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KJC3_000325-T1, KJC3_000325-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000325-T1
Unique NameKJC3_000325-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:553028..554075-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000325-T1 ID=KJC3_000325-T1|Name=KJC3_000325-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1048bp|location=Sequence derived from alignment at ch1:553028..554075- (Aspergillus niger KJC3)
GGTTCCGACAGTCATTGATTGAGCAACAGATTTCCTACCATAGGTTCCGA
CACTGCACTCTCTTTCATTAGTCGTTCATCATACGACCAAAGCCATCCAT
CCTTTCCAGCGCACATTGACACCACAACCATTTTCAAGGCAAAATGGACA
CAGCAGCCCTCCTCAACTCAATAACCTGGCAAAACACCCTGCTCTTCGCA
GGAGGGGCCTACATCATCCTAAACCTGAAGGGCCTCCCTTTTGTCTGGCA
CGTTCGTTCCCCTTCCCATTACCCTCACTTCAGACGCCTCGTAATTCAAT
TACTCAATCAACCCACCTCGACATACTAAAAAAACAATCAAACACACAGG
TCCGCCTCCTCAACTGCCTCAAAGAACACATCATCCTCAACCGTGCCCGT
AAAGTGGTCATAACCACCCATGGCCCCCAATCCCTCTTCTACCCGGTCAT
TACGACATCCTCCACCCCGCTACTCGAAATTGACTACAATATGCACAAGT
CCAACGCAACCTACTTCACCGACCTAGACATCAACCGCGTGCACTTGATC
TCCAGTTTATTCAAAGACCAGCTCGCGCTGGGGTTCTCCGGCGGAGAGCT
GAATATCGCACTCGGATCCACAGCATGTGTCTTTAAGAGAGAGATAAAAC
CATACCAAGCGTATGAGATCCATACGAGAGTGCTAAGTTGGGATGAGAAA
TGGGTGTATCTCGTTAGTCATTTTGTCAAGACCGGCGGGAAGAAAGACAA
AGGGGAGGTAGTGTTTGGGGGCAGCGCGACGGGTGTCAAGGATGAGAAGT
GTATTTTGGCTTCTGCTGTCACGAGGTATGTTTTCAAGAAGGGGAGAGTA
TCAGTGAGTCCGGAGACAGTGCTCTCGCGGGCTGGATTGTTGCCGGAGAA
AGGGGTCAAGATGAAGGAGGGGTTCTGGTCGTGGGAGCAGGTCGAGGAGG
AGAGGAAGAGGGGTTTGGAAGTTGCAAAGTCATTCCTTGCGTTGGATGGA
TTGCATGCGATGTTTAGGGGGGACGGGAAGGCGATTGGTGTATTCTGA
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Coding sequence (CDS) from alignment at ch1:553028..554075-

>KJC3_000325-T1 ID=KJC3_000325-T1|Name=KJC3_000325-T1|organism=Aspergillus niger KJC3|type=CDS|length=1614bp|location=Sequence derived from alignment at ch1:553028..554075- (Aspergillus niger KJC3)
GTCCGCCTCCTCAACTGCCTCAAAGAACACATCATCCTCAACCGTGCCCG
TAAAGTGGTCATAACCACCCATGGCCCCCAATCCCTCTTCTACCCGGTCA
TTACGACATCCTCCACCCCGCTACTCGAAATTGACTACAATATGCACAAG
TCCAACGCAACCTACTTCACCGACCTAGACATCAACCGCGTGCACTTGAT
CTCCAGTTTATTCAAAGACCAGCTCGCGCTGGGGTTCTCCGGCGGAGAGC
TGAATATCGCACTCGGATCCACAGCATGTGTCTTTAAGAGAGAGATAAAA
CCATACCAAGCGTATGAGATCCATACGAGAGTGCTAAGTTGGGATGAGAA
ATGGGTGTATCTCGTTAGTCATTTTGTCAAGACCGGCGGGAAGAAAGACA
AAGGGGAGGTAGTGTTTGGGGGCAGCGCGACGGGTGTCAAGGATGAGAAG
TGTATTTTGGCTTCTGCTGTCACGAGGTATGTTTTCAAGAAGGGGAGAGT
ATCAGTGAGTCCGGAGACAGTGCTCTCGCGGGCTGGATTGTTGCCGGAGA
AAGGGGTCAAGATGAAGGAGGGGTTCTGGTCGTGGGAGCAGGTCGAGGAG
GAGAGGAAGAGGGGTTTGGAAGTTGCAAAGTCATTCCTTGCGTTGGATGG
ATTGCATGCGATGTTTAGGGGGGACGGGAAGGCGATTGGTGTATTCTGAA
TGGACACAGCAGCCCTCCTCAACTCAATAACCTGGCAAAACACCCTGCTC
TTCGCAGGAGGGGCCTACATCATCCTAAACCTGAAGGGCCTCCCTTTTGT
CTGGCACGTCCGCCTCCTCAACTGCCTCAAAGAACACATCATCCTCAACC
GTGCCCGTAAAGTGGTCATAACCACCCATGGCCCCCAATCCCTCTTCTAC
CCGGTCATTACGACATCCTCCACCCCGCTACTCGAAATTGACTACAATAT
GCACAAGTCCAACGCAACCTACTTCACCGACCTAGACATCAACCGCGTGC
ACTTGATCTCCAGTTTATTCAAAGACCAGCTCGCGCTGGGGTTCTCCGGC
GGAGAGCTGAATATCGCACTCGGATCCACAGCATGTGTCTTTAAGAGAGA
GATAAAACCATACCAAGCGTATGAGATCCATACGAGAGTGCTAAGTTGGG
ATGAGAAATGGGTGTATCTCGTTAGTCATTTTGTCAAGACCGGCGGGAAG
AAAGACAAAGGGGAGGTAGTGTTTGGGGGCAGCGCGACGGGTGTCAAGGA
TGAGAAGTGTATTTTGGCTTCTGCTGTCACGAGGTATGTTTTCAAGAAGG
GGAGAGTATCAGTGAGTCCGGAGACAGTGCTCTCGCGGGCTGGATTGTTG
CCGGAGAAAGGGGTCAAGATGAAGGAGGGGTTCTGGTCGTGGGAGCAGGT
CGAGGAGGAGAGGAAGAGGGGTTTGGAAGTTGCAAAGTCATTCCTTGCGT
TGGATGGATTGCATGCGATGTTTAGGGGGGACGGGAAGGCGATTGGTGTA
TTCTGAATGGACACAGCAGCCCTCCTCAACTCAATAACCTGGCAAAACAC
CCTGCTCTTCGCAGGAGGGGCCTACATCATCCTAAACCTGAAGGGCCTCC
CTTTTGTCTGGCAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000325KJC3_000325Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000325-T1KJC3_000325-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000325-T1.cdsKJC3_000325-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000325-T1.exon2KJC3_000325-T1.exon2Aspergillus niger KJC3exon
KJC3_000325-T1.exon1KJC3_000325-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000325-T1.utr5p1KJC3_000325-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.2
NoteantiSMASH:Cluster_1.3
DBxrefInterPro:IPR029069
DBxrefPFAM:PF13279
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:553028..554075 -
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