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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:597116..598002- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000341-T1 ID=KJC3_000341-T1|Name=KJC3_000341-T1|organism=Aspergillus niger KJC3|type=mRNA|length=887bp|location=Sequence derived from alignment at ch1:597116..598002- (Aspergillus niger KJC3)
ATGGCTTCTACGCAGTGCGAGTTGTATATGTATACACCCAGCCTTGCATT
GGCGATTATCGGAGTCATTCTATTCTCTGCCTTGACCACGATCCACCTGT
ACCGTATGATTGAATCAAAAGCGTGGTATGGCATATTCTTCGTTCTTGGT
GGTCTGGGTAAGTTGTCCCTGTCATTGATGCCCTATCAATCTGTTAACAA
TATGTAGCAGAGTTAATCGGACATACGGCTCGATCCTTCTCGACCCAAGA
TGTCTGCGATAGAGGCGCGTACGGTGTGCAATCAGTCGCACTATTGATGG
GACCGACATTGATCATGTTTTCCGTCAACCTGACTCAGAGTGAGTTCGTC
AACGTGCTTGATGCCGAACAATTCTGTTTGCTCCCACTGGCGTGGCAGCG
GGGCGTTTATCCCGCTATGAACGCAATCTTGATGGTCATTCAGCTTGTTG
GAGGTTGTATGACCATCTCATCATCGAGTGAGACCGTGGCAACGGGAACA
AAGCTCGCTATCGCTCTCTTCGTGGTCCAGACAATTTTTTGGGGATTCAC
TATGGCAGAAAATATCTGCATGAGCTATCGCCTGGGTCGCCATCCCACAA
CTGCTAGCAGCTGCGTGTTAGCCAACTGGAAGACATGGAACCAATTGATC
CCGTTAGCAGGGTCTATCATTGCGACTGGACGCAACATAATGCGGCTGAC
AATGGCAGGTGGCATTGAGTTTCTCGTGGACTATGAATGGCCTTCGTATG
CATTTGATGGGTATCAGATGGTGGTGGTTCTGGGCGCTTGGGGGATTTGG
TACTTACCGGGGAAGTCTCGCGAACTCTCGACTCGAGTGCGTTATACGAA
CCTCACTCGGCTGGAGAGGGTCGTTGATGATGTTTAA back to topCoding sequence (CDS) from alignment at ch1:597116..598002- >KJC3_000341-T1 ID=KJC3_000341-T1|Name=KJC3_000341-T1|organism=Aspergillus niger KJC3|type=CDS|length=1674bp|location=Sequence derived from alignment at ch1:597116..598002- (Aspergillus niger KJC3)
CAGAGTTAATCGGACATACGGCTCGATCCTTCTCGACCCAAGATGTCTGC
GATAGAGGCGCGTACGGTGTGCAATCAGTCGCACTATTGATGGGACCGAC
ATTGATCATGTTTTCCGTCAACCTGACTCAGAGTGAGTTCGTCAACGTGC
TTGATGCCGAACAATTCTGTTTGCTCCCACTGGCGTGGCAGCGGGGCGTT
TATCCCGCTATGAACGCAATCTTGATGGTCATTCAGCTTGTTGGAGGTTG
TATGACCATCTCATCATCGAGTGAGACCGTGGCAACGGGAACAAAGCTCG
CTATCGCTCTCTTCGTGGTCCAGACAATTTTTTGGGGATTCACTATGGCA
GAAAATATCTGCATGAGCTATCGCCTGGGTCGCCATCCCACAACTGCTAG
CAGCTGCGTGTTAGCCAACTGGAAGACATGGAACCAATTGATCCCGTTAG
CAGGGTCTATCATTGCGACTGGACGCAACATAATGCGGCTGACAATGGCA
GGTGGCATTGAGTTTCTCGTGGACTATGAATGGCCTTCGTATGCATTTGA
TGGGTATCAGATGGTGGTGGTTCTGGGCGCTTGGGGGATTTGGTACTTAC
CGGGGAAGTCTCGCGAACTCTCGACTCGAGTGCGTTATACGAACCTCACT
CGGCTGGAGAGGGTCGTTGATGATGTTTAAATGGCTTCTACGCAGTGCGA
GTTGTATATGTATACACCCAGCCTTGCATTGGCGATTATCGGAGTCATTC
TATTCTCTGCCTTGACCACGATCCACCTGTACCGTATGATTGAATCAAAA
GCGTGGTATGGCATATTCTTCGTTCTTGGTGGTCTGGCAGAGTTAATCGG
ACATACGGCTCGATCCTTCTCGACCCAAGATGTCTGCGATAGAGGCGCGT
ACGGTGTGCAATCAGTCGCACTATTGATGGGACCGACATTGATCATGTTT
TCCGTCAACCTGACTCAGAGTGAGTTCGTCAACGTGCTTGATGCCGAACA
ATTCTGTTTGCTCCCACTGGCGTGGCAGCGGGGCGTTTATCCCGCTATGA
ACGCAATCTTGATGGTCATTCAGCTTGTTGGAGGTTGTATGACCATCTCA
TCATCGAGTGAGACCGTGGCAACGGGAACAAAGCTCGCTATCGCTCTCTT
CGTGGTCCAGACAATTTTTTGGGGATTCACTATGGCAGAAAATATCTGCA
TGAGCTATCGCCTGGGTCGCCATCCCACAACTGCTAGCAGCTGCGTGTTA
GCCAACTGGAAGACATGGAACCAATTGATCCCGTTAGCAGGGTCTATCAT
TGCGACTGGACGCAACATAATGCGGCTGACAATGGCAGGTGGCATTGAGT
TTCTCGTGGACTATGAATGGCCTTCGTATGCATTTGATGGGTATCAGATG
GTGGTGGTTCTGGGCGCTTGGGGGATTTGGTACTTACCGGGGAAGTCTCG
CGAACTCTCGACTCGAGTGCGTTATACGAACCTCACTCGGCTGGAGAGGG
TCGTTGATGATGTTTAAATGGCTTCTACGCAGTGCGAGTTGTATATGTAT
ACACCCAGCCTTGCATTGGCGATTATCGGAGTCATTCTATTCTCTGCCTT
GACCACGATCCACCTGTACCGTATGATTGAATCAAAAGCGTGGTATGGCA
TATTCTTCGTTCTTGGTGGTCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.3 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:597116..598002 - |
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