCACAAGC
AAACCTCACCTACTTCCCCACACACCCTGAGCAACATATACAACACTGTT
ACAGTTGATCTTCGCGGCTGGGGTCAGTCCACAGGACCTGCAGACTCCGG
CGCCAGCTCGAAAGACTACTCCATTACGCCCATGGCATCTGATATCGTCT
CCATGCTATCGCACCTCCAAAGCACCACCTCCCTCCTCGACAACGGCGTG
ATCCTAGTCGGTCACTCCATGGGAGCAAAGGTTACACTGGCTACTCTTGC
CAAGCTTTCCGACAATCAATTATCCCTCGTGAAGGGCCTCGTGCTTGTCG
CTCCGGCGCCCCCAACTCCATTGGTACTCCCTGCTGAGATGAGCGAACAG
CAACGCAAAGCATATGATAACGAAGGCTCCGTTCGGTGGACGGTCGAGAA
CGTTCTATCCAGCGTACAGAATATTTCGGGTTACGATATGGAGTTGATCG
TCAAGGATAGTCTGGCAGGAAGTACTCTTGCTCGGGACGGCTGGATTCTA
CATGGTATGCAAGAAGATATTACATCTGCTTTAGATGAGGTGTCTAGTCG
GCTTGAGGGCCGGAAGGTTAAGGTGGGTGTGCTTGCTGGGGCGGATGACA
TTGTTGAGAACAAGGATCGGGTCGAGAAGGAGGTTGCTGGGGCGCTTACC
AAAAGAGGCTTTGAGGTGCAGTTTGAGGTACTAGGGGGCGTAAAGCATTT
GATTCCATTGGAGAGCCCGGAGAGCGTGGCTAGGGCGATTCGTTCGACTG
TTGAATAGTGTTTATATTTAGATGTCTTGACTGAAGAAGACGAGATCCAG
TCAGTATTCTTGTAATATTCATTCTACCCATGTATGTAAAGCGAGGTGGC
AATGCAAATC back to topCoding sequence (CDS) from alignment at ch1:543590..544699+ >KJC3_000322-T1 ID=KJC3_000322-T1|Name=KJC3_000322-T1|organism=Aspergillus niger KJC3|type=CDS|length=897bp|location=Sequence derived from alignment at ch1:543590..544699+ (Aspergillus niger KJC3)
ATGGCGTCCCACTATCTCAGCACGTCGCCGGATACCAACATCCATTTCAC
CATTACTAAAGCACAGTCTCCATCTTCACCTACGCCCCTTCTTCTCTTTC
TCCACTACTGGGGTGGTTCGAGCGCAACATGGCACAAGCAAACCTCACCT
ACTTCCCCACACACCCTGAGCAACATATACAACACTGTTACAGTTGATCT
TCGCGGCTGGGGTCAGTCCACAGGACCTGCAGACTCCGGCGCCAGCTCGA
AAGACTACTCCATTACGCCCATGGCATCTGATATCGTCTCCATGCTATCG
CACCTCCAAAGCACCACCTCCCTCCTCGACAACGGCGTGATCCTAGTCGG
TCACTCCATGGGAGCAAAGGTTACACTGGCTACTCTTGCCAAGCTTTCCG
ACAATCAATTATCCCTCGTGAAGGGCCTCGTGCTTGTCGCTCCGGCGCCC
CCAACTCCATTGGTACTCCCTGCTGAGATGAGCGAACAGCAACGCAAAGC
ATATGATAACGAAGGCTCCGTTCGGTGGACGGTCGAGAACGTTCTATCCA
GCGTACAGAATATTTCGGGTTACGATATGGAGTTGATCGTCAAGGATAGT
CTGGCAGGAAGTACTCTTGCTCGGGACGGCTGGATTCTACATGGTATGCA
AGAAGATATTACATCTGCTTTAGATGAGGTGTCTAGTCGGCTTGAGGGCC
GGAAGGTTAAGGTGGGTGTGCTTGCTGGGGCGGATGACATTGTTGAGAAC
AAGGATCGGGTCGAGAAGGAGGTTGCTGGGGCGCTTACCAAAAGAGGCTT
TGAGGTGCAGTTTGAGGTACTAGGGGGCGTAAAGCATTTGATTCCATTGG
AGAGCCCGGAGAGCGTGGCTAGGGCGATTCGTTCGACTGTTGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000322-T1.utr5p1 | KJC3_000322-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000322-T1.utr3p1 | KJC3_000322-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.2 |
| Note | MEROPS:MER0036075 |
| Note | SMCOG1036:alpha/beta hydrolase fold protein |
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12146 |
| DBxref | PFAM:PF12697 |
| DBxref | PFAM:PF00561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:543590..544699 + |
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