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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:619861..621253+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000349-T1 ID=KJC3_000349-T1|Name=KJC3_000349-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1393bp|location=Sequence derived from alignment at ch1:619861..621253+ (Aspergillus niger KJC3)
CCGGATTACATTATGATGCAGCTCTCTCTCTCCCTCCCCCCTTCCTCGGT
ACTCTCCATTCCAACATAATACTTAATCTCCGGAGGTTTTGTTTGTCCAA
CGTATCCAACCTACTTCACGTCTTGACACTTTATCTAGCATAGACTCGCA
CATCATCATGTCTGACTACACATACCAACATTTCAACGTCACATTCCCGC
CGGAACGTCAATATGTCGCCCACGTGGAGATCAACCGCGCCGACAAAATG
AATGCCTTCTTCGAAAGGTACCATCCCCCCTCTCCCTCCCCCTTTCTTCT
GCCTAAAACTAATATGTAATCCATCCTCCAGCATGTGGCTGGAACTCTCT
GCCATCTTCACCCGCCTCTCCTCGGACTCCTCCGTTCGCGCCATCGTCCT
CTCCGGTGCCGGCGACCGCGCATTCACCGCCGGCCTCGACGTCAAAGCCG
CCTCCGAGGGCCTCCTCTCCGACACCAACACCGCCAGCGATCCCGCCCGC
AAAGCTGCCCAGATGCGGCGCCACATTGACGAGTTGCAGGGATGCATCTC
GTCTATTGAAAAGTGCGAGAAACCGGTGATCGTGGCCTACCACGGTATCT
CCTATGGTCTCGCTGTTGACATCGGGGTGGCCGCTGATGTGCGGGTATGC
TCGGCGGATGTCCGCTTTGCCGTGAAAGAAGTAGACATTGGTCTGGCAGC
AGATGTCGGGACATTGAGTCGGTTGCCCAAGGTGGTTGGGAATTATGGAT
GGGTGAAAGAGGTGGCTTTGACGGCGAGGAACTTTGACGCGGAAGAAGCT
CTACGCGTGGGATACGTCAATCGCGTGTTCAAGAATAAAGAGGAGACAGT
CCGAGGCGCATTGGAACTGGCACAGTCAATAGGCACCAAGAGTCCTGTTG
CGGTGCAGGGGACCAAGGAATTGCTGAATTATTCGAGGGATCATACCGTT
CCGGAGGGTAAGTACTACTCCACAGTGTTTCGGAGTCCAGATGTATGTGG
ATGCTAATGCTGTATTTCACGCTATAGGACTGCGGTATACGGCTGTCTGG
AACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCTGCTGTCGGG
CATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAGCGTAGATGATCAC
TGCTGGTACTGATACTCAGTATGATGGTCTGCTTGAATTCAGGCTGCCTC
GAGTTTGACGGGTTCAAACAGTGGCGTGGCCAGTCCAGGCGATCCACCGC
AGATGCACCAACTAGAGAGAATATACCTCGTGAGCGTTGCATTGTCAGCG
TTTTAAACAGAACGATGCGAGTAGTAGAATTGACATAAGATAGAGTCGAG
ATTAGCAGTGAAGTTTAACTTATTATTTGAATTGTAGTATTCC back to topCoding sequence (CDS) from alignment at ch1:619861..621253+ >KJC3_000349-T1 ID=KJC3_000349-T1|Name=KJC3_000349-T1|organism=Aspergillus niger KJC3|type=CDS|length=2538bp|location=Sequence derived from alignment at ch1:619861..621253+ (Aspergillus niger KJC3)
ATGTCTGACTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACG
TCAATATGTCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCT
TCTTCGAAAGCATGTGGCTGGAACTCTCTGCCATCTTCACCCGCCTCTCC
TCGGACTCCTCCGTTCGCGCCATCGTCCTCTCCGGTGCCGGCGACCGCGC
ATTCACCGCCGGCCTCGACGTCAAAGCCGCCTCCGAGGGCCTCCTCTCCG
ACACCAACACCGCCAGCGATCCCGCCCGCAAAGCTGCCCAGATGCGGCGC
CACATTGACGAGTTGCAGGGATGCATCTCGTCTATTGAAAAGTGCGAGAA
ACCGGTGATCGTGGCCTACCACGGTATCTCCTATGGTCTCGCTGTTGACA
TCGGGGTGGCCGCTGATGTGCGGGTATGCTCGGCGGATGTCCGCTTTGCC
GTGAAAGAAGTAGACATTGGTCTGGCAGCAGATGTCGGGACATTGAGTCG
GTTGCCCAAGGTGGTTGGGAATTATGGATGGGTGAAAGAGGTGGCTTTGA
CGGCGAGGAACTTTGACGCGGAAGAAGCTCTACGCGTGGGATACGTCAAT
CGCGTGTTCAAGAATAAAGAGGAGACAGTCCGAGGCGCATTGGAACTGGC
ACAGTCAATAGGCACCAAGAGTCCTGTTGCGGTGCAGGGGACCAAGGAAT
TGCTGAATTATTCGAGGGATCATACCGTTCCGGAGGGACTGCGGTATACG
GCTGTCTGGAACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCT
GCTGTCGGGCATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAGATGT
CTGACTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACGTCAA
TATGTCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCTTCTT
CGAAAGCATGTGGCTGGAACTCTCTGCCATCTTCACCCGCCTCTCCTCGG
ACTCCTCCGTTCGCGCCATCGTCCTCTCCGGTGCCGGCGACCGCGCATTC
ACCGCCGGCCTCGACGTCAAAGCCGCCTCCGAGGGCCTCCTCTCCGACAC
CAACACCGCCAGCGATCCCGCCCGCAAAGCTGCCCAGATGCGGCGCCACA
TTGACGAGTTGCAGGGATGCATCTCGTCTATTGAAAAGTGCGAGAAACCG
GTGATCGTGGCCTACCACGGTATCTCCTATGGTCTCGCTGTTGACATCGG
GGTGGCCGCTGATGTGCGGGTATGCTCGGCGGATGTCCGCTTTGCCGTGA
AAGAAGTAGACATTGGTCTGGCAGCAGATGTCGGGACATTGAGTCGGTTG
CCCAAGGTGGTTGGGAATTATGGATGGGTGAAAGAGGTGGCTTTGACGGC
GAGGAACTTTGACGCGGAAGAAGCTCTACGCGTGGGATACGTCAATCGCG
TGTTCAAGAATAAAGAGGAGACAGTCCGAGGCGCATTGGAACTGGCACAG
TCAATAGGCACCAAGAGTCCTGTTGCGGTGCAGGGGACCAAGGAATTGCT
GAATTATTCGAGGGATCATACCGTTCCGGAGGGACTGCGGTATACGGCTG
TCTGGAACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCTGCTG
TCGGGCATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAGATGTCTGA
CTACACATACCAACATTTCAACGTCACATTCCCGCCGGAACGTCAATATG
TCGCCCACGTGGAGATCAACCGCGCCGACAAAATGAATGCCTTCTTCGAA
AGCATGTGGCTGGAACTCTCTGCCATCTTCACCCGCCTCTCCTCGGACTC
CTCCGTTCGCGCCATCGTCCTCTCCGGTGCCGGCGACCGCGCATTCACCG
CCGGCCTCGACGTCAAAGCCGCCTCCGAGGGCCTCCTCTCCGACACCAAC
ACCGCCAGCGATCCCGCCCGCAAAGCTGCCCAGATGCGGCGCCACATTGA
CGAGTTGCAGGGATGCATCTCGTCTATTGAAAAGTGCGAGAAACCGGTGA
TCGTGGCCTACCACGGTATCTCCTATGGTCTCGCTGTTGACATCGGGGTG
GCCGCTGATGTGCGGGTATGCTCGGCGGATGTCCGCTTTGCCGTGAAAGA
AGTAGACATTGGTCTGGCAGCAGATGTCGGGACATTGAGTCGGTTGCCCA
AGGTGGTTGGGAATTATGGATGGGTGAAAGAGGTGGCTTTGACGGCGAGG
AACTTTGACGCGGAAGAAGCTCTACGCGTGGGATACGTCAATCGCGTGTT
CAAGAATAAAGAGGAGACAGTCCGAGGCGCATTGGAACTGGCACAGTCAA
TAGGCACCAAGAGTCCTGTTGCGGTGCAGGGGACCAAGGAATTGCTGAAT
TATTCGAGGGATCATACCGTTCCGGAGGGACTGCGGTATACGGCTGTCTG
GAACAGCGCAATGCTACAGACCAAGGACGTCACTGCTGCGCTGCTGTCGG
GCATCCAGAAGAGAAAGCCGACGTTCGAGAAGTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000349-T1.utr3p1 | KJC3_000349-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029045 |
| DBxref | InterPro:IPR001753 |
| DBxref | InterPro:IPR014748 |
| DBxref | PFAM:PF16113 |
| DBxref | PFAM:PF00378 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:619861..621253 + |
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